RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 TUBGCP6Q96RT7 1819 aa22.59■■□□□ 1.21
CALCOCO1-220ENST00000552282 NCAPD2Q15021 1401 aa22.58■■□□□ 1.21
CALCOCO1-220ENST00000552282 SMG6Q86US8 1419 aaKnown RBP22.58■■□□□ 1.21
CALCOCO1-220ENST00000552282 KAT6BQ8WYB5 2073 aa22.58■■□□□ 1.21
CALCOCO1-220ENST00000552282 AKT1S1Q96B36 256 aa22.58■■□□□ 1.21
CALCOCO1-220ENST00000552282 CLSPNQ9HAW4 1339 aa22.57■■□□□ 1.2
CALCOCO1-220ENST00000552282 ZNF827Q17R98 1081 aa22.57■■□□□ 1.2
CALCOCO1-220ENST00000552282 FLT4P35916 1363 aa22.56■■□□□ 1.2
CALCOCO1-220ENST00000552282 DCAF8L1A6NGE4 600 aa22.56■■□□□ 1.2
CALCOCO1-220ENST00000552282 YY1P25490 414 aa22.56■■□□□ 1.2
CALCOCO1-220ENST00000552282 PKD1L3Q7Z443 1732 aa22.55■■□□□ 1.2
CALCOCO1-220ENST00000552282 ZCRB1Q8TBF4 217 aaKnown RBP22.55■■□□□ 1.2
CALCOCO1-220ENST00000552282 SLC16A10Q8TF71 515 aa22.55■■□□□ 1.2
CALCOCO1-220ENST00000552282 LTV1Q96GA3 475 aaPredicted RBP22.55■■□□□ 1.2
CALCOCO1-220ENST00000552282 FBLN1P23142 703 aa22.54■■□□□ 1.2
CALCOCO1-220ENST00000552282 DDX54Q8TDD1 881 aaKnown RBP22.54■■□□□ 1.2
CALCOCO1-220ENST00000552282 GGNBP2Q9H3C7 697 aa22.54■■□□□ 1.2
CALCOCO1-220ENST00000552282 ATF5Q9Y2D1 282 aaPredicted RBP22.54■■□□□ 1.2
CALCOCO1-220ENST00000552282 RRS1Q15050 365 aaKnown RBP22.53■■□□□ 1.2
CALCOCO1-220ENST00000552282 NBPF6Q5VWK0 638 aa22.53■■□□□ 1.2
CALCOCO1-220ENST00000552282 NBPF4Q96M43 638 aa22.53■■□□□ 1.2
CALCOCO1-220ENST00000552282 SYT17Q9BSW7 474 aa22.53■■□□□ 1.2
CALCOCO1-220ENST00000552282 FHDC1Q9C0D6 1143 aaPredicted RBP22.52■■□□□ 1.2
CALCOCO1-220ENST00000552282 PRIM1P49642 420 aaKnown RBP22.5■■□□□ 1.19
CALCOCO1-220ENST00000552282 PNPLA7Q6ZV29 1317 aa22.5■■□□□ 1.19
CALCOCO1-220ENST00000552282 NSD3Q9BZ95 1437 aa22.49■■□□□ 1.19
CALCOCO1-220ENST00000552282 ARXQ96QS3 562 aa22.49■■□□□ 1.19
CALCOCO1-220ENST00000552282 CHD4Q14839 1912 aa22.49■■□□□ 1.19
CALCOCO1-220ENST00000552282 CARD14Q9BXL6 1004 aa22.48■■□□□ 1.19
CALCOCO1-220ENST00000552282 PLEKHG2Q9H7P9 1386 aa22.48■■□□□ 1.19
CALCOCO1-220ENST00000552282 TOGARAM1Q9Y4F4 1720 aa22.48■■□□□ 1.19
CALCOCO1-220ENST00000552282 C5P01031 1676 aa22.47■■□□□ 1.19
CALCOCO1-220ENST00000552282 HSP90AB2PQ58FF8 381 aa22.47■■□□□ 1.19
CALCOCO1-220ENST00000552282 RAPGEF4Q8WZA2 1011 aa22.47■■□□□ 1.19
CALCOCO1-220ENST00000552282 PCDH11XQ9BZA7 1347 aa22.47■■□□□ 1.19
CALCOCO1-220ENST00000552282 PCDH11YQ9BZA8 1340 aa22.47■■□□□ 1.19
CALCOCO1-220ENST00000552282 TAF1LQ8IZX4 1826 aa22.46■■□□□ 1.19
CALCOCO1-220ENST00000552282 GOLGB1Q14789 3259 aaKnown RBP22.46■■□□□ 1.19
CALCOCO1-220ENST00000552282 TATP17735 454 aaPredicted RBP22.45■■□□□ 1.18
CALCOCO1-220ENST00000552282 HMGB2P26583 209 aaKnown RBP22.44■■□□□ 1.18
CALCOCO1-220ENST00000552282 ITGB4P16144 1822 aa22.43■■□□□ 1.18
CALCOCO1-220ENST00000552282 SYTL4Q96C24 671 aaPredicted RBP22.43■■□□□ 1.18
CALCOCO1-220ENST00000552282 USHBP1Q8N6Y0 703 aa22.42■■□□□ 1.18
CALCOCO1-220ENST00000552282 MAP2P11137 1827 aaKnown RBP22.42■■□□□ 1.18
CALCOCO1-220ENST00000552282 WASHC2AQ641Q2 1341 aa22.41■■□□□ 1.18
CALCOCO1-220ENST00000552282 CCNL1Q9UK58 526 aaPredicted RBP22.41■■□□□ 1.18
CALCOCO1-220ENST00000552282 CYP27B1O15528 508 aa22.4■■□□□ 1.18
CALCOCO1-220ENST00000552282 TFCP2L1Q9NZI6 479 aa22.4■■□□□ 1.18
CALCOCO1-220ENST00000552282 EMILIN1Q9Y6C2 1016 aa22.4■■□□□ 1.18
CALCOCO1-220ENST00000552282 NKX1-1Q15270 411 aaPredicted RBP22.39■■□□□ 1.17
CALCOCO1-220ENST00000552282 POLD1P28340 1107 aa22.38■■□□□ 1.17
CALCOCO1-220ENST00000552282 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.38■■□□□ 1.179e-7■■■■□ 20.9
CALCOCO1-220ENST00000552282 PALLDQ8WX93 1383 aa22.38■■□□□ 1.17
CALCOCO1-220ENST00000552282 C4BP0C0L5 1744 aa22.37■■□□□ 1.17
CALCOCO1-220ENST00000552282 KCNQ4P56696 695 aa22.36■■□□□ 1.17
CALCOCO1-220ENST00000552282 UBR3Q6ZT12 1888 aa22.34■■□□□ 1.17
CALCOCO1-220ENST00000552282 ZNF784Q8NCA9 323 aaPredicted RBP22.33■■□□□ 1.17
CALCOCO1-220ENST00000552282 FLAD1Q8NFF5 587 aa22.33■■□□□ 1.17
CALCOCO1-220ENST00000552282 SMARCC1Q92922 1105 aaPredicted RBP22.33■■□□□ 1.17
CALCOCO1-220ENST00000552282 ZNF831Q5JPB2 1677 aa22.33■■□□□ 1.16
CALCOCO1-220ENST00000552282 COL23A1Q86Y22 540 aaPredicted RBP22.32■■□□□ 1.16
CALCOCO1-220ENST00000552282 POLKQ9UBT6 870 aa22.32■■□□□ 1.16
CALCOCO1-220ENST00000552282 EYA1Q99502 592 aa22.31■■□□□ 1.16
CALCOCO1-220ENST00000552282 SPG7Q9UQ90 795 aa22.31■■□□□ 1.16
CALCOCO1-220ENST00000552282 MPRIPQ6WCQ1 1025 aa22.28■■□□□ 1.16
CALCOCO1-220ENST00000552282 IGSF1Q8N6C5 1336 aa22.28■■□□□ 1.16
CALCOCO1-220ENST00000552282 PIGBQ92521 554 aa22.27■■□□□ 1.16
CALCOCO1-220ENST00000552282 EIF4G2P78344 907 aaKnown RBP eCLIP22.25■■□□□ 1.15
CALCOCO1-220ENST00000552282 EIF4A2Q14240 407 aaKnown RBP22.25■■□□□ 1.15
CALCOCO1-220ENST00000552282 NLGN2Q8NFZ4 835 aa22.25■■□□□ 1.15
CALCOCO1-220ENST00000552282 PHKG2P15735 406 aa22.24■■□□□ 1.15
CALCOCO1-220ENST00000552282 GPR162Q16538 588 aa22.24■■□□□ 1.15
CALCOCO1-220ENST00000552282 IFNL2Q8IZJ0 200 aa22.24■■□□□ 1.15
CALCOCO1-220ENST00000552282 PPM1GO15355 546 aaPredicted RBP22.23■■□□□ 1.15
CALCOCO1-220ENST00000552282 CD2APQ9Y5K6 639 aa22.23■■□□□ 1.15
CALCOCO1-220ENST00000552282 KDRP35968 1356 aa22.23■■□□□ 1.15
CALCOCO1-220ENST00000552282 SSFA2P28290 1259 aa22.22■■□□□ 1.15
CALCOCO1-220ENST00000552282 CICQ96RK0 1608 aaPredicted RBP22.21■■□□□ 1.15
CALCOCO1-220ENST00000552282 LOC102724428A0A0B4J2F2 783 aa22.21■■□□□ 1.15
CALCOCO1-220ENST00000552282 SIK1P57059 783 aa22.21■■□□□ 1.15
CALCOCO1-220ENST00000552282 COL5A3P25940 1745 aaPredicted RBP22.2■■□□□ 1.14
CALCOCO1-220ENST00000552282 HSPA5P11021 654 aaKnown RBP22.2■■□□□ 1.14
CALCOCO1-220ENST00000552282 AK7Q96M32 723 aa22.2■■□□□ 1.14
CALCOCO1-220ENST00000552282 TMOD3Q9NYL9 352 aa22.2■■□□□ 1.14
CALCOCO1-220ENST00000552282 GRIN3BO60391 1043 aa22.19■■□□□ 1.14
CALCOCO1-220ENST00000552282 AMIGO3Q86WK7 504 aa22.19■■□□□ 1.14
CALCOCO1-220ENST00000552282 MSH5O43196 834 aa22.18■■□□□ 1.14
CALCOCO1-220ENST00000552282 YBX3P16989 372 aaKnown RBP eCLIP22.17■■□□□ 1.14
CALCOCO1-220ENST00000552282 KLHL34Q8N239 644 aa22.17■■□□□ 1.14
CALCOCO1-220ENST00000552282 LINC00116Q8NCU8 138 aa22.17■■□□□ 1.14
CALCOCO1-220ENST00000552282 PANK3Q9H999 370 aa22.17■■□□□ 1.14
CALCOCO1-220ENST00000552282 KIF13BQ9NQT8 1826 aa22.17■■□□□ 1.14
CALCOCO1-220ENST00000552282 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.16■■□□□ 1.14
CALCOCO1-220ENST00000552282 ERVV-2B6SEH9 535 aa22.16■■□□□ 1.14
CALCOCO1-220ENST00000552282 MSL1Q68DK7 614 aa22.16■■□□□ 1.14
CALCOCO1-220ENST00000552282 PCGF6Q9BYE7 350 aa22.16■■□□□ 1.14
CALCOCO1-220ENST00000552282 KDM6AO15550 1401 aaPredicted RBP22.15■■□□□ 1.14
CALCOCO1-220ENST00000552282 HSP90AB1P08238 724 aaKnown RBP22.15■■□□□ 1.14
CALCOCO1-220ENST00000552282 ATG3Q9NT62 314 aa22.15■■□□□ 1.14
CALCOCO1-220ENST00000552282 ASAP1Q9ULH1 1129 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms