RNA–Protein interactions for RNA: ENST00000552548.5

PFDN5-217, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 497 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-217ENST00000552548 SEPT12Q8IYM1 358 aa9.43□□□□□ -0.9
PFDN5-217ENST00000552548 MARCH10Q8NA82 808 aaPredicted RBP9.43□□□□□ -0.9
PFDN5-217ENST00000552548 DDX54Q8TDD1 881 aaKnown RBP9.43□□□□□ -0.9
PFDN5-217ENST00000552548 TRIM35Q9UPQ4 493 aa9.43□□□□□ -0.9
PFDN5-217ENST00000552548 IL2RBP14784 551 aa9.42□□□□□ -0.9
PFDN5-217ENST00000552548 TMPOP42166 694 aaKnown RBP9.42□□□□□ -0.9
PFDN5-217ENST00000552548 MPRIPQ6WCQ1 1025 aa9.42□□□□□ -0.9
PFDN5-217ENST00000552548 IL17REQ8NFR9 667 aa9.42□□□□□ -0.9
PFDN5-217ENST00000552548 CDCA7LQ96GN5 454 aa9.42□□□□□ -0.9
PFDN5-217ENST00000552548 MIS18AQ9NYP9 233 aa9.42□□□□□ -0.9
PFDN5-217ENST00000552548 TRPC5Q9UL62 973 aaPredicted RBP9.42□□□□□ -0.9
PFDN5-217ENST00000552548 NUDCQ9Y266 331 aa9.42□□□□□ -0.9
PFDN5-217ENST00000552548 SHANK3Q9BYB0 1731 aa9.42□□□□□ -0.9
PFDN5-217ENST00000552548 NWD2Q9ULI1 1742 aa9.42□□□□□ -0.9
PFDN5-217ENST00000552548 ABCC6O95255 1503 aa9.41□□□□□ -0.9
PFDN5-217ENST00000552548 OVOS2A0A0G2JMS6 1433 aa9.41□□□□□ -0.9
PFDN5-217ENST00000552548 RGS12O14924 1447 aa9.41□□□□□ -0.9
PFDN5-217ENST00000552548 A0A0G2JS52 829 aa9.41□□□□□ -0.9
PFDN5-217ENST00000552548 KCNQ3O43525 872 aa9.41□□□□□ -0.9
PFDN5-217ENST00000552548 KCNQ2O43526 872 aa9.41□□□□□ -0.9
PFDN5-217ENST00000552548 FCHSD2O94868 740 aa9.41□□□□□ -0.9
PFDN5-217ENST00000552548 MYT1Q01538 1121 aa9.41□□□□□ -0.9
PFDN5-217ENST00000552548 ZNF530Q6P9A1 599 aaPredicted RBP9.41□□□□□ -0.9
PFDN5-217ENST00000552548 RUNDC1Q96C34 613 aa9.41□□□□□ -0.9
PFDN5-217ENST00000552548 ACSBG1Q96GR2 724 aa9.41□□□□□ -0.9
PFDN5-217ENST00000552548 PHF23Q9BUL5 403 aaPredicted RBP9.41□□□□□ -0.9
PFDN5-217ENST00000552548 KDM6AO15550 1401 aaPredicted RBP9.4□□□□□ -0.9
PFDN5-217ENST00000552548 TATP17735 454 aaPredicted RBP9.4□□□□□ -0.9
PFDN5-217ENST00000552548 RIPK4P57078 832 aa9.4□□□□□ -0.9
PFDN5-217ENST00000552548 HNRNPUQ00839 825 aaKnown RBP eCLIP9.4□□□□□ -0.9
PFDN5-217ENST00000552548 ILDR2Q71H61 639 aa9.4□□□□□ -0.9
PFDN5-217ENST00000552548 RAPGEF4Q8WZA2 1011 aa9.4□□□□□ -0.9
PFDN5-217ENST00000552548 LRRC37A3O60309 1634 aa9.39□□□□□ -0.91
PFDN5-217ENST00000552548 PHKG2P15735 406 aa9.39□□□□□ -0.91
PFDN5-217ENST00000552548 NFE2L2Q16236 605 aa9.39□□□□□ -0.91
PFDN5-217ENST00000552548 KRT24Q2M2I5 525 aa9.39□□□□□ -0.91
PFDN5-217ENST00000552548 BARGINQ6ZT62 677 aa9.39□□□□□ -0.91
PFDN5-217ENST00000552548 ZCRB1Q8TBF4 217 aaKnown RBP9.39□□□□□ -0.91
PFDN5-217ENST00000552548 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.39□□□□□ -0.91
PFDN5-217ENST00000552548 THSD7AQ9UPZ6 1657 aa9.39□□□□□ -0.91
PFDN5-217ENST00000552548 ONECUT3O60422 494 aaPredicted RBP9.38□□□□□ -0.91
PFDN5-217ENST00000552548 KCNQ4P56696 695 aa9.38□□□□□ -0.91
PFDN5-217ENST00000552548 WNK3Q9BYP7 1800 aa9.38□□□□□ -0.91
PFDN5-217ENST00000552548 RXRBP28702 533 aa9.37□□□□□ -0.91
PFDN5-217ENST00000552548 RBM6P78332 1123 aaKnown RBP9.37□□□□□ -0.91
PFDN5-217ENST00000552548 SLC39A6Q13433 755 aa9.37□□□□□ -0.91
PFDN5-217ENST00000552548 DDB1Q16531 1140 aa9.37□□□□□ -0.91
PFDN5-217ENST00000552548 ZNF772Q68DY9 489 aaPredicted RBP9.37□□□□□ -0.91
PFDN5-217ENST00000552548 TSR2Q969E8 191 aaKnown RBP9.37□□□□□ -0.91
PFDN5-217ENST00000552548 BRWD3Q6RI45 1802 aa9.37□□□□□ -0.91
PFDN5-217ENST00000552548 TOGARAM1Q9Y4F4 1720 aa9.36□□□□□ -0.91
PFDN5-217ENST00000552548 ZNF521Q96K83 1311 aa9.36□□□□□ -0.91
PFDN5-217ENST00000552548 PRAMEF22A3QJZ6 481 aa9.36□□□□□ -0.91
PFDN5-217ENST00000552548 EXOC5O00471 708 aa9.36□□□□□ -0.91
PFDN5-217ENST00000552548 RNMTO43148 476 aaKnown RBP9.36□□□□□ -0.91
PFDN5-217ENST00000552548 PLEKHO1Q53GL0 409 aaPredicted RBP9.36□□□□□ -0.91
PFDN5-217ENST00000552548 WWC1Q8IX03 1113 aa9.36□□□□□ -0.91
PFDN5-217ENST00000552548 MAPK8IP3Q9UPT6 1336 aa9.35□□□□□ -0.91
PFDN5-217ENST00000552548 PRIM1P49642 420 aaKnown RBP9.35□□□□□ -0.91
PFDN5-217ENST00000552548 TNS2Q63HR2 1409 aa9.35□□□□□ -0.91
PFDN5-217ENST00000552548 SMIM5Q71RC9 77 aa9.35□□□□□ -0.91
PFDN5-217ENST00000552548 PKD1L3Q7Z443 1732 aa9.35□□□□□ -0.91
PFDN5-217ENST00000552548 LAS1LQ9Y4W2 734 aaKnown RBP9.35□□□□□ -0.91
PFDN5-217ENST00000552548 MAP3K5Q99683 1374 aa9.35□□□□□ -0.91
PFDN5-217ENST00000552548 DLG5Q8TDM6 1919 aa9.35□□□□□ -0.91
PFDN5-217ENST00000552548 SPG7Q9UQ90 795 aa9.34□□□□□ -0.91
PFDN5-217ENST00000552548 THRAP3Q9Y2W1 955 aaKnown RBP9.34□□□□□ -0.91
PFDN5-217ENST00000552548 GNAT3A8MTJ3 354 aa9.33□□□□□ -0.92
PFDN5-217ENST00000552548 TCERG1O14776 1098 aaKnown RBP9.33□□□□□ -0.92
PFDN5-217ENST00000552548 AKAP4Q5JQC9 854 aa9.33□□□□□ -0.92
PFDN5-217ENST00000552548 KRT27Q7Z3Y8 459 aa9.33□□□□□ -0.92
PFDN5-217ENST00000552548 IFNL2Q8IZJ0 200 aa9.33□□□□□ -0.92
PFDN5-217ENST00000552548 TSPYL6Q8N831 410 aa9.33□□□□□ -0.92
PFDN5-217ENST00000552548 NFATC2IPQ8NCF5 419 aa9.33□□□□□ -0.92
PFDN5-217ENST00000552548 PIGBQ92521 554 aa9.33□□□□□ -0.92
PFDN5-217ENST00000552548 SYTL4Q96C24 671 aaPredicted RBP9.33□□□□□ -0.92
PFDN5-217ENST00000552548 SLC4A9Q96Q91 983 aa9.33□□□□□ -0.92
PFDN5-217ENST00000552548 ASAP1Q9ULH1 1129 aa9.33□□□□□ -0.92
PFDN5-217ENST00000552548 PARP4Q9UKK3 1724 aaKnown RBP9.33□□□□□ -0.92
PFDN5-217ENST00000552548 PCDH11XQ9BZA7 1347 aa9.32□□□□□ -0.92
PFDN5-217ENST00000552548 PCDH11YQ9BZA8 1340 aa9.32□□□□□ -0.92
PFDN5-217ENST00000552548 ELL2O00472 640 aaPredicted RBP9.32□□□□□ -0.92
PFDN5-217ENST00000552548 TRIM37O94972 964 aa9.32□□□□□ -0.92
PFDN5-217ENST00000552548 PDE3BQ13370 1112 aa9.32□□□□□ -0.92
PFDN5-217ENST00000552548 NKX1-1Q15270 411 aaPredicted RBP9.32□□□□□ -0.92
PFDN5-217ENST00000552548 AMOTQ4VCS5 1084 aa9.32□□□□□ -0.92
PFDN5-217ENST00000552548 GAS2L2Q8NHY3 880 aa9.32□□□□□ -0.92
PFDN5-217ENST00000552548 ZNF853P0CG23 659 aa9.31□□□□□ -0.92
PFDN5-217ENST00000552548 PIP4K2AP48426 406 aaPredicted RBP9.31□□□□□ -0.92
PFDN5-217ENST00000552548 C1orf141Q5JVX7 400 aa9.31□□□□□ -0.92
PFDN5-217ENST00000552548 MBIPQ9NS73 344 aa9.31□□□□□ -0.92
PFDN5-217ENST00000552548 CEMIPQ8WUJ3 1361 aa9.31□□□□□ -0.92
PFDN5-217ENST00000552548 C8orf58Q8NAV2 365 aa9.3□□□□□ -0.92
PFDN5-217ENST00000552548 NECTIN2Q92692 538 aa9.3□□□□□ -0.92
PFDN5-217ENST00000552548 SLC52A2Q9HAB3 445 aa9.3□□□□□ -0.92
PFDN5-217ENST00000552548 ATG3Q9NT62 314 aa9.3□□□□□ -0.92
PFDN5-217ENST00000552548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.3□□□□□ -0.92
PFDN5-217ENST00000552548 DOT1LQ8TEK3 1739 aa9.3□□□□□ -0.92
PFDN5-217ENST00000552548 FANCIQ9NVI1 1328 aa9.3□□□□□ -0.92
PFDN5-217ENST00000552548 ADAMTS7Q9UKP4 1686 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms