RNA–Protein interactions for RNA: ENST00000550661.1

PTPRR-210, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 3

Gene PTPRR, Length 1,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-210ENST00000550661 CARD11Q9BXL7 1154 aa8.4□□□□□ -1.06
PTPRR-210ENST00000550661 RBM27Q9P2N5 1060 aaKnown RBP8.4□□□□□ -1.06
PTPRR-210ENST00000550661 SEPT9Q9UHD8 586 aaPredicted RBP8.4□□□□□ -1.06
PTPRR-210ENST00000550661 ADGRL3Q9HAR2 1447 aa8.39□□□□□ -1.07
PTPRR-210ENST00000550661 USP47Q96K76 1375 aa8.39□□□□□ -1.07
PTPRR-210ENST00000550661 FCHSD2O94868 740 aa8.39□□□□□ -1.07
PTPRR-210ENST00000550661 SIRT1Q96EB6 747 aa8.39□□□□□ -1.07
PTPRR-210ENST00000550661 TMEM94Q12767 1356 aa8.38□□□□□ -1.07
PTPRR-210ENST00000550661 NALCNQ8IZF0 1738 aa8.38□□□□□ -1.07
PTPRR-210ENST00000550661 QRICH2Q9H0J4 1663 aa8.38□□□□□ -1.07
PTPRR-210ENST00000550661 LAPTM4BQ86VI4 370 aa8.38□□□□□ -1.07
PTPRR-210ENST00000550661 PNMA3Q9UL41 463 aa8.38□□□□□ -1.07
PTPRR-210ENST00000550661 CENPJQ9HC77 1338 aaPredicted RBP8.37□□□□□ -1.07
PTPRR-210ENST00000550661 NBPF26B4DH59 902 aa8.37□□□□□ -1.07
PTPRR-210ENST00000550661 SMAPO00193 183 aa8.37□□□□□ -1.07
PTPRR-210ENST00000550661 GPIHBP1Q8IV16 184 aa8.37□□□□□ -1.07
PTPRR-210ENST00000550661 WNT2BQ93097 391 aa8.37□□□□□ -1.07
PTPRR-210ENST00000550661 PRAM1Q96QH2 718 aa8.37□□□□□ -1.07
PTPRR-210ENST00000550661 STK26Q9P289 416 aa8.37□□□□□ -1.07
PTPRR-210ENST00000550661 TRAK1Q9UPV9 953 aa8.37□□□□□ -1.07
PTPRR-210ENST00000550661 MSH6P52701 1360 aa8.36□□□□□ -1.07
PTPRR-210ENST00000550661 PLEKHH1Q9ULM0 1364 aa8.36□□□□□ -1.07
PTPRR-210ENST00000550661 FAM98CQ17RN3 349 aaKnown RBP8.36□□□□□ -1.07
PTPRR-210ENST00000550661 NUDT18Q6ZVK8 323 aa8.36□□□□□ -1.07
PTPRR-210ENST00000550661 TTC13Q8NBP0 860 aa8.36□□□□□ -1.07
PTPRR-210ENST00000550661 TATDN2Q93075 761 aa8.36□□□□□ -1.07
PTPRR-210ENST00000550661 C3orf80F5H4A9 247 aa8.35□□□□□ -1.07
PTPRR-210ENST00000550661 PROSER2Q86WR7 435 aaPredicted RBP8.35□□□□□ -1.07
PTPRR-210ENST00000550661 ANKK1Q8NFD2 765 aa8.35□□□□□ -1.07
PTPRR-210ENST00000550661 ZFRQ96KR1 1074 aaKnown RBP8.35□□□□□ -1.07
PTPRR-210ENST00000550661 POGKQ9P215 609 aa8.35□□□□□ -1.07
PTPRR-210ENST00000550661 XIRP1Q702N8 1843 aaKnown RBP8.35□□□□□ -1.07
PTPRR-210ENST00000550661 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.34□□□□□ -1.07
PTPRR-210ENST00000550661 TULP4Q9NRJ4 1543 aa8.34□□□□□ -1.07
PTPRR-210ENST00000550661 EIF4G2P78344 907 aaKnown RBP eCLIP8.34□□□□□ -1.07
PTPRR-210ENST00000550661 HIC1Q14526 733 aa8.34□□□□□ -1.07
PTPRR-210ENST00000550661 GPR37O15354 613 aa8.33□□□□□ -1.08
PTPRR-210ENST00000550661 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.33□□□□□ -1.08
PTPRR-210ENST00000550661 ANKARQ7Z5J8 1434 aa8.33□□□□□ -1.08
PTPRR-210ENST00000550661 WAPLQ7Z5K2 1190 aa8.33□□□□□ -1.08
PTPRR-210ENST00000550661 C14orf37Q86TY3 774 aa8.33□□□□□ -1.08
PTPRR-210ENST00000550661 FMN2Q9NZ56 1722 aa8.33□□□□□ -1.08
PTPRR-210ENST00000550661 GNPATO15228 680 aa8.32□□□□□ -1.08
PTPRR-210ENST00000550661 PTPN5P54829 565 aa8.32□□□□□ -1.08
PTPRR-210ENST00000550661 THSD4Q6ZMP0 1018 aa8.32□□□□□ -1.08
PTPRR-210ENST00000550661 C19orf44Q9H6X5 657 aa8.32□□□□□ -1.08
PTPRR-210ENST00000550661 HCSTQ9UBK5 93 aa8.32□□□□□ -1.08
PTPRR-210ENST00000550661 ATP7BP35670 1465 aa8.32□□□□□ -1.08
PTPRR-210ENST00000550661 TOPAZ1Q8N9V7 1692 aa8.31□□□□□ -1.08
PTPRR-210ENST00000550661 MST1RQ04912 1400 aa8.31□□□□□ -1.08
PTPRR-210ENST00000550661 ST20-MTHFSA0A0A6YYL1 179 aa8.31□□□□□ -1.08
PTPRR-210ENST00000550661 SAFB2Q14151 953 aaKnown RBP eCLIP8.31□□□□□ -1.08
PTPRR-210ENST00000550661 FAM161AQ3B820 660 aa8.31□□□□□ -1.08
PTPRR-210ENST00000550661 LMOD2Q6P5Q4 547 aa8.31□□□□□ -1.08
PTPRR-210ENST00000550661 TESK2Q96S53 571 aa8.31□□□□□ -1.08
PTPRR-210ENST00000550661 EVC2Q86UK5 1308 aa8.3□□□□□ -1.08
PTPRR-210ENST00000550661 MINK1Q8N4C8 1332 aaPredicted RBP8.3□□□□□ -1.08
PTPRR-210ENST00000550661 HSPA5P11021 654 aaKnown RBP8.3□□□□□ -1.08
PTPRR-210ENST00000550661 ATF3P18847 181 aa8.3□□□□□ -1.08
PTPRR-210ENST00000550661 FECHP22830 423 aa8.3□□□□□ -1.08
PTPRR-210ENST00000550661 BCAMP50895 628 aa8.3□□□□□ -1.08
PTPRR-210ENST00000550661 ATAD2Q6PL18 1390 aa8.3□□□□□ -1.08
PTPRR-210ENST00000550661 C1orf167Q5SNV9 1468 aa8.3□□□□□ -1.08
PTPRR-210ENST00000550661 KIF1AQ12756 1690 aa8.3□□□□□ -1.08
PTPRR-210ENST00000550661 USP32Q8NFA0 1604 aa8.29□□□□□ -1.08
PTPRR-210ENST00000550661 ITSN1Q15811 1721 aa8.29□□□□□ -1.08
PTPRR-210ENST00000550661 SOWAHBA6NEL2 793 aa8.29□□□□□ -1.08
PTPRR-210ENST00000550661 WASLO00401 505 aaPredicted RBP8.29□□□□□ -1.08
PTPRR-210ENST00000550661 TMF1P82094 1093 aa8.29□□□□□ -1.08
PTPRR-210ENST00000550661 CDCA8Q53HL2 280 aa8.29□□□□□ -1.08
PTPRR-210ENST00000550661 RBM46Q8TBY0 533 aaKnown RBP8.29□□□□□ -1.08
PTPRR-210ENST00000550661 LRCH3Q96II8 777 aa8.29□□□□□ -1.08
PTPRR-210ENST00000550661 HIRIP3Q9BW71 556 aaPredicted RBP8.29□□□□□ -1.08
PTPRR-210ENST00000550661 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.29□□□□□ -1.08
PTPRR-210ENST00000550661 ADGRG1Q9Y653 693 aa8.29□□□□□ -1.08
PTPRR-210ENST00000550661 DISP3Q9P2K9 1392 aa8.29□□□□□ -1.08
PTPRR-210ENST00000550661 NINLQ9Y2I6 1382 aa8.29□□□□□ -1.08
PTPRR-210ENST00000550661 SAMD7Q7Z3H4 446 aa8.28□□□□□ -1.08
PTPRR-210ENST00000550661 PUS7Q96PZ0 661 aaKnown RBP8.28□□□□□ -1.08
PTPRR-210ENST00000550661 EYA1Q99502 592 aa8.28□□□□□ -1.08
PTPRR-210ENST00000550661 SRPK2P78362 688 aaKnown RBP8.27□□□□□ -1.09
PTPRR-210ENST00000550661 TOM1O60784 492 aa8.26□□□□□ -1.09
PTPRR-210ENST00000550661 OATP04181 439 aa8.26□□□□□ -1.09
PTPRR-210ENST00000550661 CDK19Q9BWU1 502 aa8.26□□□□□ -1.09
PTPRR-210ENST00000550661 MYOM1P52179 1685 aa8.26□□□□□ -1.09
PTPRR-210ENST00000550661 ROBO1Q9Y6N7 1651 aa8.26□□□□□ -1.09
PTPRR-210ENST00000550661 PPIP5K1Q6PFW1 1433 aa8.26□□□□□ -1.09
PTPRR-210ENST00000550661 PRR36Q9H6K5 1346 aa8.26□□□□□ -1.09
PTPRR-210ENST00000550661 AHDC1Q5TGY3 1603 aaPredicted RBP8.25□□□□□ -1.09
PTPRR-210ENST00000550661 UBAP1LF5GYI3 381 aa8.25□□□□□ -1.09
PTPRR-210ENST00000550661 RNF40O75150 1001 aa8.25□□□□□ -1.09
PTPRR-210ENST00000550661 SWT1Q5T5J6 900 aaKnown RBP8.25□□□□□ -1.09
PTPRR-210ENST00000550661 SLAIN2Q9P270 581 aa8.25□□□□□ -1.09
PTPRR-210ENST00000550661 HPS5Q9UPZ3 1129 aa8.25□□□□□ -1.09
PTPRR-210ENST00000550661 NHSL1Q5SYE7 1610 aa8.25□□□□□ -1.09
PTPRR-210ENST00000550661 POLR3AO14802 1390 aaPredicted RBP8.24□□□□□ -1.09
PTPRR-210ENST00000550661 RCCD1A6NED2 376 aa8.24□□□□□ -1.09
PTPRR-210ENST00000550661 DNAJB2P25686 324 aa8.24□□□□□ -1.09
PTPRR-210ENST00000550661 PXYLP1Q8TE99 480 aa8.24□□□□□ -1.09
PTPRR-210ENST00000550661 NUDT16Q96DE0 195 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms