RNA–Protein interactions for RNA: ENST00000551147.1

PPFIA2-222, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 4

Gene PPFIA2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-222ENST00000551147 FAM182BQ5T319 152 aa16.42■□□□□ 0.22
PPFIA2-222ENST00000551147 PLEKHG2Q9H7P9 1386 aa16.41■□□□□ 0.22
PPFIA2-222ENST00000551147 SULT6B1Q6IMI4 303 aa16.41■□□□□ 0.22
PPFIA2-222ENST00000551147 MARCH10Q8NA82 808 aaPredicted RBP16.41■□□□□ 0.22
PPFIA2-222ENST00000551147 RAPGEF4Q8WZA2 1011 aa16.41■□□□□ 0.22
PPFIA2-222ENST00000551147 HMOX1P09601 288 aa16.4■□□□□ 0.22
PPFIA2-222ENST00000551147 TATP17735 454 aaPredicted RBP16.4■□□□□ 0.22
PPFIA2-222ENST00000551147 TNS1Q9HBL0 1735 aaKnown RBP16.39■□□□□ 0.21
PPFIA2-222ENST00000551147 EXOC5O00471 708 aa16.39■□□□□ 0.21
PPFIA2-222ENST00000551147 U2SURPO15042 1029 aaKnown RBP16.39■□□□□ 0.21
PPFIA2-222ENST00000551147 ANP32CO43423 234 aa16.39■□□□□ 0.21
PPFIA2-222ENST00000551147 PDE3BQ13370 1112 aa16.39■□□□□ 0.21
PPFIA2-222ENST00000551147 CCDC125Q86Z20 511 aa16.39■□□□□ 0.21
PPFIA2-222ENST00000551147 SBF2Q86WG5 1849 aa16.39■□□□□ 0.21
PPFIA2-222ENST00000551147 DOT1LQ8TEK3 1739 aa16.39■□□□□ 0.21
PPFIA2-222ENST00000551147 TOGARAM1Q9Y4F4 1720 aa16.39■□□□□ 0.21
PPFIA2-222ENST00000551147 BCL9O00512 1426 aa16.38■□□□□ 0.21
PPFIA2-222ENST00000551147 ZCRB1Q8TBF4 217 aaKnown RBP16.38■□□□□ 0.21
PPFIA2-222ENST00000551147 NHSQ6T4R5 1651 aa16.37■□□□□ 0.21
PPFIA2-222ENST00000551147 CCDC184Q52MB2 194 aa16.37■□□□□ 0.21
PPFIA2-222ENST00000551147 RSPH6AQ9H0K4 717 aa16.36■□□□□ 0.21
PPFIA2-222ENST00000551147 PCDH11XQ9BZA7 1347 aa16.36■□□□□ 0.21
PPFIA2-222ENST00000551147 PCDH11YQ9BZA8 1340 aa16.36■□□□□ 0.21
PPFIA2-222ENST00000551147 CYP27B1O15528 508 aa16.35■□□□□ 0.21
PPFIA2-222ENST00000551147 NUDCQ9Y266 331 aa16.35■□□□□ 0.21
PPFIA2-222ENST00000551147 U2AF1L5P0DN76 240 aaPredicted RBP16.34■□□□□ 0.21
PPFIA2-222ENST00000551147 U2AF1Q01081 240 aaKnown RBP eCLIP16.34■□□□□ 0.21
PPFIA2-222ENST00000551147 DDX54Q8TDD1 881 aaKnown RBP16.34■□□□□ 0.21
PPFIA2-222ENST00000551147 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.34■□□□□ 0.21
PPFIA2-222ENST00000551147 FAM196AQ6ZSG2 479 aa16.33■□□□□ 0.2
PPFIA2-222ENST00000551147 PRKAR2BP31323 418 aa16.32■□□□□ 0.2
PPFIA2-222ENST00000551147 ADAMTS7Q9UKP4 1686 aa16.32■□□□□ 0.2
PPFIA2-222ENST00000551147 SPG7Q9UQ90 795 aa16.32■□□□□ 0.2
PPFIA2-222ENST00000551147 KDM6AO15550 1401 aaPredicted RBP16.31■□□□□ 0.2
PPFIA2-222ENST00000551147 PHKG2P15735 406 aa16.31■□□□□ 0.2
PPFIA2-222ENST00000551147 AMOTQ4VCS5 1084 aa16.3■□□□□ 0.2
PPFIA2-222ENST00000551147 PLEKHO1Q53GL0 409 aaPredicted RBP16.3■□□□□ 0.2
PPFIA2-222ENST00000551147 DIEXFQ68CQ4 756 aaKnown RBP16.3■□□□□ 0.2
PPFIA2-222ENST00000551147 ZNF530Q6P9A1 599 aaPredicted RBP16.3■□□□□ 0.2
PPFIA2-222ENST00000551147 PTF1AQ7RTS3 328 aa16.3■□□□□ 0.2
PPFIA2-222ENST00000551147 PHACTR3Q96KR7 559 aa16.3■□□□□ 0.2
PPFIA2-222ENST00000551147 BTAF1O14981 1849 aa16.3■□□□□ 0.2
PPFIA2-222ENST00000551147 FCHSD2O94868 740 aa16.29■□□□□ 0.2
PPFIA2-222ENST00000551147 MTHFSDQ2M296 383 aaKnown RBP16.29■□□□□ 0.2
PPFIA2-222ENST00000551147 ITGB4P16144 1822 aa16.29■□□□□ 0.2
PPFIA2-222ENST00000551147 VIRMAQ69YN4 1812 aaKnown RBP16.29■□□□□ 0.2
PPFIA2-222ENST00000551147 SCN11AQ9UI33 1791 aa16.28■□□□□ 0.2
PPFIA2-222ENST00000551147 KCNQ2O43526 872 aa16.28■□□□□ 0.2
PPFIA2-222ENST00000551147 TRIM37O94972 964 aa16.28■□□□□ 0.2
PPFIA2-222ENST00000551147 NKX1-1Q15270 411 aaPredicted RBP16.28■□□□□ 0.2
PPFIA2-222ENST00000551147 IFNL2Q8IZJ0 200 aa16.28■□□□□ 0.2
PPFIA2-222ENST00000551147 ACSBG1Q96GR2 724 aa16.28■□□□□ 0.2
PPFIA2-222ENST00000551147 PLEKHF1Q96S99 279 aa16.28■□□□□ 0.2
PPFIA2-222ENST00000551147 MRS2Q9HD23 443 aa16.27■□□□□ 0.2
PPFIA2-222ENST00000551147 RGPD3A6NKT7 1758 aaPredicted RBP16.26■□□□□ 0.19
PPFIA2-222ENST00000551147 RGPD4Q7Z3J3 1758 aa16.26■□□□□ 0.19
PPFIA2-222ENST00000551147 WDR43Q15061 677 aaKnown RBP eCLIP16.26■□□□□ 0.19
PPFIA2-222ENST00000551147 ADAMTS8Q9UP79 889 aa16.26■□□□□ 0.19
PPFIA2-222ENST00000551147 MRC1P22897 1456 aa16.26■□□□□ 0.19
PPFIA2-222ENST00000551147 DLG5Q8TDM6 1919 aa16.25■□□□□ 0.19
PPFIA2-222ENST00000551147 MSH5O43196 834 aa16.25■□□□□ 0.19
PPFIA2-222ENST00000551147 MAP3K5Q99683 1374 aa16.25■□□□□ 0.19
PPFIA2-222ENST00000551147 RREB1Q92766 1687 aa16.24■□□□□ 0.19
PPFIA2-222ENST00000551147 AKAP4Q5JQC9 854 aa16.24■□□□□ 0.19
PPFIA2-222ENST00000551147 PNISRQ8TF01 805 aaKnown RBP16.24■□□□□ 0.19
PPFIA2-222ENST00000551147 BCL11BQ9C0K0 894 aaPredicted RBP16.24■□□□□ 0.19
PPFIA2-222ENST00000551147 PRIM1P49642 420 aaKnown RBP16.23■□□□□ 0.19
PPFIA2-222ENST00000551147 C1orf141Q5JVX7 400 aa16.23■□□□□ 0.19
PPFIA2-222ENST00000551147 GAS2L2Q8NHY3 880 aa16.23■□□□□ 0.19
PPFIA2-222ENST00000551147 SIPA1L3O60292 1781 aaPredicted RBP16.23■□□□□ 0.19
PPFIA2-222ENST00000551147 PAPPAQ13219 1627 aa16.23■□□□□ 0.19
PPFIA2-222ENST00000551147 MPRIPQ6WCQ1 1025 aa16.22■□□□□ 0.19
PPFIA2-222ENST00000551147 DEFB132Q7Z7B7 95 aa16.22■□□□□ 0.19
PPFIA2-222ENST00000551147 CCDC146Q8IYE0 955 aa16.22■□□□□ 0.19
PPFIA2-222ENST00000551147 DCAF5Q96JK2 942 aa16.22■□□□□ 0.19
PPFIA2-222ENST00000551147 HSP90AB1P08238 724 aaKnown RBP16.21■□□□□ 0.19
PPFIA2-222ENST00000551147 MIER1Q8N108 512 aa16.21■□□□□ 0.19
PPFIA2-222ENST00000551147 LY75O60449 1722 aa16.21■□□□□ 0.19
PPFIA2-222ENST00000551147 NUP188Q5SRE5 1749 aa16.21■□□□□ 0.19
PPFIA2-222ENST00000551147 MAPK8IP3Q9UPT6 1336 aa16.2■□□□□ 0.18
PPFIA2-222ENST00000551147 SYTL4Q96C24 671 aaPredicted RBP16.2■□□□□ 0.18
PPFIA2-222ENST00000551147 LGR6Q9HBX8 967 aa16.2■□□□□ 0.18
PPFIA2-222ENST00000551147 CEMIPQ8WUJ3 1361 aa16.19■□□□□ 0.18
PPFIA2-222ENST00000551147 GNAT3A8MTJ3 354 aa16.19■□□□□ 0.18
PPFIA2-222ENST00000551147 RNMTO43148 476 aaKnown RBP16.19■□□□□ 0.18
PPFIA2-222ENST00000551147 APBA3O96018 575 aa16.19■□□□□ 0.18
PPFIA2-222ENST00000551147 NFE2L2Q16236 605 aa16.19■□□□□ 0.18
PPFIA2-222ENST00000551147 RUNDC1Q96C34 613 aa16.19■□□□□ 0.18
PPFIA2-222ENST00000551147 ERVV-2B6SEH9 535 aa16.18■□□□□ 0.18
PPFIA2-222ENST00000551147 CCER2I3L3R5 266 aa16.18■□□□□ 0.18
PPFIA2-222ENST00000551147 BAG6P46379 1132 aa16.18■□□□□ 0.18
PPFIA2-222ENST00000551147 SF3B2Q13435 895 aaKnown RBP16.18■□□□□ 0.18
PPFIA2-222ENST00000551147 PIGBQ92521 554 aa16.18■□□□□ 0.18
PPFIA2-222ENST00000551147 PNNQ9H307 717 aaKnown RBP16.18■□□□□ 0.18
PPFIA2-222ENST00000551147 KAT6BQ8WYB5 2073 aa16.17■□□□□ 0.18
PPFIA2-222ENST00000551147 EN1Q05925 392 aaPredicted RBP16.17■□□□□ 0.18
PPFIA2-222ENST00000551147 IL17REQ8NFR9 667 aa16.17■□□□□ 0.18
PPFIA2-222ENST00000551147 CAMKK2Q96RR4 588 aa16.17■□□□□ 0.18
PPFIA2-222ENST00000551147 TMOD3Q9NYL9 352 aa16.16■□□□□ 0.18
PPFIA2-222ENST00000551147 PLSCR1O15162 318 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms