RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 ADD1P35611 737 aaKnown RBP9.3□□□□□ -0.92
USP44-207ENST00000552237 GMCL1Q96IK5 515 aa9.3□□□□□ -0.92
USP44-207ENST00000552237 GPR25O00155 361 aa9.29□□□□□ -0.92
USP44-207ENST00000552237 TRIM22Q8IYM9 498 aa9.29□□□□□ -0.92
USP44-207ENST00000552237 ZNF837Q96EG3 531 aaPredicted RBP9.29□□□□□ -0.92
USP44-207ENST00000552237 IGF1RP08069 1367 aa9.28□□□□□ -0.92
USP44-207ENST00000552237 BEND7Q8N7W2 519 aaPredicted RBP9.28□□□□□ -0.92
USP44-207ENST00000552237 TRERF1Q96PN7 1200 aa9.28□□□□□ -0.92
USP44-207ENST00000552237 ATP5J2-PTCD1G3V325 749 aa9.27□□□□□ -0.93
USP44-207ENST00000552237 H7C1W4 665 aa9.27□□□□□ -0.93
USP44-207ENST00000552237 MEN1O00255 615 aa9.27□□□□□ -0.93
USP44-207ENST00000552237 RNF144AP50876 292 aaPredicted RBP9.27□□□□□ -0.93
USP44-207ENST00000552237 PLA2G4EQ3MJ16 856 aa9.27□□□□□ -0.93
USP44-207ENST00000552237 SH3D19Q5HYK7 790 aa9.27□□□□□ -0.93
USP44-207ENST00000552237 PPP2R2DQ66LE6 453 aa9.27□□□□□ -0.93
USP44-207ENST00000552237 SEPT12Q8IYM1 358 aa9.27□□□□□ -0.93
USP44-207ENST00000552237 KDF1Q8NAX2 398 aaPredicted RBP9.27□□□□□ -0.93
USP44-207ENST00000552237 GALNT6Q8NCL4 622 aa9.27□□□□□ -0.93
USP44-207ENST00000552237 PROCA1Q8NCQ7 364 aaPredicted RBP9.27□□□□□ -0.93
USP44-207ENST00000552237 EPS8L1Q8TE68 723 aa9.27□□□□□ -0.93
USP44-207ENST00000552237 CNTNAP5Q8WYK1 1306 aa9.27□□□□□ -0.93
USP44-207ENST00000552237 BCRP11274 1271 aa9.26□□□□□ -0.93
USP44-207ENST00000552237 DCAF5Q96JK2 942 aa9.26□□□□□ -0.93
USP44-207ENST00000552237 GAS2L1Q99501 681 aaPredicted RBP9.26□□□□□ -0.93
USP44-207ENST00000552237 ESPNB1AK53 854 aa9.25□□□□□ -0.93
USP44-207ENST00000552237 SLC27A3Q5K4L6 730 aa9.25□□□□□ -0.93
USP44-207ENST00000552237 NSFL1CQ9UNZ2 370 aaKnown RBP9.25□□□□□ -0.93
USP44-207ENST00000552237 USP17L8P0C7I0 530 aa9.24□□□□□ -0.93
USP44-207ENST00000552237 FBXO31Q5XUX0 539 aaPredicted RBP9.24□□□□□ -0.93
USP44-207ENST00000552237 GTPBP3Q969Y2 492 aaKnown RBP9.24□□□□□ -0.93
USP44-207ENST00000552237 SPOCK3Q9BQ16 436 aa9.24□□□□□ -0.93
USP44-207ENST00000552237 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.24□□□□□ -0.93
USP44-207ENST00000552237 HMX1Q9NP08 348 aaPredicted RBP9.24□□□□□ -0.93
USP44-207ENST00000552237 GPC1P35052 558 aa9.23□□□□□ -0.93
USP44-207ENST00000552237 DDRGK1Q96HY6 314 aa9.23□□□□□ -0.93
USP44-207ENST00000552237 NLRP3Q96P20 1036 aa9.23□□□□□ -0.93
USP44-207ENST00000552237 ADAM23O75077 832 aa9.22□□□□□ -0.93
USP44-207ENST00000552237 MX2P20592 715 aa9.22□□□□□ -0.93
USP44-207ENST00000552237 DBN1Q16643 649 aa9.22□□□□□ -0.93
USP44-207ENST00000552237 DYRK1BQ9Y463 629 aa9.22□□□□□ -0.93
USP44-207ENST00000552237 PCDHB9Q9Y5E1 797 aa9.21□□□□□ -0.94
USP44-207ENST00000552237 A0A1W2PRU2 124 aa9.2□□□□□ -0.94
USP44-207ENST00000552237 ACDQ96AP0 544 aa9.2□□□□□ -0.94
USP44-207ENST00000552237 POU4F2Q12837 409 aa9.19□□□□□ -0.94
USP44-207ENST00000552237 ESF1Q9H501 851 aaKnown RBP9.19□□□□□ -0.94
USP44-207ENST00000552237 XP32Q5T750 250 aa9.18□□□□□ -0.94
USP44-207ENST00000552237 KDM4CQ9H3R0 1056 aa9.18□□□□□ -0.94
USP44-207ENST00000552237 GIGYF1O75420 1035 aaPredicted RBP9.17□□□□□ -0.94
USP44-207ENST00000552237 CC2D2BQ6DHV5 1058 aa9.17□□□□□ -0.94
USP44-207ENST00000552237 CYP2U1Q7Z449 544 aa9.17□□□□□ -0.94
USP44-207ENST00000552237 NUCKS1Q9H1E3 243 aaKnown RBP9.17□□□□□ -0.94
USP44-207ENST00000552237 LRRC4BQ9NT99 713 aa9.17□□□□□ -0.94
USP44-207ENST00000552237 ZBBXA8MT70 800 aa9.16□□□□□ -0.94
USP44-207ENST00000552237 RNF20Q5VTR2 975 aa9.16□□□□□ -0.94
USP44-207ENST00000552237 NBPF10Q6P3W6 841 aaKnown RBP9.16□□□□□ -0.94
USP44-207ENST00000552237 CCDC125Q86Z20 511 aa9.16□□□□□ -0.94
USP44-207ENST00000552237 NBPF15Q8N660 670 aa9.16□□□□□ -0.94
USP44-207ENST00000552237 FAM117AQ9C073 453 aa9.16□□□□□ -0.94
USP44-207ENST00000552237 GPBP1L1Q9HC44 474 aaPredicted RBP9.16□□□□□ -0.94
USP44-207ENST00000552237 TIMMDC1Q9NPL8 285 aa9.16□□□□□ -0.94
USP44-207ENST00000552237 PROCP04070 461 aa9.15□□□□□ -0.94
USP44-207ENST00000552237 RFC5P40937 340 aa9.15□□□□□ -0.94
USP44-207ENST00000552237 OIP5O43482 229 aa9.14□□□□□ -0.95
USP44-207ENST00000552237 ITGB2P05107 769 aa9.14□□□□□ -0.95
USP44-207ENST00000552237 MAP2K3P46734 347 aa9.14□□□□□ -0.95
USP44-207ENST00000552237 ERVK-9P63128 1117 aa9.14□□□□□ -0.95
USP44-207ENST00000552237 TAS1R3Q7RTX0 852 aa9.14□□□□□ -0.95
USP44-207ENST00000552237 OXCT2Q9BYC2 517 aaPredicted RBP9.14□□□□□ -0.95
USP44-207ENST00000552237 K7ELQ4 463 aaPredicted RBP9.13□□□□□ -0.95
USP44-207ENST00000552237 WASLO00401 505 aaPredicted RBP9.13□□□□□ -0.95
USP44-207ENST00000552237 F11P03951 625 aa9.13□□□□□ -0.95
USP44-207ENST00000552237 CLN3Q13286 438 aa9.13□□□□□ -0.95
USP44-207ENST00000552237 RRAGCQ9HB90 399 aa9.13□□□□□ -0.95
USP44-207ENST00000552237 MKL2Q9ULH7 1088 aa9.13□□□□□ -0.95
USP44-207ENST00000552237 GRIP2Q9C0E4 1043 aa9.12□□□□□ -0.95
USP44-207ENST00000552237 ARHGEF10LQ9HCE6 1279 aa9.12□□□□□ -0.95
USP44-207ENST00000552237 PHF24Q9UPV7 400 aa9.12□□□□□ -0.95
USP44-207ENST00000552237 SPATA31C2B4DYI2 1134 aa9.11□□□□□ -0.95
USP44-207ENST00000552237 WDR44Q5JSH3 913 aa9.11□□□□□ -0.95
USP44-207ENST00000552237 GPAMQ9HCL2 828 aa9.11□□□□□ -0.95
USP44-207ENST00000552237 FBXO45P0C2W1 286 aa9.1□□□□□ -0.95
USP44-207ENST00000552237 ZNF592Q92610 1267 aa9.1□□□□□ -0.95
USP44-207ENST00000552237 TRIM34Q9BYJ4 488 aa9.1□□□□□ -0.95
USP44-207ENST00000552237 PCDHB11Q9Y5F2 797 aa9.1□□□□□ -0.95
USP44-207ENST00000552237 GTF2E1P29083 439 aaPredicted RBP9.09□□□□□ -0.95
USP44-207ENST00000552237 SNRPNP63162 240 aaKnown RBP9.09□□□□□ -0.95
USP44-207ENST00000552237 ZNF330Q9Y3S2 320 aaPredicted RBP9.09□□□□□ -0.95
USP44-207ENST00000552237 AMPD1P23109 780 aa9.08□□□□□ -0.96
USP44-207ENST00000552237 BAG6P46379 1132 aa9.08□□□□□ -0.96
USP44-207ENST00000552237 SCTRP47872 440 aa9.08□□□□□ -0.96
USP44-207ENST00000552237 TMEM259Q4ZIN3 620 aa9.08□□□□□ -0.96
USP44-207ENST00000552237 ALYREFQ86V81 257 aaKnown RBP9.08□□□□□ -0.96
USP44-207ENST00000552237 CFHR5Q9BXR6 569 aa9.08□□□□□ -0.96
USP44-207ENST00000552237 RAB6BQ9NRW1 208 aa9.08□□□□□ -0.96
USP44-207ENST00000552237 GDF2Q9UK05 429 aaPredicted RBP9.08□□□□□ -0.96
USP44-207ENST00000552237 MCCD1P59942 119 aaPredicted RBP9.07□□□□□ -0.96
USP44-207ENST00000552237 KRBA1A5PL33 1030 aa9.06□□□□□ -0.96
USP44-207ENST00000552237 CSB-PGBD3P0DP91 1061 aa9.06□□□□□ -0.96
USP44-207ENST00000552237 PHKA2P46019 1235 aa9.06□□□□□ -0.96
USP44-207ENST00000552237 PGBD3Q8N328 593 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms