RNA–Protein interactions for RNA: ENST00000550647.5

RAB3IP-213, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-213ENST00000550647 OXLD1Q5BKU9 147 aa8.6□□□□□ -1.03
RAB3IP-213ENST00000550647 RBM19Q9Y4C8 960 aaKnown RBP8.59□□□□□ -1.03
RAB3IP-213ENST00000550647 TPCN2Q8NHX9 752 aa8.58□□□□□ -1.04
RAB3IP-213ENST00000550647 ZNF516Q92618 1163 aa8.58□□□□□ -1.04
RAB3IP-213ENST00000550647 FCF1Q9Y324 198 aaKnown RBP8.58□□□□□ -1.04
RAB3IP-213ENST00000550647 MAP4K5Q9Y4K4 846 aa8.58□□□□□ -1.04
RAB3IP-213ENST00000550647 LINC01559Q495D7 138 aa8.57□□□□□ -1.04
RAB3IP-213ENST00000550647 NOM1Q5C9Z4 860 aaKnown RBP8.57□□□□□ -1.04
RAB3IP-213ENST00000550647 S1PR4O95977 384 aa8.56□□□□□ -1.04
RAB3IP-213ENST00000550647 WEE1P30291 646 aa8.56□□□□□ -1.04
RAB3IP-213ENST00000550647 SH3BP2P78314 561 aa8.56□□□□□ -1.04
RAB3IP-213ENST00000550647 AGERQ15109 404 aa8.56□□□□□ -1.04
RAB3IP-213ENST00000550647 COL26A1Q96A83 441 aa8.56□□□□□ -1.04
RAB3IP-213ENST00000550647 PCDHB11Q9Y5F2 797 aa8.56□□□□□ -1.04
RAB3IP-213ENST00000550647 UNCXA6NJT0 531 aa8.55□□□□□ -1.04
RAB3IP-213ENST00000550647 SFI1A8K8P3 1242 aa8.55□□□□□ -1.04
RAB3IP-213ENST00000550647 ICMTO60725 284 aa8.55□□□□□ -1.04
RAB3IP-213ENST00000550647 MARSP56192 900 aaKnown RBP8.55□□□□□ -1.04
RAB3IP-213ENST00000550647 IGSF5Q9NSI5 407 aa8.55□□□□□ -1.04
RAB3IP-213ENST00000550647 PLA2G2EQ9NZK7 142 aa8.55□□□□□ -1.04
RAB3IP-213ENST00000550647 WASLO00401 505 aaPredicted RBP8.54□□□□□ -1.04
RAB3IP-213ENST00000550647 PRMT3O60678 531 aa8.54□□□□□ -1.04
RAB3IP-213ENST00000550647 VARSP26640 1264 aaKnown RBP8.53□□□□□ -1.04
RAB3IP-213ENST00000550647 WNT7BP56706 349 aa8.53□□□□□ -1.04
RAB3IP-213ENST00000550647 C21orf2O43822 256 aa8.52□□□□□ -1.05
RAB3IP-213ENST00000550647 PTCD1O75127 700 aaKnown RBP8.52□□□□□ -1.05
RAB3IP-213ENST00000550647 SCNN1AP37088 669 aa8.52□□□□□ -1.05
RAB3IP-213ENST00000550647 PSME1Q06323 249 aa8.52□□□□□ -1.05
RAB3IP-213ENST00000550647 SF3B2Q13435 895 aaKnown RBP8.52□□□□□ -1.05
RAB3IP-213ENST00000550647 ECM1Q16610 540 aa8.52□□□□□ -1.05
RAB3IP-213ENST00000550647 NPAS4Q8IUM7 802 aa8.52□□□□□ -1.05
RAB3IP-213ENST00000550647 TRIM52Q96A61 297 aa8.52□□□□□ -1.05
RAB3IP-213ENST00000550647 PRIMPOLQ96LW4 560 aa8.52□□□□□ -1.05
RAB3IP-213ENST00000550647 KCTD15Q96SI1 283 aaPredicted RBP8.52□□□□□ -1.05
RAB3IP-213ENST00000550647 MYCP01106 439 aaPredicted RBP8.51□□□□□ -1.05
RAB3IP-213ENST00000550647 ERVK-9P63128 1117 aa8.51□□□□□ -1.05
RAB3IP-213ENST00000550647 NKX2-3Q8TAU0 364 aa8.51□□□□□ -1.05
RAB3IP-213ENST00000550647 ZNF16P17020 682 aaPredicted RBP8.5□□□□□ -1.05
RAB3IP-213ENST00000550647 IGFBP4P22692 258 aa8.5□□□□□ -1.05
RAB3IP-213ENST00000550647 COL19A1Q14993 1142 aa8.5□□□□□ -1.05
RAB3IP-213ENST00000550647 INTS6LQ5JSJ4 861 aaKnown RBP8.5□□□□□ -1.05
RAB3IP-213ENST00000550647 MPNDQ8N594 471 aa8.5□□□□□ -1.05
RAB3IP-213ENST00000550647 TMEM229AB2RXF0 380 aa8.49□□□□□ -1.05
RAB3IP-213ENST00000550647 FOXO3O43524 673 aa8.49□□□□□ -1.05
RAB3IP-213ENST00000550647 NPR3P17342 541 aa8.49□□□□□ -1.05
RAB3IP-213ENST00000550647 TRIM32Q13049 653 aa8.49□□□□□ -1.05
RAB3IP-213ENST00000550647 IFFO2Q5TF58 517 aa8.49□□□□□ -1.05
RAB3IP-213ENST00000550647 ANKLE1Q8NAG6 615 aa8.49□□□□□ -1.05
RAB3IP-213ENST00000550647 TSEN2Q8NCE0 465 aaKnown RBP8.49□□□□□ -1.05
RAB3IP-213ENST00000550647 GAS2L2Q8NHY3 880 aa8.49□□□□□ -1.05
RAB3IP-213ENST00000550647 CDK15Q96Q40 435 aa8.49□□□□□ -1.05
RAB3IP-213ENST00000550647 ZNF358Q9NW07 568 aa8.49□□□□□ -1.05
RAB3IP-213ENST00000550647 BIN2Q9UBW5 565 aaPredicted RBP8.49□□□□□ -1.05
RAB3IP-213ENST00000550647 H3BRB1 525 aa8.48□□□□□ -1.05
RAB3IP-213ENST00000550647 FKBP4Q02790 459 aaKnown RBP eCLIP8.48□□□□□ -1.05
RAB3IP-213ENST00000550647 FKBP5Q13451 457 aaPredicted RBP8.48□□□□□ -1.05
RAB3IP-213ENST00000550647 GTF3C2Q8WUA4 911 aaPredicted RBP8.48□□□□□ -1.05
RAB3IP-213ENST00000550647 HINFPQ9BQA5 517 aa8.48□□□□□ -1.05
RAB3IP-213ENST00000550647 TUT1Q9H6E5 874 aaKnown RBP8.48□□□□□ -1.05
RAB3IP-213ENST00000550647 KIAA1522Q9P206 1035 aaPredicted RBP8.48□□□□□ -1.05
RAB3IP-213ENST00000550647 ANKRD33BA6NCL7 494 aa8.47□□□□□ -1.05
RAB3IP-213ENST00000550647 ERVH48-1M5A8F1 160 aa8.47□□□□□ -1.05
RAB3IP-213ENST00000550647 ITGBL1O95965 494 aaPredicted RBP8.47□□□□□ -1.05
RAB3IP-213ENST00000550647 VAMP1P23763 118 aa8.47□□□□□ -1.05
RAB3IP-213ENST00000550647 SCTRP47872 440 aa8.47□□□□□ -1.05
RAB3IP-213ENST00000550647 RPIAP49247 311 aa8.47□□□□□ -1.05
RAB3IP-213ENST00000550647 ARHGAP4P98171 946 aa8.47□□□□□ -1.05
RAB3IP-213ENST00000550647 ZNF211Q13398 564 aaPredicted RBP8.47□□□□□ -1.05
RAB3IP-213ENST00000550647 CC2D2BQ6DHV5 1058 aa8.47□□□□□ -1.05
RAB3IP-213ENST00000550647 GLYCTKQ8IVS8 523 aa8.47□□□□□ -1.05
RAB3IP-213ENST00000550647 ASB16Q96NS5 453 aa8.47□□□□□ -1.05
RAB3IP-213ENST00000550647 BCL2L13Q9BXK5 485 aa8.47□□□□□ -1.05
RAB3IP-213ENST00000550647 DCTN4Q9UJW0 460 aa8.47□□□□□ -1.05
RAB3IP-213ENST00000550647 DNMT3AQ9Y6K1 912 aaPredicted RBP8.47□□□□□ -1.05
RAB3IP-213ENST00000550647 ZBTB24O43167 697 aaPredicted RBP8.46□□□□□ -1.06
RAB3IP-213ENST00000550647 ABL1P00519 1130 aa8.46□□□□□ -1.06
RAB3IP-213ENST00000550647 SCNN1DP51172 638 aa8.46□□□□□ -1.06
RAB3IP-213ENST00000550647 EPHA4P54764 986 aa8.46□□□□□ -1.06
RAB3IP-213ENST00000550647 SKOR1P84550 965 aa8.46□□□□□ -1.06
RAB3IP-213ENST00000550647 VASH1Q7L8A9 365 aaPredicted RBP8.46□□□□□ -1.06
RAB3IP-213ENST00000550647 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.46□□□□□ -1.06
RAB3IP-213ENST00000550647 SEPT3Q9UH03 358 aa8.46□□□□□ -1.06
RAB3IP-213ENST00000550647 BACH1O14867 736 aa8.45□□□□□ -1.06
RAB3IP-213ENST00000550647 FBXO33Q7Z6M2 555 aa8.45□□□□□ -1.06
RAB3IP-213ENST00000550647 HELQQ8TDG4 1101 aa8.45□□□□□ -1.06
RAB3IP-213ENST00000550647 OSBPL3Q9H4L5 887 aa8.45□□□□□ -1.06
RAB3IP-213ENST00000550647 RNF223E7ERA6 249 aa8.44□□□□□ -1.06
RAB3IP-213ENST00000550647 DHX9Q08211 1270 aaKnown RBP8.44□□□□□ -1.06
RAB3IP-213ENST00000550647 STAG2Q8N3U4 1231 aa8.44□□□□□ -1.06
RAB3IP-213ENST00000550647 MRRFQ96E11 262 aaKnown RBP8.44□□□□□ -1.06
RAB3IP-213ENST00000550647 SLC4A9Q96Q91 983 aa8.44□□□□□ -1.06
RAB3IP-213ENST00000550647 GDF10P55107 478 aa8.43□□□□□ -1.06
RAB3IP-213ENST00000550647 RGL4Q8IZJ4 473 aa8.43□□□□□ -1.06
RAB3IP-213ENST00000550647 GIPC2Q8TF65 315 aa8.43□□□□□ -1.06
RAB3IP-213ENST00000550647 PURBQ96QR8 312 aaKnown RBP8.43□□□□□ -1.06
RAB3IP-213ENST00000550647 INHAP05111 366 aa8.42□□□□□ -1.06
RAB3IP-213ENST00000550647 GGCXP38435 758 aa8.42□□□□□ -1.06
RAB3IP-213ENST00000550647 KCNC4Q03721 635 aa8.42□□□□□ -1.06
RAB3IP-213ENST00000550647 ZNF326Q5BKZ1 582 aaKnown RBP8.42□□□□□ -1.06
RAB3IP-213ENST00000550647 PLA2G2CQ5R387 149 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms