RNA–Protein interactions for RNA: ENST00000552555.1

DDX23-215, Transcript of DEAD-box helicase 23, humanhuman

TSL 4

Gene DDX23, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-215ENST00000552555 DCTN1Q14203 1278 aa13.22□□□□□ -0.29
DDX23-215ENST00000552555 ATF7IPQ6VMQ6 1270 aa13.22□□□□□ -0.29
DDX23-215ENST00000552555 PANK1Q8TE04 598 aa13.22□□□□□ -0.29
DDX23-215ENST00000552555 CANXP27824 592 aaKnown RBP13.21□□□□□ -0.29
DDX23-215ENST00000552555 MVPQ14764 893 aaKnown RBP13.21□□□□□ -0.29
DDX23-215ENST00000552555 DZIP1LQ8IYY4 767 aaKnown RBP13.21□□□□□ -0.29
DDX23-215ENST00000552555 MRPL50Q8N5N7 158 aaKnown RBP13.21□□□□□ -0.29
DDX23-215ENST00000552555 FRAT1Q92837 279 aaPredicted RBP13.21□□□□□ -0.29
DDX23-215ENST00000552555 CLUAP1Q96AJ1 413 aa13.21□□□□□ -0.29
DDX23-215ENST00000552555 SLAIN2Q9P270 581 aa13.21□□□□□ -0.29
DDX23-215ENST00000552555 CEMIPQ8WUJ3 1361 aa13.2□□□□□ -0.3
DDX23-215ENST00000552555 MAP3K5Q99683 1374 aa13.2□□□□□ -0.3
DDX23-215ENST00000552555 SOS1Q07889 1333 aaPredicted RBP13.2□□□□□ -0.3
DDX23-215ENST00000552555 CRYBG1Q9Y4K1 1723 aa13.2□□□□□ -0.3
DDX23-215ENST00000552555 GNAT3A8MTJ3 354 aa13.2□□□□□ -0.3
DDX23-215ENST00000552555 TRIM27P14373 513 aa13.2□□□□□ -0.3
DDX23-215ENST00000552555 TWISTNBQ3B726 338 aaPredicted RBP13.2□□□□□ -0.3
DDX23-215ENST00000552555 MCM10Q7L590 875 aa13.2□□□□□ -0.3
DDX23-215ENST00000552555 TSPYL6Q8N831 410 aa13.2□□□□□ -0.3
DDX23-215ENST00000552555 C8orf58Q8NAV2 365 aa13.2□□□□□ -0.3
DDX23-215ENST00000552555 RTF1Q92541 710 aaKnown RBP13.2□□□□□ -0.3
DDX23-215ENST00000552555 BCL2L13Q9BXK5 485 aa13.2□□□□□ -0.3
DDX23-215ENST00000552555 COG6Q9Y2V7 657 aa13.2□□□□□ -0.3
DDX23-215ENST00000552555 AMOTQ4VCS5 1084 aa13.19□□□□□ -0.3
DDX23-215ENST00000552555 ANKRD24Q8TF21 1146 aa13.19□□□□□ -0.3
DDX23-215ENST00000552555 NOB1Q9ULX3 412 aaKnown RBP13.19□□□□□ -0.3
DDX23-215ENST00000552555 AXIN2Q9Y2T1 843 aa13.19□□□□□ -0.3
DDX23-215ENST00000552555 LAS1LQ9Y4W2 734 aaKnown RBP13.19□□□□□ -0.3
DDX23-215ENST00000552555 OVOS2A0A0G2JMS6 1433 aa13.19□□□□□ -0.3
DDX23-215ENST00000552555 ERBB3P21860 1342 aa13.18□□□□□ -0.3
DDX23-215ENST00000552555 COL18A1P39060 1754 aa13.18□□□□□ -0.3
DDX23-215ENST00000552555 TCERG1O14776 1098 aaKnown RBP13.18□□□□□ -0.3
DDX23-215ENST00000552555 ILDR1Q86SU0 546 aaPredicted RBP13.18□□□□□ -0.3
DDX23-215ENST00000552555 IL17REQ8NFR9 667 aa13.18□□□□□ -0.3
DDX23-215ENST00000552555 LTV1Q96GA3 475 aaPredicted RBP13.18□□□□□ -0.3
DDX23-215ENST00000552555 TNNQ9UQP3 1299 aa13.18□□□□□ -0.3
DDX23-215ENST00000552555 DDX17Q92841 729 aaKnown RBP13.17□□□□□ -0.3
DDX23-215ENST00000552555 PLEKHO1Q53GL0 409 aaPredicted RBP13.16□□□□□ -0.3
DDX23-215ENST00000552555 LMOD2Q6P5Q4 547 aa13.16□□□□□ -0.3
DDX23-215ENST00000552555 DDX19BQ9UMR2 479 aa13.16□□□□□ -0.3
DDX23-215ENST00000552555 ABCC4O15439 1325 aa13.15□□□□□ -0.3
DDX23-215ENST00000552555 TAF7Q15545 349 aaPredicted RBP13.15□□□□□ -0.3
DDX23-215ENST00000552555 AKAP4Q5JQC9 854 aa13.15□□□□□ -0.3
DDX23-215ENST00000552555 FTSJ3Q8IY81 847 aaKnown RBP13.15□□□□□ -0.3
DDX23-215ENST00000552555 USHBP1Q8N6Y0 703 aa13.15□□□□□ -0.3
DDX23-215ENST00000552555 LRRC59Q96AG4 307 aaKnown RBP13.15□□□□□ -0.3
DDX23-215ENST00000552555 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.15□□□□□ -0.3
DDX23-215ENST00000552555 NHSL1Q5SYE7 1610 aa13.14□□□□□ -0.31
DDX23-215ENST00000552555 API5Q9BZZ5 524 aaKnown RBP13.14□□□□□ -0.31
DDX23-215ENST00000552555 TSPYL4Q9UJ04 414 aa13.14□□□□□ -0.31
DDX23-215ENST00000552555 ADAMTS7Q9UKP4 1686 aa13.13□□□□□ -0.31
DDX23-215ENST00000552555 IGHDP01880 384 aa13.13□□□□□ -0.31
DDX23-215ENST00000552555 ZC3H6P61129 1189 aaKnown RBP13.13□□□□□ -0.31
DDX23-215ENST00000552555 TMEM57Q8N5G2 664 aa13.13□□□□□ -0.31
DDX23-215ENST00000552555 CHMP4BQ9H444 224 aaKnown RBP13.13□□□□□ -0.31
DDX23-215ENST00000552555 ZBTB40Q9NUA8 1239 aa13.13□□□□□ -0.31
DDX23-215ENST00000552555 RBM19Q9Y4C8 960 aaKnown RBP13.13□□□□□ -0.31
DDX23-215ENST00000552555 PCDHB15Q9Y5E8 787 aa13.13□□□□□ -0.31
DDX23-215ENST00000552555 FAM208AQ9UK61 1670 aaKnown RBP13.12□□□□□ -0.31
DDX23-215ENST00000552555 PTPRCP08575 1304 aa13.12□□□□□ -0.31
DDX23-215ENST00000552555 LTBP4Q8N2S1 1624 aa13.11□□□□□ -0.31
DDX23-215ENST00000552555 HOXB7P09629 217 aa13.11□□□□□ -0.31
DDX23-215ENST00000552555 HDAC1Q13547 482 aaPredicted RBP13.11□□□□□ -0.31
DDX23-215ENST00000552555 RGS12O14924 1447 aa13.11□□□□□ -0.31
DDX23-215ENST00000552555 ELL2O00472 640 aaPredicted RBP13.1□□□□□ -0.31
DDX23-215ENST00000552555 ZBTB7BO15156 539 aaPredicted RBP13.1□□□□□ -0.31
DDX23-215ENST00000552555 KRT24Q2M2I5 525 aa13.1□□□□□ -0.31
DDX23-215ENST00000552555 INTS3Q68E01 1043 aaKnown RBP13.1□□□□□ -0.31
DDX23-215ENST00000552555 ZNF530Q6P9A1 599 aaPredicted RBP13.1□□□□□ -0.31
DDX23-215ENST00000552555 CERKQ8TCT0 537 aa13.1□□□□□ -0.31
DDX23-215ENST00000552555 RWDD1Q9H446 243 aaPredicted RBP13.1□□□□□ -0.31
DDX23-215ENST00000552555 RGPD2P0DJD1 1756 aa13.09□□□□□ -0.31
DDX23-215ENST00000552555 ZBTB7CA1YPR0 619 aa13.09□□□□□ -0.31
DDX23-215ENST00000552555 CABLES1Q8TDN4 633 aa13.09□□□□□ -0.31
DDX23-215ENST00000552555 FBXO41Q8TF61 875 aa13.09□□□□□ -0.31
DDX23-215ENST00000552555 RNMTO43148 476 aaKnown RBP13.08□□□□□ -0.32
DDX23-215ENST00000552555 ITPRIPQ8IWB1 547 aa13.08□□□□□ -0.32
DDX23-215ENST00000552555 CHMP4AQ9BY43 222 aa13.08□□□□□ -0.32
DDX23-215ENST00000552555 LGR6Q9HBX8 967 aa13.08□□□□□ -0.32
DDX23-215ENST00000552555 MIS18AQ9NYP9 233 aa13.08□□□□□ -0.32
DDX23-215ENST00000552555 AHDC1Q5TGY3 1603 aaPredicted RBP13.08□□□□□ -0.32
DDX23-215ENST00000552555 HEG1Q9ULI3 1381 aa13.07□□□□□ -0.32
DDX23-215ENST00000552555 C1orf141Q5JVX7 400 aa13.07□□□□□ -0.32
DDX23-215ENST00000552555 ABCA3Q99758 1704 aa13.06□□□□□ -0.32
DDX23-215ENST00000552555 TATP17735 454 aaPredicted RBP13.06□□□□□ -0.32
DDX23-215ENST00000552555 EIF4A1P60842 406 aaKnown RBP13.06□□□□□ -0.32
DDX23-215ENST00000552555 CCDC30Q5VVM6 783 aa13.06□□□□□ -0.32
DDX23-215ENST00000552555 SMC5Q8IY18 1101 aa13.06□□□□□ -0.32
DDX23-215ENST00000552555 RAPGEF4Q8WZA2 1011 aa13.06□□□□□ -0.32
DDX23-215ENST00000552555 NLRP2Q9NX02 1062 aa13.06□□□□□ -0.32
DDX23-215ENST00000552555 SPG7Q9UQ90 795 aa13.06□□□□□ -0.32
DDX23-215ENST00000552555 MEGF6O75095 1541 aa13.06□□□□□ -0.32
DDX23-215ENST00000552555 WDR17Q8IZU2 1322 aa13.06□□□□□ -0.32
DDX23-215ENST00000552555 COL5A2P05997 1499 aaPredicted RBP13.05□□□□□ -0.32
DDX23-215ENST00000552555 KDM3BQ7LBC6 1761 aa13.05□□□□□ -0.32
DDX23-215ENST00000552555 RGPD5Q99666 1765 aa13.05□□□□□ -0.32
DDX23-215ENST00000552555 CHRNA2Q15822 529 aa13.05□□□□□ -0.32
DDX23-215ENST00000552555 MRC1P22897 1456 aa13.04□□□□□ -0.32
DDX23-215ENST00000552555 SLC4A2P04920 1241 aa13.04□□□□□ -0.32
DDX23-215ENST00000552555 PHKG2P15735 406 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms