RNA–Protein interactions for RNA: ENST00000552286.5

MTA1-220, Transcript of metastasis associated 1, humanhuman

TSL 2

Gene MTA1, Length 1,943 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-220ENST00000552286 EXOSC9Q06265 439 aaKnown RBP25.27■■□□□ 1.64
MTA1-220ENST00000552286 LMO7Q8WWI1 1683 aa25.27■■□□□ 1.64
MTA1-220ENST00000552286 FAM208AQ9UK61 1670 aaKnown RBP25.27■■□□□ 1.64
MTA1-220ENST00000552286 TCERG1O14776 1098 aaKnown RBP25.26■■□□□ 1.63
MTA1-220ENST00000552286 CENPQQ7L2Z9 268 aaPredicted RBP25.25■■□□□ 1.63
MTA1-220ENST00000552286 PANK1Q8TE04 598 aa25.25■■□□□ 1.63
MTA1-220ENST00000552286 BCL2L13Q9BXK5 485 aa25.25■■□□□ 1.63
MTA1-220ENST00000552286 NCAPD2Q15021 1401 aa25.25■■□□□ 1.63
MTA1-220ENST00000552286 CSB-PGBD3P0DP91 1061 aa25.23■■□□□ 1.63
MTA1-220ENST00000552286 COG6Q9Y2V7 657 aa25.22■■□□□ 1.63
MTA1-220ENST00000552286 LMOD3Q0VAK6 560 aa25.21■■□□□ 1.63
MTA1-220ENST00000552286 MTHFSDQ2M296 383 aaKnown RBP25.21■■□□□ 1.63
MTA1-220ENST00000552286 NLRP2Q9NX02 1062 aa25.21■■□□□ 1.63
MTA1-220ENST00000552286 COL5A2P05997 1499 aaPredicted RBP25.2■■□□□ 1.63
MTA1-220ENST00000552286 CALD1Q05682 793 aaKnown RBP25.2■■□□□ 1.62
MTA1-220ENST00000552286 GAS2L2Q8NHY3 880 aa25.19■■□□□ 1.62
MTA1-220ENST00000552286 FAM83GA6ND36 823 aa25.18■■□□□ 1.62
MTA1-220ENST00000552286 MS4A1P11836 297 aa25.18■■□□□ 1.62
MTA1-220ENST00000552286 COL14A1Q05707 1796 aaKnown RBP25.18■■□□□ 1.62
MTA1-220ENST00000552286 RLBP1P12271 317 aa25.18■■□□□ 1.62
MTA1-220ENST00000552286 CLUAP1Q96AJ1 413 aa25.18■■□□□ 1.62
MTA1-220ENST00000552286 THUMPD2Q9BTF0 503 aaKnown RBP25.18■■□□□ 1.62
MTA1-220ENST00000552286 TNNQ9UQP3 1299 aa25.18■■□□□ 1.62
MTA1-220ENST00000552286 SMC4Q9NTJ3 1288 aa25.17■■□□□ 1.62
MTA1-220ENST00000552286 AAMPQ13685 434 aa25.16■■□□□ 1.62
MTA1-220ENST00000552286 ZKSCAN2Q63HK3 967 aa25.16■■□□□ 1.62
MTA1-220ENST00000552286 SSH1Q8WYL5 1049 aa25.16■■□□□ 1.62
MTA1-220ENST00000552286 WDR17Q8IZU2 1322 aa25.16■■□□□ 1.62
MTA1-220ENST00000552286 DCTN1Q14203 1278 aa25.15■■□□□ 1.62
MTA1-220ENST00000552286 IFT57Q9NWB7 429 aa25.15■■□□□ 1.62
MTA1-220ENST00000552286 GNAI1P63096 354 aa25.14■■□□□ 1.62
MTA1-220ENST00000552286 LAS1LQ9Y4W2 734 aaKnown RBP25.14■■□□□ 1.62
MTA1-220ENST00000552286 ZNF853P0CG23 659 aa25.13■■□□□ 1.61
MTA1-220ENST00000552286 SKAP1Q86WV1 359 aa25.12■■□□□ 1.61
MTA1-220ENST00000552286 STRN4Q9NRL3 753 aa25.12■■□□□ 1.61
MTA1-220ENST00000552286 TOM1L2Q6ZVM7 507 aa25.12■■□□□ 1.61
MTA1-220ENST00000552286 MCM10Q7L590 875 aa25.12■■□□□ 1.61
MTA1-220ENST00000552286 BTG4Q9NY30 223 aa25.12■■□□□ 1.61
MTA1-220ENST00000552286 NUTM2BA6NNL0 878 aaPredicted RBP25.11■■□□□ 1.61
MTA1-220ENST00000552286 NUTM2EB1AL46 878 aaPredicted RBP25.11■■□□□ 1.61
MTA1-220ENST00000552286 ADAMTS2O95450 1211 aa25.11■■□□□ 1.61
MTA1-220ENST00000552286 EVA1CP58658 441 aa25.11■■□□□ 1.61
MTA1-220ENST00000552286 ALDH1L2Q3SY69 923 aa25.11■■□□□ 1.61
MTA1-220ENST00000552286 NUTM2AQ8IVF1 878 aaPredicted RBP25.11■■□□□ 1.61
MTA1-220ENST00000552286 DZIP1LQ8IYY4 767 aaKnown RBP25.11■■□□□ 1.61
MTA1-220ENST00000552286 RAPGEF4Q8WZA2 1011 aa25.11■■□□□ 1.61
MTA1-220ENST00000552286 RTF1Q92541 710 aaKnown RBP25.11■■□□□ 1.61
MTA1-220ENST00000552286 ZNF428Q96B54 188 aa25.1■■□□□ 1.61
MTA1-220ENST00000552286 PLCH1Q4KWH8 1693 aa25.1■■□□□ 1.61
MTA1-220ENST00000552286 MAP3K5Q99683 1374 aa25.1■■□□□ 1.61
MTA1-220ENST00000552286 JCADQ9P266 1359 aa25.1■■□□□ 1.61
MTA1-220ENST00000552286 MEGF6O75095 1541 aa25.1■■□□□ 1.61
MTA1-220ENST00000552286 PLEKHO1Q53GL0 409 aaPredicted RBP25.1■■□□□ 1.61
MTA1-220ENST00000552286 GNAT3A8MTJ3 354 aa25.09■■□□□ 1.61
MTA1-220ENST00000552286 IGHDP01880 384 aa25.09■■□□□ 1.61
MTA1-220ENST00000552286 CFAP44Q96MT7 982 aa25.09■■□□□ 1.61
MTA1-220ENST00000552286 MVPQ14764 893 aaKnown RBP25.08■■□□□ 1.61
MTA1-220ENST00000552286 AMOTQ4VCS5 1084 aa25.08■■□□□ 1.61
MTA1-220ENST00000552286 LARP1Q6PKG0 1096 aaKnown RBP25.08■■□□□ 1.61
MTA1-220ENST00000552286 FTSJ3Q8IY81 847 aaKnown RBP25.08■■□□□ 1.61
MTA1-220ENST00000552286 MBIPQ9NS73 344 aa25.08■■□□□ 1.61
MTA1-220ENST00000552286 TRIM27P14373 513 aa25.08■■□□□ 1.6
MTA1-220ENST00000552286 PDE4AP27815 886 aa25.08■■□□□ 1.6
MTA1-220ENST00000552286 ATF7IPQ6VMQ6 1270 aa25.08■■□□□ 1.6
MTA1-220ENST00000552286 ZNF530Q6P9A1 599 aaPredicted RBP25.07■■□□□ 1.6
MTA1-220ENST00000552286 NOB1Q9ULX3 412 aaKnown RBP25.07■■□□□ 1.6
MTA1-220ENST00000552286 KIF16BQ96L93 1317 aa25.07■■□□□ 1.6
MTA1-220ENST00000552286 LRRC37A3O60309 1634 aa25.06■■□□□ 1.6
MTA1-220ENST00000552286 TATP17735 454 aaPredicted RBP25.06■■□□□ 1.6
MTA1-220ENST00000552286 HTATSF1O43719 755 aaKnown RBP25.06■■□□□ 1.6
MTA1-220ENST00000552286 PARP4Q9UKK3 1724 aaKnown RBP25.05■■□□□ 1.6
MTA1-220ENST00000552286 VAMP4O75379 141 aa25.05■■□□□ 1.6
MTA1-220ENST00000552286 BRPF1P55201 1214 aaPredicted RBP25.05■■□□□ 1.6
MTA1-220ENST00000552286 BACH2Q9BYV9 841 aa25.05■■□□□ 1.6
MTA1-220ENST00000552286 CRB1P82279 1406 aa25.04■■□□□ 1.6
MTA1-220ENST00000552286 CARD10Q9BWT7 1032 aa25.04■■□□□ 1.6
MTA1-220ENST00000552286 IPO8O15397 1037 aaKnown RBP25.04■■□□□ 1.6
MTA1-220ENST00000552286 PKD1L3Q7Z443 1732 aa25.04■■□□□ 1.6
MTA1-220ENST00000552286 HSPA1LP34931 641 aa25.03■■□□□ 1.6
MTA1-220ENST00000552286 PCDHB15Q9Y5E8 787 aa25.03■■□□□ 1.6
MTA1-220ENST00000552286 AKAP4Q5JQC9 854 aa25.02■■□□□ 1.6
MTA1-220ENST00000552286 C1orf141Q5JVX7 400 aa25.02■■□□□ 1.6
MTA1-220ENST00000552286 TSPYL6Q8N831 410 aa25.02■■□□□ 1.6
MTA1-220ENST00000552286 PLEKHG2Q9H7P9 1386 aa25.02■■□□□ 1.6
MTA1-220ENST00000552286 NRAPQ86VF7 1730 aa25.02■■□□□ 1.6
MTA1-220ENST00000552286 VIRMAQ69YN4 1812 aaKnown RBP25.02■■□□□ 1.6
MTA1-220ENST00000552286 MSH5O43196 834 aa25.02■■□□□ 1.6
MTA1-220ENST00000552286 OVOS2A0A0G2JMS6 1433 aa25.01■■□□□ 1.59
MTA1-220ENST00000552286 IL17REQ8NFR9 667 aa25■■□□□ 1.59
MTA1-220ENST00000552286 USP35Q9P2H5 1018 aa25■■□□□ 1.59
MTA1-220ENST00000552286 SPG7Q9UQ90 795 aa25■■□□□ 1.59
MTA1-220ENST00000552286 NWD2Q9ULI1 1742 aa24.99■■□□□ 1.59
MTA1-220ENST00000552286 TWISTNBQ3B726 338 aaPredicted RBP24.99■■□□□ 1.59
MTA1-220ENST00000552286 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.99■■□□□ 1.59
MTA1-220ENST00000552286 DDX19BQ9UMR2 479 aa24.99■■□□□ 1.59
MTA1-220ENST00000552286 SPATA31A6Q5VVP1 1343 aa24.98■■□□□ 1.59
MTA1-220ENST00000552286 MRPL50Q8N5N7 158 aaKnown RBP24.98■■□□□ 1.59
MTA1-220ENST00000552286 C8orf58Q8NAV2 365 aa24.98■■□□□ 1.59
MTA1-220ENST00000552286 CEMIPQ8WUJ3 1361 aa24.97■■□□□ 1.59
MTA1-220ENST00000552286 ELL2O00472 640 aaPredicted RBP24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms