RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 EIF4A2Q14240 407 aaKnown RBP14.34□□□□□ -0.11
PTCH1-225ENST00000551845 EYA1Q99502 592 aa14.34□□□□□ -0.11
PTCH1-225ENST00000551845 TATP17735 454 aaPredicted RBP14.33□□□□□ -0.12
PTCH1-225ENST00000551845 NCBP3Q53F19 620 aaKnown RBP14.33□□□□□ -0.12
PTCH1-225ENST00000551845 USHBP1Q8N6Y0 703 aa14.33□□□□□ -0.12
PTCH1-225ENST00000551845 ZBTB7AO95365 584 aa14.32□□□□□ -0.12
PTCH1-225ENST00000551845 MARCH10Q8NA82 808 aaPredicted RBP14.31□□□□□ -0.12
PTCH1-225ENST00000551845 ZCRB1Q8TBF4 217 aaKnown RBP14.31□□□□□ -0.12
PTCH1-225ENST00000551845 DDX54Q8TDD1 881 aaKnown RBP14.31□□□□□ -0.12
PTCH1-225ENST00000551845 CFAP53Q96M91 514 aa14.31□□□□□ -0.12
PTCH1-225ENST00000551845 BCL11BQ9C0K0 894 aaPredicted RBP14.31□□□□□ -0.12
PTCH1-225ENST00000551845 CASZ1Q86V15 1759 aa14.3□□□□□ -0.12
PTCH1-225ENST00000551845 DIAPH1O60610 1272 aaKnown RBP14.3□□□□□ -0.12
PTCH1-225ENST00000551845 PPP2R1AP30153 589 aa14.3□□□□□ -0.12
PTCH1-225ENST00000551845 IL13P35225 146 aa14.3□□□□□ -0.12
PTCH1-225ENST00000551845 C1QTNF8P60827 252 aa14.3□□□□□ -0.12
PTCH1-225ENST00000551845 RALBP1Q15311 655 aa14.3□□□□□ -0.12
PTCH1-225ENST00000551845 ANO8Q9HCE9 1232 aaPredicted RBP14.3□□□□□ -0.12
PTCH1-225ENST00000551845 ATF5Q9Y2D1 282 aaPredicted RBP14.3□□□□□ -0.12
PTCH1-225ENST00000551845 OVOS2A0A0G2JMS6 1433 aa14.3□□□□□ -0.12
PTCH1-225ENST00000551845 PARP4Q9UKK3 1724 aaKnown RBP14.29□□□□□ -0.12
PTCH1-225ENST00000551845 KIF20BQ96Q89 1820 aa14.29□□□□□ -0.12
PTCH1-225ENST00000551845 PLSCR1O15162 318 aa14.29□□□□□ -0.12
PTCH1-225ENST00000551845 PDGFDQ9GZP0 370 aaPredicted RBP14.29□□□□□ -0.12
PTCH1-225ENST00000551845 RGPD3A6NKT7 1758 aaPredicted RBP14.28□□□□□ -0.12
PTCH1-225ENST00000551845 MAPK8IP2Q13387 824 aaPredicted RBP14.28□□□□□ -0.12
PTCH1-225ENST00000551845 RGPD4Q7Z3J3 1758 aa14.28□□□□□ -0.12
PTCH1-225ENST00000551845 IFFO2Q5TF58 517 aa14.27□□□□□ -0.13
PTCH1-225ENST00000551845 SULT6B1Q6IMI4 303 aa14.27□□□□□ -0.13
PTCH1-225ENST00000551845 SPG7Q9UQ90 795 aa14.27□□□□□ -0.13
PTCH1-225ENST00000551845 NUDCQ9Y266 331 aa14.27□□□□□ -0.13
PTCH1-225ENST00000551845 SBF2Q86WG5 1849 aa14.27□□□□□ -0.13
PTCH1-225ENST00000551845 LTN1O94822 1766 aa14.27□□□□□ -0.13
PTCH1-225ENST00000551845 IGSF1Q8N6C5 1336 aa14.26□□□□□ -0.13
PTCH1-225ENST00000551845 CHD4Q14839 1912 aa14.26□□□□□ -0.13
PTCH1-225ENST00000551845 PTGER2P43116 358 aa14.26□□□□□ -0.13
PTCH1-225ENST00000551845 SYT17Q9BSW7 474 aa14.26□□□□□ -0.13
PTCH1-225ENST00000551845 FHDC1Q9C0D6 1143 aaPredicted RBP14.26□□□□□ -0.13
PTCH1-225ENST00000551845 STK32BQ9NY57 414 aa14.26□□□□□ -0.13
PTCH1-225ENST00000551845 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.26□□□□□ -0.13
PTCH1-225ENST00000551845 PEAK1Q9H792 1746 aa14.25□□□□□ -0.13
PTCH1-225ENST00000551845 U2SURPO15042 1029 aaKnown RBP14.25□□□□□ -0.13
PTCH1-225ENST00000551845 PLEKHO1Q53GL0 409 aaPredicted RBP14.25□□□□□ -0.13
PTCH1-225ENST00000551845 KCNA4P22459 653 aa14.24□□□□□ -0.13
PTCH1-225ENST00000551845 AMOTQ4VCS5 1084 aa14.24□□□□□ -0.13
PTCH1-225ENST00000551845 CNKSR2Q8WXI2 1034 aa14.24□□□□□ -0.13
PTCH1-225ENST00000551845 RGPD5Q99666 1765 aa14.24□□□□□ -0.13
PTCH1-225ENST00000551845 PTF1AQ7RTS3 328 aa14.23□□□□□ -0.13
PTCH1-225ENST00000551845 LRRC37A3O60309 1634 aa14.23□□□□□ -0.13
PTCH1-225ENST00000551845 HMOX1P09601 288 aa14.22□□□□□ -0.13
PTCH1-225ENST00000551845 AEBP1Q8IUX7 1158 aa14.22□□□□□ -0.13
PTCH1-225ENST00000551845 IFNL2Q8IZJ0 200 aa14.22□□□□□ -0.13
PTCH1-225ENST00000551845 PROM2Q8N271 834 aa14.22□□□□□ -0.13
PTCH1-225ENST00000551845 ACSBG1Q96GR2 724 aa14.22□□□□□ -0.13
PTCH1-225ENST00000551845 MAP2P11137 1827 aaKnown RBP14.22□□□□□ -0.13
PTCH1-225ENST00000551845 PCDH11XQ9BZA7 1347 aa14.21□□□□□ -0.13
PTCH1-225ENST00000551845 PCDH11YQ9BZA8 1340 aa14.21□□□□□ -0.13
PTCH1-225ENST00000551845 SLC15A2Q16348 729 aa14.21□□□□□ -0.13
PTCH1-225ENST00000551845 TXNRD1Q16881 649 aa14.21□□□□□ -0.13
PTCH1-225ENST00000551845 MTFR1LQ9H019 292 aa14.21□□□□□ -0.13
PTCH1-225ENST00000551845 PRKRIP1Q9H875 184 aaPredicted RBP14.21□□□□□ -0.13
PTCH1-225ENST00000551845 BCL9O00512 1426 aa14.21□□□□□ -0.13
PTCH1-225ENST00000551845 TNS2Q63HR2 1409 aa14.21□□□□□ -0.13
PTCH1-225ENST00000551845 ANKRD26Q9UPS8 1709 aa14.21□□□□□ -0.14
PTCH1-225ENST00000551845 CYP27B1O15528 508 aa14.2□□□□□ -0.14
PTCH1-225ENST00000551845 GIGYF1O75420 1035 aaPredicted RBP14.2□□□□□ -0.14
PTCH1-225ENST00000551845 U2AF1L5P0DN76 240 aaPredicted RBP14.2□□□□□ -0.14
PTCH1-225ENST00000551845 U2AF1Q01081 240 aaKnown RBP eCLIP14.2□□□□□ -0.14
PTCH1-225ENST00000551845 SYTL4Q96C24 671 aaPredicted RBP14.2□□□□□ -0.14
PTCH1-225ENST00000551845 MEGF6O75095 1541 aa14.2□□□□□ -0.14
PTCH1-225ENST00000551845 PRIM1P49642 420 aaKnown RBP14.19□□□□□ -0.14
PTCH1-225ENST00000551845 NKX1-1Q15270 411 aaPredicted RBP14.19□□□□□ -0.14
PTCH1-225ENST00000551845 GPR162Q16538 588 aa14.19□□□□□ -0.14
PTCH1-225ENST00000551845 MYBBP1AQ9BQG0 1328 aaKnown RBP14.18□□□□□ -0.14
PTCH1-225ENST00000551845 NCAPD2Q15021 1401 aa14.18□□□□□ -0.14
PTCH1-225ENST00000551845 HSP90AB1P08238 724 aaKnown RBP14.18□□□□□ -0.14
PTCH1-225ENST00000551845 PHKG2P15735 406 aa14.18□□□□□ -0.14
PTCH1-225ENST00000551845 ARXQ96QS3 562 aa14.18□□□□□ -0.14
PTCH1-225ENST00000551845 ANP32CO43423 234 aa14.17□□□□□ -0.14
PTCH1-225ENST00000551845 FCHSD2O94868 740 aa14.17□□□□□ -0.14
PTCH1-225ENST00000551845 C1orf141Q5JVX7 400 aa14.17□□□□□ -0.14
PTCH1-225ENST00000551845 ZNF530Q6P9A1 599 aaPredicted RBP14.17□□□□□ -0.14
PTCH1-225ENST00000551845 KDRP35968 1356 aa14.17□□□□□ -0.14
PTCH1-225ENST00000551845 PLEKHG2Q9H7P9 1386 aa14.17□□□□□ -0.14
PTCH1-225ENST00000551845 WNK3Q9BYP7 1800 aa14.16□□□□□ -0.14
PTCH1-225ENST00000551845 PELP1Q8IZL8 1130 aaKnown RBP14.16□□□□□ -0.14
PTCH1-225ENST00000551845 KLHL34Q8N239 644 aa14.16□□□□□ -0.14
PTCH1-225ENST00000551845 PNNQ9H307 717 aaKnown RBP14.16□□□□□ -0.14
PTCH1-225ENST00000551845 FAM208AQ9UK61 1670 aaKnown RBP14.16□□□□□ -0.14
PTCH1-225ENST00000551845 NEFMP07197 916 aa14.15□□□□□ -0.14
PTCH1-225ENST00000551845 MPRIPQ6WCQ1 1025 aa14.15□□□□□ -0.14
PTCH1-225ENST00000551845 DCAF5Q96JK2 942 aa14.15□□□□□ -0.14
PTCH1-225ENST00000551845 SGIP1Q9BQI5 828 aa14.15□□□□□ -0.14
PTCH1-225ENST00000551845 PRKAR2BP31323 418 aa14.14□□□□□ -0.15
PTCH1-225ENST00000551845 MTHFSDQ2M296 383 aaKnown RBP14.14□□□□□ -0.15
PTCH1-225ENST00000551845 AKAP4Q5JQC9 854 aa14.14□□□□□ -0.15
PTCH1-225ENST00000551845 GAS2L2Q8NHY3 880 aa14.13□□□□□ -0.15
PTCH1-225ENST00000551845 RSPH6AQ9H0K4 717 aa14.13□□□□□ -0.15
PTCH1-225ENST00000551845 ERVV-2B6SEH9 535 aa14.12□□□□□ -0.15
PTCH1-225ENST00000551845 CABP4P57796 275 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms