RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 RBM6P78332 1123 aaKnown RBP10.46□□□□□ -0.73
NPAS3-213ENST00000552874 EIF4A2Q14240 407 aaKnown RBP10.46□□□□□ -0.73
NPAS3-213ENST00000552874 CARD10Q9BWT7 1032 aa10.46□□□□□ -0.73
NPAS3-213ENST00000552874 PRKRIP1Q9H875 184 aaPredicted RBP10.46□□□□□ -0.73
NPAS3-213ENST00000552874 QTRT2Q9H974 415 aaKnown RBP10.46□□□□□ -0.73
NPAS3-213ENST00000552874 PAPPAQ13219 1627 aa10.46□□□□□ -0.74
NPAS3-213ENST00000552874 BTAF1O14981 1849 aa10.46□□□□□ -0.74
NPAS3-213ENST00000552874 RREB1Q92766 1687 aa10.45□□□□□ -0.74
NPAS3-213ENST00000552874 ZBTB7CA1YPR0 619 aa10.45□□□□□ -0.74
NPAS3-213ENST00000552874 BARGINQ6ZT62 677 aa10.45□□□□□ -0.74
NPAS3-213ENST00000552874 STRN4Q9NRL3 753 aa10.45□□□□□ -0.74
NPAS3-213ENST00000552874 MYBBP1AQ9BQG0 1328 aaKnown RBP10.44□□□□□ -0.74
NPAS3-213ENST00000552874 IL13P35225 146 aa10.44□□□□□ -0.74
NPAS3-213ENST00000552874 AMPHP49418 695 aa10.44□□□□□ -0.74
NPAS3-213ENST00000552874 MTHFSP49914 203 aa10.44□□□□□ -0.74
NPAS3-213ENST00000552874 NBPF6Q5VWK0 638 aa10.44□□□□□ -0.74
NPAS3-213ENST00000552874 ILDR2Q71H61 639 aa10.44□□□□□ -0.74
NPAS3-213ENST00000552874 NBPF4Q96M43 638 aa10.44□□□□□ -0.74
NPAS3-213ENST00000552874 LY75O60449 1722 aa10.44□□□□□ -0.74
NPAS3-213ENST00000552874 KAT6BQ8WYB5 2073 aa10.43□□□□□ -0.74
NPAS3-213ENST00000552874 BCL9O00512 1426 aa10.43□□□□□ -0.74
NPAS3-213ENST00000552874 RALBP1Q15311 655 aa10.43□□□□□ -0.74
NPAS3-213ENST00000552874 EYA1Q99502 592 aa10.43□□□□□ -0.74
NPAS3-213ENST00000552874 THRAP3Q9Y2W1 955 aaKnown RBP10.43□□□□□ -0.74
NPAS3-213ENST00000552874 UBR2Q8IWV8 1755 aa10.42□□□□□ -0.74
NPAS3-213ENST00000552874 TCP11L2Q8N4U5 519 aa10.42□□□□□ -0.74
NPAS3-213ENST00000552874 ZBTB12Q9Y330 459 aaPredicted RBP10.42□□□□□ -0.74
NPAS3-213ENST00000552874 CICQ96RK0 1608 aaPredicted RBP10.42□□□□□ -0.74
NPAS3-213ENST00000552874 MRC1P22897 1456 aa10.42□□□□□ -0.74
NPAS3-213ENST00000552874 RXRBP28702 533 aa10.41□□□□□ -0.74
NPAS3-213ENST00000552874 FAM98CQ17RN3 349 aaKnown RBP10.41□□□□□ -0.74
NPAS3-213ENST00000552874 TOM1L2Q6ZVM7 507 aa10.41□□□□□ -0.74
NPAS3-213ENST00000552874 USHBP1Q8N6Y0 703 aa10.41□□□□□ -0.74
NPAS3-213ENST00000552874 TAF1LQ8IZX4 1826 aa10.41□□□□□ -0.74
NPAS3-213ENST00000552874 NUP188Q5SRE5 1749 aa10.41□□□□□ -0.74
NPAS3-213ENST00000552874 CNGB1Q14028 1251 aaPredicted RBP10.4□□□□□ -0.74
NPAS3-213ENST00000552874 AEBP1Q8IUX7 1158 aa10.4□□□□□ -0.74
NPAS3-213ENST00000552874 LTV1Q96GA3 475 aaPredicted RBP10.4□□□□□ -0.74
NPAS3-213ENST00000552874 TUBGCP6Q96RT7 1819 aa10.4□□□□□ -0.75
NPAS3-213ENST00000552874 KDM3BQ7LBC6 1761 aa10.39□□□□□ -0.75
NPAS3-213ENST00000552874 PPM1GO15355 546 aaPredicted RBP10.39□□□□□ -0.75
NPAS3-213ENST00000552874 SEPT12Q8IYM1 358 aa10.39□□□□□ -0.75
NPAS3-213ENST00000552874 NLRP2Q9NX02 1062 aa10.39□□□□□ -0.75
NPAS3-213ENST00000552874 ZNF831Q5JPB2 1677 aa10.38□□□□□ -0.75
NPAS3-213ENST00000552874 CSB-PGBD3P0DP91 1061 aa10.38□□□□□ -0.75
NPAS3-213ENST00000552874 EVA1CP58658 441 aa10.38□□□□□ -0.75
NPAS3-213ENST00000552874 CCDC184Q52MB2 194 aa10.38□□□□□ -0.75
NPAS3-213ENST00000552874 KDM6AO15550 1401 aaPredicted RBP10.37□□□□□ -0.75
NPAS3-213ENST00000552874 DIAPH1O60610 1272 aaKnown RBP10.37□□□□□ -0.75
NPAS3-213ENST00000552874 IL2RBP14784 551 aa10.37□□□□□ -0.75
NPAS3-213ENST00000552874 COL5A3P25940 1745 aaPredicted RBP10.37□□□□□ -0.75
NPAS3-213ENST00000552874 CDCA7Q9BWT1 371 aaPredicted RBP10.37□□□□□ -0.75
NPAS3-213ENST00000552874 USP35Q9P2H5 1018 aa10.37□□□□□ -0.75
NPAS3-213ENST00000552874 CCDC9Q9Y3X0 531 aaKnown RBP10.37□□□□□ -0.75
NPAS3-213ENST00000552874 TJP1Q07157 1748 aa10.36□□□□□ -0.75
NPAS3-213ENST00000552874 RSPH6AQ9H0K4 717 aa10.36□□□□□ -0.75
NPAS3-213ENST00000552874 MARCH10Q8NA82 808 aaPredicted RBP10.35□□□□□ -0.75
NPAS3-213ENST00000552874 QSER1Q2KHR3 1735 aa10.35□□□□□ -0.75
NPAS3-213ENST00000552874 C5P01031 1676 aa10.34□□□□□ -0.75
NPAS3-213ENST00000552874 SULT6B1Q6IMI4 303 aa10.34□□□□□ -0.75
NPAS3-213ENST00000552874 CYP27B1O15528 508 aa10.33□□□□□ -0.76
NPAS3-213ENST00000552874 DDB1Q16531 1140 aa10.33□□□□□ -0.76
NPAS3-213ENST00000552874 KRT27Q7Z3Y8 459 aa10.33□□□□□ -0.76
NPAS3-213ENST00000552874 CFAP53Q96M91 514 aa10.33□□□□□ -0.76
NPAS3-213ENST00000552874 PLEKHF1Q96S99 279 aa10.33□□□□□ -0.76
NPAS3-213ENST00000552874 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.33□□□□□ -0.76
NPAS3-213ENST00000552874 LAMB4A4D0S4 1761 aa10.33□□□□□ -0.76
NPAS3-213ENST00000552874 PCDH11XQ9BZA7 1347 aa10.33□□□□□ -0.76
NPAS3-213ENST00000552874 PCDH11YQ9BZA8 1340 aa10.33□□□□□ -0.76
NPAS3-213ENST00000552874 HMOX1P09601 288 aa10.32□□□□□ -0.76
NPAS3-213ENST00000552874 TATP17735 454 aaPredicted RBP10.31□□□□□ -0.76
NPAS3-213ENST00000552874 FAM182BQ5T319 152 aa10.31□□□□□ -0.76
NPAS3-213ENST00000552874 RAPGEF4Q8WZA2 1011 aa10.31□□□□□ -0.76
NPAS3-213ENST00000552874 MYH14Q7Z406 1995 aaKnown RBP10.31□□□□□ -0.76
NPAS3-213ENST00000552874 UBR3Q6ZT12 1888 aa10.31□□□□□ -0.76
NPAS3-213ENST00000552874 KCPQ6ZWJ8 1503 aa10.3□□□□□ -0.76
NPAS3-213ENST00000552874 ANP32CO43423 234 aa10.3□□□□□ -0.76
NPAS3-213ENST00000552874 PHKG2P15735 406 aa10.3□□□□□ -0.76
NPAS3-213ENST00000552874 NKX1-1Q15270 411 aaPredicted RBP10.3□□□□□ -0.76
NPAS3-213ENST00000552874 ZCRB1Q8TBF4 217 aaKnown RBP10.3□□□□□ -0.76
NPAS3-213ENST00000552874 PHACTR3Q96KR7 559 aa10.3□□□□□ -0.76
NPAS3-213ENST00000552874 CEMIPQ8WUJ3 1361 aa10.29□□□□□ -0.76
NPAS3-213ENST00000552874 U2SURPO15042 1029 aaKnown RBP10.29□□□□□ -0.76
NPAS3-213ENST00000552874 FCHSD2O94868 740 aa10.29□□□□□ -0.76
NPAS3-213ENST00000552874 PRKAR2BP31323 418 aa10.29□□□□□ -0.76
NPAS3-213ENST00000552874 DIEXFQ68CQ4 756 aaKnown RBP10.29□□□□□ -0.76
NPAS3-213ENST00000552874 PTF1AQ7RTS3 328 aa10.29□□□□□ -0.76
NPAS3-213ENST00000552874 PNISRQ8TF01 805 aaKnown RBP10.29□□□□□ -0.76
NPAS3-213ENST00000552874 AKT1S1Q96B36 256 aa10.29□□□□□ -0.76
NPAS3-213ENST00000552874 COL24A1Q17RW2 1714 aa10.29□□□□□ -0.76
NPAS3-213ENST00000552874 MAP3K5Q99683 1374 aa10.28□□□□□ -0.76
NPAS3-213ENST00000552874 C4AP0C0L4 1744 aa10.28□□□□□ -0.76
NPAS3-213ENST00000552874 C4BP0C0L5 1744 aa10.28□□□□□ -0.76
NPAS3-213ENST00000552874 EXOC5O00471 708 aa10.28□□□□□ -0.76
NPAS3-213ENST00000552874 U2AF1L5P0DN76 240 aaPredicted RBP10.28□□□□□ -0.76
NPAS3-213ENST00000552874 U2AF1Q01081 240 aaKnown RBP eCLIP10.28□□□□□ -0.76
NPAS3-213ENST00000552874 MTHFSDQ2M296 383 aaKnown RBP10.28□□□□□ -0.76
NPAS3-213ENST00000552874 CASZ1Q86V15 1759 aa10.28□□□□□ -0.76
NPAS3-213ENST00000552874 SRCAPQ6ZRS2 3230 aa10.27□□□□□ -0.77
NPAS3-213ENST00000552874 UPF1Q92900 1129 aaKnown RBP eCLIP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms