RNA–Protein interactions for RNA: ENST00000552561.5

TMEM106C-220, Transcript of transmembrane protein 106C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM106C, Length 810 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-220ENST00000552561 BCL11BQ9C0K0 894 aaPredicted RBP6.36□□□□□ -1.39
TMEM106C-220ENST00000552561 STRN4Q9NRL3 753 aa6.36□□□□□ -1.39
TMEM106C-220ENST00000552561 AXIN2Q9Y2T1 843 aa6.36□□□□□ -1.39
TMEM106C-220ENST00000552561 CASZ1Q86V15 1759 aa6.36□□□□□ -1.39
TMEM106C-220ENST00000552561 TNS2Q63HR2 1409 aa6.35□□□□□ -1.39
TMEM106C-220ENST00000552561 EDC4Q6P2E9 1401 aaKnown RBP6.35□□□□□ -1.39
TMEM106C-220ENST00000552561 ERBB3P21860 1342 aa6.35□□□□□ -1.39
TMEM106C-220ENST00000552561 FAM182BQ5T319 152 aa6.35□□□□□ -1.39
TMEM106C-220ENST00000552561 NUTM2GQ5VZR2 741 aa6.35□□□□□ -1.39
TMEM106C-220ENST00000552561 FHDC1Q9C0D6 1143 aaPredicted RBP6.35□□□□□ -1.39
TMEM106C-220ENST00000552561 CREBZFQ9NS37 354 aa6.35□□□□□ -1.39
TMEM106C-220ENST00000552561 KTN1Q86UP2 1357 aaKnown RBP6.34□□□□□ -1.39
TMEM106C-220ENST00000552561 FAM208AQ9UK61 1670 aaKnown RBP6.34□□□□□ -1.39
TMEM106C-220ENST00000552561 DDB1Q16531 1140 aa6.34□□□□□ -1.39
TMEM106C-220ENST00000552561 PROM2Q8N271 834 aa6.34□□□□□ -1.39
TMEM106C-220ENST00000552561 ZNF579Q8NAF0 562 aaKnown RBP6.34□□□□□ -1.39
TMEM106C-220ENST00000552561 TESK2Q96S53 571 aa6.34□□□□□ -1.39
TMEM106C-220ENST00000552561 SIN3AQ96ST3 1273 aa6.34□□□□□ -1.39
TMEM106C-220ENST00000552561 SYT17Q9BSW7 474 aa6.34□□□□□ -1.39
TMEM106C-220ENST00000552561 PAPPAQ13219 1627 aa6.34□□□□□ -1.39
TMEM106C-220ENST00000552561 COL24A1Q17RW2 1714 aa6.33□□□□□ -1.4
TMEM106C-220ENST00000552561 NHSQ6T4R5 1651 aa6.33□□□□□ -1.4
TMEM106C-220ENST00000552561 GRIN3BO60391 1043 aa6.33□□□□□ -1.4
TMEM106C-220ENST00000552561 MARCH10Q8NA82 808 aaPredicted RBP6.33□□□□□ -1.4
TMEM106C-220ENST00000552561 RGPD5Q99666 1765 aa6.33□□□□□ -1.4
TMEM106C-220ENST00000552561 ATP10DQ9P241 1426 aa6.33□□□□□ -1.4
TMEM106C-220ENST00000552561 MAP3K5Q99683 1374 aa6.32□□□□□ -1.4
TMEM106C-220ENST00000552561 SPDYE4A6NLX3 237 aa6.32□□□□□ -1.4
TMEM106C-220ENST00000552561 ZBTB7AO95365 584 aa6.32□□□□□ -1.4
TMEM106C-220ENST00000552561 TOM1L2Q6ZVM7 507 aa6.32□□□□□ -1.4
TMEM106C-220ENST00000552561 KLHL34Q8N239 644 aa6.32□□□□□ -1.4
TMEM106C-220ENST00000552561 SGIP1Q9BQI5 828 aa6.32□□□□□ -1.4
TMEM106C-220ENST00000552561 PCGF6Q9BYE7 350 aa6.32□□□□□ -1.4
TMEM106C-220ENST00000552561 MTFR1LQ9H019 292 aa6.32□□□□□ -1.4
TMEM106C-220ENST00000552561 USP35Q9P2H5 1018 aa6.32□□□□□ -1.4
TMEM106C-220ENST00000552561 QSER1Q2KHR3 1735 aa6.32□□□□□ -1.4
TMEM106C-220ENST00000552561 A0A1W2PP64 1363 aa6.31□□□□□ -1.4
TMEM106C-220ENST00000552561 KIF24Q5T7B8 1368 aa6.31□□□□□ -1.4
TMEM106C-220ENST00000552561 PLEKHG5O94827 1062 aa6.31□□□□□ -1.4
TMEM106C-220ENST00000552561 TRIM26Q12899 539 aaPredicted RBP6.31□□□□□ -1.4
TMEM106C-220ENST00000552561 LCE2DQ5TA82 110 aaPredicted RBP6.31□□□□□ -1.4
TMEM106C-220ENST00000552561 DCBLD2Q96PD2 775 aa6.31□□□□□ -1.4
TMEM106C-220ENST00000552561 ARXQ96QS3 562 aa6.31□□□□□ -1.4
TMEM106C-220ENST00000552561 ANO8Q9HCE9 1232 aaPredicted RBP6.31□□□□□ -1.4
TMEM106C-220ENST00000552561 STK32BQ9NY57 414 aa6.31□□□□□ -1.4
TMEM106C-220ENST00000552561 WWC3Q9ULE0 1092 aa6.31□□□□□ -1.4
TMEM106C-220ENST00000552561 LTN1O94822 1766 aa6.31□□□□□ -1.4
TMEM106C-220ENST00000552561 RTL1A6NKG5 1358 aa6.31□□□□□ -1.4
TMEM106C-220ENST00000552561 PLEKHG2Q9H7P9 1386 aa6.31□□□□□ -1.4
TMEM106C-220ENST00000552561 WDR90Q96KV7 1748 aa6.3□□□□□ -1.4
TMEM106C-220ENST00000552561 EXOC5O00471 708 aa6.3□□□□□ -1.4
TMEM106C-220ENST00000552561 TXNRD1Q16881 649 aa6.3□□□□□ -1.4
TMEM106C-220ENST00000552561 COL13A1Q5TAT6 717 aaPredicted RBP6.3□□□□□ -1.4
TMEM106C-220ENST00000552561 IP6K1Q92551 441 aa6.3□□□□□ -1.4
TMEM106C-220ENST00000552561 CARD11Q9BXL7 1154 aa6.3□□□□□ -1.4
TMEM106C-220ENST00000552561 TERF2IPQ9NYB0 399 aa6.3□□□□□ -1.4
TMEM106C-220ENST00000552561 TIMELESSQ9UNS1 1208 aa6.3□□□□□ -1.4
TMEM106C-220ENST00000552561 NCAPD2Q15021 1401 aa6.3□□□□□ -1.4
TMEM106C-220ENST00000552561 ANKRD36BQ8N2N9 1353 aa6.3□□□□□ -1.4
TMEM106C-220ENST00000552561 IL2RBP14784 551 aa6.29□□□□□ -1.4
TMEM106C-220ENST00000552561 POLD1P28340 1107 aa6.29□□□□□ -1.4
TMEM106C-220ENST00000552561 PTGER2P43116 358 aa6.29□□□□□ -1.4
TMEM106C-220ENST00000552561 PTF1AQ7RTS3 328 aa6.29□□□□□ -1.4
TMEM106C-220ENST00000552561 HDGFL2Q7Z4V5 671 aaPredicted RBP6.29□□□□□ -1.4
TMEM106C-220ENST00000552561 SLC12A5Q9H2X9 1139 aa6.29□□□□□ -1.4
TMEM106C-220ENST00000552561 GOLGB1Q14789 3259 aaKnown RBP6.29□□□□□ -1.4
TMEM106C-220ENST00000552561 NSD2O96028 1365 aa6.29□□□□□ -1.4
TMEM106C-220ENST00000552561 CGNL1Q0VF96 1302 aa6.28□□□□□ -1.4
TMEM106C-220ENST00000552561 SLC15A2Q16348 729 aa6.28□□□□□ -1.4
TMEM106C-220ENST00000552561 NME9Q86XW9 330 aa6.28□□□□□ -1.4
TMEM106C-220ENST00000552561 TONSLQ96HA7 1378 aa6.28□□□□□ -1.4
TMEM106C-220ENST00000552561 LY75O60449 1722 aa6.28□□□□□ -1.4
TMEM106C-220ENST00000552561 CLSPNQ9HAW4 1339 aa6.27□□□□□ -1.41
TMEM106C-220ENST00000552561 BTAF1O14981 1849 aa6.27□□□□□ -1.41
TMEM106C-220ENST00000552561 GALR2O43603 387 aaPredicted RBP6.27□□□□□ -1.41
TMEM106C-220ENST00000552561 SLC27A3Q5K4L6 730 aa6.27□□□□□ -1.41
TMEM106C-220ENST00000552561 ZNF526Q8TF50 670 aaPredicted RBP6.27□□□□□ -1.41
TMEM106C-220ENST00000552561 SLC16A10Q8TF71 515 aa6.27□□□□□ -1.41
TMEM106C-220ENST00000552561 ANKRD26Q9UPS8 1709 aa6.27□□□□□ -1.41
TMEM106C-220ENST00000552561 KAT6BQ8WYB5 2073 aa6.27□□□□□ -1.41
TMEM106C-220ENST00000552561 MAP3K19Q56UN5 1328 aa6.26□□□□□ -1.41
TMEM106C-220ENST00000552561 ST20-MTHFSA0A0A6YYL1 179 aa6.26□□□□□ -1.41
TMEM106C-220ENST00000552561 CSB-PGBD3P0DP91 1061 aa6.26□□□□□ -1.41
TMEM106C-220ENST00000552561 HMGB2P26583 209 aaKnown RBP6.26□□□□□ -1.41
TMEM106C-220ENST00000552561 HOXC9P31274 260 aa6.26□□□□□ -1.41
TMEM106C-220ENST00000552561 NEUROD1Q13562 356 aa6.26□□□□□ -1.41
TMEM106C-220ENST00000552561 C16orf71Q8IYS4 520 aaPredicted RBP6.26□□□□□ -1.41
TMEM106C-220ENST00000552561 ANKRD24Q8TF21 1146 aa6.26□□□□□ -1.41
TMEM106C-220ENST00000552561 FYB1O15117 783 aa6.25□□□□□ -1.41
TMEM106C-220ENST00000552561 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.25□□□□□ -1.41
TMEM106C-220ENST00000552561 KLRG1Q96E93 195 aa6.25□□□□□ -1.41
TMEM106C-220ENST00000552561 INSRP06213 1382 aa6.25□□□□□ -1.41
TMEM106C-220ENST00000552561 MEGF6O75095 1541 aa6.25□□□□□ -1.41
TMEM106C-220ENST00000552561 USP47Q96K76 1375 aa6.24□□□□□ -1.41
TMEM106C-220ENST00000552561 CDCA8Q53HL2 280 aa6.24□□□□□ -1.41
TMEM106C-220ENST00000552561 COG3Q96JB2 828 aa6.24□□□□□ -1.41
TMEM106C-220ENST00000552561 PDGFDQ9GZP0 370 aaPredicted RBP6.24□□□□□ -1.41
TMEM106C-220ENST00000552561 LRRC4BQ9NT99 713 aa6.24□□□□□ -1.41
TMEM106C-220ENST00000552561 NLRP2Q9NX02 1062 aa6.24□□□□□ -1.41
TMEM106C-220ENST00000552561 PKD1L3Q7Z443 1732 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms