RNA–Protein interactions for RNA: ENST00000552140.5

NPIPA3-203, Transcript of nuclear pore complex interacting protein family member A3, humanhuman

TSL 5 BASIC

Gene NPIPA3, Length 1,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3-203ENST00000552140 JMYQ8N9B5 988 aa10.16□□□□□ -0.78
NPIPA3-203ENST00000552140 ACSBG1Q96GR2 724 aa10.16□□□□□ -0.78
NPIPA3-203ENST00000552140 LRRC4BQ9NT99 713 aa10.16□□□□□ -0.78
NPIPA3-203ENST00000552140 PCDH10Q9P2E7 1040 aa10.16□□□□□ -0.78
NPIPA3-203ENST00000552140 CPDO75976 1380 aa10.15□□□□□ -0.78
NPIPA3-203ENST00000552140 AATKQ6ZMQ8 1374 aa10.15□□□□□ -0.78
NPIPA3-203ENST00000552140 ABTB2Q8N961 1025 aa10.15□□□□□ -0.78
NPIPA3-203ENST00000552140 BCL9O00512 1426 aa10.15□□□□□ -0.79
NPIPA3-203ENST00000552140 PNPLA7Q6ZV29 1317 aa10.14□□□□□ -0.79
NPIPA3-203ENST00000552140 TOMM70O94826 608 aa10.14□□□□□ -0.79
NPIPA3-203ENST00000552140 GCP02774 474 aa10.14□□□□□ -0.79
NPIPA3-203ENST00000552140 PAPPAQ13219 1627 aa10.14□□□□□ -0.79
NPIPA3-203ENST00000552140 TOPAZ1Q8N9V7 1692 aa10.13□□□□□ -0.79
NPIPA3-203ENST00000552140 EXOC5O00471 708 aa10.13□□□□□ -0.79
NPIPA3-203ENST00000552140 TRAK1Q9UPV9 953 aa10.13□□□□□ -0.79
NPIPA3-203ENST00000552140 EIF3AQ14152 1382 aaKnown RBP10.13□□□□□ -0.79
NPIPA3-203ENST00000552140 TULP4Q9NRJ4 1543 aa10.12□□□□□ -0.79
NPIPA3-203ENST00000552140 MIER1Q8N108 512 aa10.12□□□□□ -0.79
NPIPA3-203ENST00000552140 NUDT16Q96DE0 195 aaKnown RBP10.12□□□□□ -0.79
NPIPA3-203ENST00000552140 SPATA31E1Q6ZUB1 1445 aa10.12□□□□□ -0.79
NPIPA3-203ENST00000552140 GOLGB1Q14789 3259 aaKnown RBP10.11□□□□□ -0.79
NPIPA3-203ENST00000552140 USP19O94966 1318 aa10.11□□□□□ -0.79
NPIPA3-203ENST00000552140 COL24A1Q17RW2 1714 aa10.11□□□□□ -0.79
NPIPA3-203ENST00000552140 KCNQ4P56696 695 aa10.11□□□□□ -0.79
NPIPA3-203ENST00000552140 CDCA7Q9BWT1 371 aaPredicted RBP10.11□□□□□ -0.79
NPIPA3-203ENST00000552140 TFCP2L1Q9NZI6 479 aa10.11□□□□□ -0.79
NPIPA3-203ENST00000552140 AKAP12Q02952 1782 aa10.11□□□□□ -0.79
NPIPA3-203ENST00000552140 ACEP12821 1306 aa10.1□□□□□ -0.79
NPIPA3-203ENST00000552140 GABBR2O75899 941 aa10.1□□□□□ -0.79
NPIPA3-203ENST00000552140 MSL1Q68DK7 614 aa10.1□□□□□ -0.79
NPIPA3-203ENST00000552140 NLRP13Q86W25 1043 aa10.1□□□□□ -0.79
NPIPA3-203ENST00000552140 AXIN2Q9Y2T1 843 aa10.1□□□□□ -0.79
NPIPA3-203ENST00000552140 WDR90Q96KV7 1748 aa10.1□□□□□ -0.79
NPIPA3-203ENST00000552140 NMRK2Q9NPI5 230 aa10.09□□□□□ -0.79
NPIPA3-203ENST00000552140 WDR17Q8IZU2 1322 aa10.08□□□□□ -0.8
NPIPA3-203ENST00000552140 USP6P35125 1406 aa10.08□□□□□ -0.8
NPIPA3-203ENST00000552140 HSPA1AP0DMV8 641 aaKnown RBP10.08□□□□□ -0.8
NPIPA3-203ENST00000552140 HSPA1BP0DMV9 641 aaKnown RBP10.08□□□□□ -0.8
NPIPA3-203ENST00000552140 BRD4O60885 1362 aaPredicted RBP10.08□□□□□ -0.8
NPIPA3-203ENST00000552140 CSB-PGBD3P0DP91 1061 aa10.07□□□□□ -0.8
NPIPA3-203ENST00000552140 CD2APQ9Y5K6 639 aa10.07□□□□□ -0.8
NPIPA3-203ENST00000552140 NHSQ6T4R5 1651 aa10.06□□□□□ -0.8
NPIPA3-203ENST00000552140 POLR3AO14802 1390 aaPredicted RBP10.06□□□□□ -0.8
NPIPA3-203ENST00000552140 WNK3Q9BYP7 1800 aa10.06□□□□□ -0.8
NPIPA3-203ENST00000552140 COL23A1Q86Y22 540 aaPredicted RBP10.06□□□□□ -0.8
NPIPA3-203ENST00000552140 PLCD3Q8N3E9 789 aa10.06□□□□□ -0.8
NPIPA3-203ENST00000552140 CARD10Q9BWT7 1032 aa10.06□□□□□ -0.8
NPIPA3-203ENST00000552140 CDK19Q9BWU1 502 aa10.06□□□□□ -0.8
NPIPA3-203ENST00000552140 PODXL2Q9NZ53 605 aa10.06□□□□□ -0.8
NPIPA3-203ENST00000552140 ARHGEF28Q8N1W1 1705 aaKnown RBP10.05□□□□□ -0.8
NPIPA3-203ENST00000552140 SLC27A3Q5K4L6 730 aa10.05□□□□□ -0.8
NPIPA3-203ENST00000552140 RBM46Q8TBY0 533 aaKnown RBP10.05□□□□□ -0.8
NPIPA3-203ENST00000552140 PLEKHG3A1L390 1219 aa10.04□□□□□ -0.8
NPIPA3-203ENST00000552140 NLRP6P59044 892 aa10.04□□□□□ -0.8
NPIPA3-203ENST00000552140 BTAF1O14981 1849 aa10.04□□□□□ -0.8
NPIPA3-203ENST00000552140 QSER1Q2KHR3 1735 aa10.04□□□□□ -0.8
NPIPA3-203ENST00000552140 IGSF1Q8N6C5 1336 aa10.04□□□□□ -0.8
NPIPA3-203ENST00000552140 TUBGCP6Q96RT7 1819 aa10.03□□□□□ -0.8
NPIPA3-203ENST00000552140 C16orf71Q8IYS4 520 aaPredicted RBP10.03□□□□□ -0.8
NPIPA3-203ENST00000552140 ZNF579Q8NAF0 562 aaKnown RBP10.03□□□□□ -0.8
NPIPA3-203ENST00000552140 CCDC61Q9Y6R9 512 aa10.03□□□□□ -0.8
NPIPA3-203ENST00000552140 ITSN1Q15811 1721 aa10.02□□□□□ -0.8
NPIPA3-203ENST00000552140 TNS2Q63HR2 1409 aa10.02□□□□□ -0.81
NPIPA3-203ENST00000552140 COL18A1P39060 1754 aa10.02□□□□□ -0.81
NPIPA3-203ENST00000552140 FSTL1Q12841 308 aa10.02□□□□□ -0.81
NPIPA3-203ENST00000552140 FAM161AQ3B820 660 aa10.02□□□□□ -0.81
NPIPA3-203ENST00000552140 HS6ST3Q8IZP7 471 aa10.02□□□□□ -0.81
NPIPA3-203ENST00000552140 CIZ1Q9ULV3 898 aaPredicted RBP10.02□□□□□ -0.81
NPIPA3-203ENST00000552140 PPARGC1BQ86YN6 1023 aaKnown RBP10.01□□□□□ -0.81
NPIPA3-203ENST00000552140 ADGRB1O14514 1584 aa10.01□□□□□ -0.81
NPIPA3-203ENST00000552140 SOX12O15370 315 aa10□□□□□ -0.81
NPIPA3-203ENST00000552140 PPIP5K1Q6PFW1 1433 aa9.99□□□□□ -0.81
NPIPA3-203ENST00000552140 KAT6BQ8WYB5 2073 aa9.99□□□□□ -0.81
NPIPA3-203ENST00000552140 NKX1-1Q15270 411 aaPredicted RBP9.99□□□□□ -0.81
NPIPA3-203ENST00000552140 ARHGEF25Q86VW2 580 aa9.99□□□□□ -0.81
NPIPA3-203ENST00000552140 CCDC7Q96M83 1385 aa9.99□□□□□ -0.81
NPIPA3-203ENST00000552140 ARHGAP27Q6ZUM4 889 aa9.98□□□□□ -0.81
NPIPA3-203ENST00000552140 SYTL4Q96C24 671 aaPredicted RBP9.98□□□□□ -0.81
NPIPA3-203ENST00000552140 PHF12Q96QT6 1004 aa9.98□□□□□ -0.81
NPIPA3-203ENST00000552140 CCNL1Q9UK58 526 aaPredicted RBP9.98□□□□□ -0.81
NPIPA3-203ENST00000552140 RGPD5Q99666 1765 aa9.98□□□□□ -0.81
NPIPA3-203ENST00000552140 CPSF1Q10570 1443 aaKnown RBP9.98□□□□□ -0.81
NPIPA3-203ENST00000552140 SLIT3O75094 1523 aa9.97□□□□□ -0.81
NPIPA3-203ENST00000552140 PRIM1P49642 420 aaKnown RBP9.97□□□□□ -0.81
NPIPA3-203ENST00000552140 SMIM5Q71RC9 77 aa9.97□□□□□ -0.81
NPIPA3-203ENST00000552140 DDX54Q8TDD1 881 aaKnown RBP9.97□□□□□ -0.81
NPIPA3-203ENST00000552140 TSPYL2Q9H2G4 693 aaPredicted RBP9.97□□□□□ -0.81
NPIPA3-203ENST00000552140 RRAGCQ9HB90 399 aa9.97□□□□□ -0.81
NPIPA3-203ENST00000552140 NLRP2Q9NX02 1062 aa9.97□□□□□ -0.81
NPIPA3-203ENST00000552140 ABCC6O95255 1503 aa9.97□□□□□ -0.81
NPIPA3-203ENST00000552140 TRPM1Q7Z4N2 1603 aa9.96□□□□□ -0.81
NPIPA3-203ENST00000552140 IL2RBP14784 551 aa9.96□□□□□ -0.82
NPIPA3-203ENST00000552140 MPHOSPH9Q99550 1183 aa9.96□□□□□ -0.82
NPIPA3-203ENST00000552140 CLCN6P51797 869 aa9.95□□□□□ -0.82
NPIPA3-203ENST00000552140 FOXN1O15353 648 aa9.94□□□□□ -0.82
NPIPA3-203ENST00000552140 GTPBP6O43824 516 aaPredicted RBP9.94□□□□□ -0.82
NPIPA3-203ENST00000552140 C9orf131Q5VYM1 1079 aa9.94□□□□□ -0.82
NPIPA3-203ENST00000552140 RASEFQ8IZ41 740 aa9.94□□□□□ -0.82
NPIPA3-203ENST00000552140 SMC1BQ8NDV3 1235 aa9.94□□□□□ -0.82
NPIPA3-203ENST00000552140 BCS1LQ9Y276 419 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms