RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 THRAP3Q9Y2W1 955 aaKnown RBP12.4□□□□□ -0.42
CCDC59-207ENST00000552606 CCDC9Q9Y3X0 531 aaKnown RBP12.4□□□□□ -0.42
CCDC59-207ENST00000552606 OVOS2A0A0G2JMS6 1433 aa12.39□□□□□ -0.43
CCDC59-207ENST00000552606 CSB-PGBD3P0DP91 1061 aa12.39□□□□□ -0.43
CCDC59-207ENST00000552606 EIF4A2Q14240 407 aaKnown RBP12.39□□□□□ -0.43
CCDC59-207ENST00000552606 FAM98CQ17RN3 349 aaKnown RBP12.39□□□□□ -0.43
CCDC59-207ENST00000552606 REM2Q8IYK8 340 aaPredicted RBP12.39□□□□□ -0.43
CCDC59-207ENST00000552606 NHSQ6T4R5 1651 aa12.38□□□□□ -0.43
CCDC59-207ENST00000552606 IGSF1Q8N6C5 1336 aa12.38□□□□□ -0.43
CCDC59-207ENST00000552606 PPM1GO15355 546 aaPredicted RBP12.38□□□□□ -0.43
CCDC59-207ENST00000552606 PPP2R1AP30153 589 aa12.38□□□□□ -0.43
CCDC59-207ENST00000552606 MTHFSP49914 203 aa12.38□□□□□ -0.43
CCDC59-207ENST00000552606 CNGB1Q14028 1251 aaPredicted RBP12.38□□□□□ -0.43
CCDC59-207ENST00000552606 LTV1Q96GA3 475 aaPredicted RBP12.38□□□□□ -0.43
CCDC59-207ENST00000552606 USP35Q9P2H5 1018 aa12.38□□□□□ -0.43
CCDC59-207ENST00000552606 ITGB4P16144 1822 aa12.37□□□□□ -0.43
CCDC59-207ENST00000552606 NBPF6Q5VWK0 638 aa12.37□□□□□ -0.43
CCDC59-207ENST00000552606 SEPT12Q8IYM1 358 aa12.37□□□□□ -0.43
CCDC59-207ENST00000552606 NBPF4Q96M43 638 aa12.37□□□□□ -0.43
CCDC59-207ENST00000552606 NLRP2Q9NX02 1062 aa12.37□□□□□ -0.43
CCDC59-207ENST00000552606 ZBTB12Q9Y330 459 aaPredicted RBP12.37□□□□□ -0.43
CCDC59-207ENST00000552606 KDRP35968 1356 aa12.37□□□□□ -0.43
CCDC59-207ENST00000552606 PLEKHG2Q9H7P9 1386 aa12.37□□□□□ -0.43
CCDC59-207ENST00000552606 DLG5Q8TDM6 1919 aa12.37□□□□□ -0.43
CCDC59-207ENST00000552606 RGPD3A6NKT7 1758 aaPredicted RBP12.36□□□□□ -0.43
CCDC59-207ENST00000552606 RGPD4Q7Z3J3 1758 aa12.36□□□□□ -0.43
CCDC59-207ENST00000552606 SCN11AQ9UI33 1791 aa12.36□□□□□ -0.43
CCDC59-207ENST00000552606 ADAMTS7Q9UKP4 1686 aa12.36□□□□□ -0.43
CCDC59-207ENST00000552606 IL13P35225 146 aa12.35□□□□□ -0.43
CCDC59-207ENST00000552606 RALBP1Q15311 655 aa12.35□□□□□ -0.43
CCDC59-207ENST00000552606 USHBP1Q8N6Y0 703 aa12.35□□□□□ -0.43
CCDC59-207ENST00000552606 EYA1Q99502 592 aa12.35□□□□□ -0.43
CCDC59-207ENST00000552606 PRKRIP1Q9H875 184 aaPredicted RBP12.35□□□□□ -0.43
CCDC59-207ENST00000552606 BTAF1O14981 1849 aa12.34□□□□□ -0.43
CCDC59-207ENST00000552606 MYBBP1AQ9BQG0 1328 aaKnown RBP12.34□□□□□ -0.43
CCDC59-207ENST00000552606 IL2RBP14784 551 aa12.33□□□□□ -0.44
CCDC59-207ENST00000552606 CDCA7Q9BWT1 371 aaPredicted RBP12.33□□□□□ -0.44
CCDC59-207ENST00000552606 BCL9O00512 1426 aa12.33□□□□□ -0.44
CCDC59-207ENST00000552606 SIPA1L3O60292 1781 aaPredicted RBP12.32□□□□□ -0.44
CCDC59-207ENST00000552606 RREB1Q92766 1687 aa12.32□□□□□ -0.44
CCDC59-207ENST00000552606 DIAPH1O60610 1272 aaKnown RBP12.31□□□□□ -0.44
CCDC59-207ENST00000552606 KRT27Q7Z3Y8 459 aa12.31□□□□□ -0.44
CCDC59-207ENST00000552606 A0A0G2JS52 829 aa12.3□□□□□ -0.44
CCDC59-207ENST00000552606 MYT1Q01538 1121 aa12.3□□□□□ -0.44
CCDC59-207ENST00000552606 AEBP1Q8IUX7 1158 aa12.3□□□□□ -0.44
CCDC59-207ENST00000552606 LY75O60449 1722 aa12.3□□□□□ -0.44
CCDC59-207ENST00000552606 DDB1Q16531 1140 aa12.29□□□□□ -0.44
CCDC59-207ENST00000552606 CFAP53Q96M91 514 aa12.29□□□□□ -0.44
CCDC59-207ENST00000552606 KAT6BQ8WYB5 2073 aa12.29□□□□□ -0.44
CCDC59-207ENST00000552606 PAPPAQ13219 1627 aa12.29□□□□□ -0.44
CCDC59-207ENST00000552606 NUP188Q5SRE5 1749 aa12.28□□□□□ -0.44
CCDC59-207ENST00000552606 PITPNM1O00562 1244 aa12.27□□□□□ -0.45
CCDC59-207ENST00000552606 MARCH10Q8NA82 808 aaPredicted RBP12.27□□□□□ -0.45
CCDC59-207ENST00000552606 RAPGEF4Q8WZA2 1011 aa12.27□□□□□ -0.45
CCDC59-207ENST00000552606 MRC1P22897 1456 aa12.27□□□□□ -0.45
CCDC59-207ENST00000552606 TATP17735 454 aaPredicted RBP12.26□□□□□ -0.45
CCDC59-207ENST00000552606 FAM182BQ5T319 152 aa12.26□□□□□ -0.45
CCDC59-207ENST00000552606 SULT6B1Q6IMI4 303 aa12.26□□□□□ -0.45
CCDC59-207ENST00000552606 PCDH11XQ9BZA7 1347 aa12.26□□□□□ -0.45
CCDC59-207ENST00000552606 PCDH11YQ9BZA8 1340 aa12.26□□□□□ -0.45
CCDC59-207ENST00000552606 EXOC5O00471 708 aa12.25□□□□□ -0.45
CCDC59-207ENST00000552606 RSPH6AQ9H0K4 717 aa12.25□□□□□ -0.45
CCDC59-207ENST00000552606 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.25□□□□□ -0.451e-6■■■■□ 24.5
CCDC59-207ENST00000552606 UBR2Q8IWV8 1755 aa12.25□□□□□ -0.45
CCDC59-207ENST00000552606 TAF1LQ8IZX4 1826 aa12.25□□□□□ -0.45
CCDC59-207ENST00000552606 U2SURPO15042 1029 aaKnown RBP12.24□□□□□ -0.45
CCDC59-207ENST00000552606 CYP27B1O15528 508 aa12.24□□□□□ -0.45
CCDC59-207ENST00000552606 KDM6AO15550 1401 aaPredicted RBP12.24□□□□□ -0.45
CCDC59-207ENST00000552606 HMOX1P09601 288 aa12.24□□□□□ -0.45
CCDC59-207ENST00000552606 FXR2P51116 673 aaKnown RBP eCLIP12.24□□□□□ -0.45
CCDC59-207ENST00000552606 PDE3BQ13370 1112 aa12.24□□□□□ -0.45
CCDC59-207ENST00000552606 ZCRB1Q8TBF4 217 aaKnown RBP12.24□□□□□ -0.45
CCDC59-207ENST00000552606 CICQ96RK0 1608 aaPredicted RBP12.24□□□□□ -0.45
CCDC59-207ENST00000552606 ZNF831Q5JPB2 1677 aa12.23□□□□□ -0.45
CCDC59-207ENST00000552606 ANP32CO43423 234 aa12.23□□□□□ -0.45
CCDC59-207ENST00000552606 FAM196AQ6ZSG2 479 aa12.23□□□□□ -0.45
CCDC59-207ENST00000552606 ATF5Q9Y2D1 282 aaPredicted RBP12.23□□□□□ -0.45
CCDC59-207ENST00000552606 SOCS7O14512 581 aa12.22□□□□□ -0.45
CCDC59-207ENST00000552606 CCDC184Q52MB2 194 aa12.22□□□□□ -0.45
CCDC59-207ENST00000552606 UPF1Q92900 1129 aaKnown RBP eCLIP12.22□□□□□ -0.45
CCDC59-207ENST00000552606 NUDCQ9Y266 331 aa12.22□□□□□ -0.45
CCDC59-207ENST00000552606 TUBGCP6Q96RT7 1819 aa12.22□□□□□ -0.45
CCDC59-207ENST00000552606 KDM3BQ7LBC6 1761 aa12.21□□□□□ -0.45
CCDC59-207ENST00000552606 COL5A3P25940 1745 aaPredicted RBP12.21□□□□□ -0.45
CCDC59-207ENST00000552606 U2AF1L5P0DN76 240 aaPredicted RBP12.21□□□□□ -0.45
CCDC59-207ENST00000552606 U2AF1Q01081 240 aaKnown RBP eCLIP12.21□□□□□ -0.45
CCDC59-207ENST00000552606 NKX1-1Q15270 411 aaPredicted RBP12.21□□□□□ -0.45
CCDC59-207ENST00000552606 SPG7Q9UQ90 795 aa12.21□□□□□ -0.45
CCDC59-207ENST00000552606 C5P01031 1676 aa12.21□□□□□ -0.45
CCDC59-207ENST00000552606 PHKG2P15735 406 aa12.2□□□□□ -0.46
CCDC59-207ENST00000552606 PRKAR2BP31323 418 aa12.2□□□□□ -0.46
CCDC59-207ENST00000552606 AMOTQ4VCS5 1084 aa12.2□□□□□ -0.46
CCDC59-207ENST00000552606 FCHSD2O94868 740 aa12.19□□□□□ -0.46
CCDC59-207ENST00000552606 PLEKHO1Q53GL0 409 aaPredicted RBP12.19□□□□□ -0.46
CCDC59-207ENST00000552606 DDX54Q8TDD1 881 aaKnown RBP12.19□□□□□ -0.46
CCDC59-207ENST00000552606 PLEKHF1Q96S99 279 aa12.19□□□□□ -0.46
CCDC59-207ENST00000552606 TJP1Q07157 1748 aa12.19□□□□□ -0.46
CCDC59-207ENST00000552606 QSER1Q2KHR3 1735 aa12.19□□□□□ -0.46
CCDC59-207ENST00000552606 MAP3K5Q99683 1374 aa12.18□□□□□ -0.46
CCDC59-207ENST00000552606 MTHFSDQ2M296 383 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms