RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 FANCIQ9NVI1 1328 aa16.27■□□□□ 0.2
CACNB3-217ENST00000550483 AMOTQ4VCS5 1084 aa16.26■□□□□ 0.19
CACNB3-217ENST00000550483 RTF1Q92541 710 aaKnown RBP16.26■□□□□ 0.19
CACNB3-217ENST00000550483 ERBB3P21860 1342 aa16.25■□□□□ 0.19
CACNB3-217ENST00000550483 ANKRD24Q8TF21 1146 aa16.25■□□□□ 0.19
CACNB3-217ENST00000550483 CFAP44Q96MT7 982 aa16.25■□□□□ 0.19
CACNB3-217ENST00000550483 TRPC5Q9UL62 973 aaPredicted RBP16.25■□□□□ 0.19
CACNB3-217ENST00000550483 ZNF853P0CG23 659 aa16.24■□□□□ 0.19
CACNB3-217ENST00000550483 BABAM1Q9NWV8 329 aa16.24■□□□□ 0.19
CACNB3-217ENST00000550483 MS4A1P11836 297 aa16.23■□□□□ 0.19
CACNB3-217ENST00000550483 LTV1Q96GA3 475 aaPredicted RBP16.23■□□□□ 0.19
CACNB3-217ENST00000550483 LMO7Q8WWI1 1683 aa16.23■□□□□ 0.19
CACNB3-217ENST00000550483 ZBTB7CA1YPR0 619 aa16.22■□□□□ 0.19
CACNB3-217ENST00000550483 MTHFSDQ2M296 383 aaKnown RBP16.22■□□□□ 0.19
CACNB3-217ENST00000550483 FNBP4Q8N3X1 1017 aaPredicted RBP16.22■□□□□ 0.19
CACNB3-217ENST00000550483 MAP3K5Q99683 1374 aa16.22■□□□□ 0.19
CACNB3-217ENST00000550483 GNAT3A8MTJ3 354 aa16.21■□□□□ 0.19
CACNB3-217ENST00000550483 ZC3H6P61129 1189 aaKnown RBP16.21■□□□□ 0.19
CACNB3-217ENST00000550483 AAMPQ13685 434 aa16.21■□□□□ 0.19
CACNB3-217ENST00000550483 ALDH1L2Q3SY69 923 aa16.21■□□□□ 0.19
CACNB3-217ENST00000550483 PLEKHO1Q53GL0 409 aaPredicted RBP16.21■□□□□ 0.19
CACNB3-217ENST00000550483 NBPF6Q5VWK0 638 aa16.21■□□□□ 0.19
CACNB3-217ENST00000550483 NBPF4Q96M43 638 aa16.21■□□□□ 0.19
CACNB3-217ENST00000550483 COL18A1P39060 1754 aa16.21■□□□□ 0.18
CACNB3-217ENST00000550483 OVOS2A0A0G2JMS6 1433 aa16.2■□□□□ 0.18
CACNB3-217ENST00000550483 DLG5Q8TDM6 1919 aa16.2■□□□□ 0.18
CACNB3-217ENST00000550483 RARSP54136 660 aaKnown RBP16.2■□□□□ 0.18
CACNB3-217ENST00000550483 PDE3AQ14432 1141 aa16.2■□□□□ 0.18
CACNB3-217ENST00000550483 KIAA0232Q92628 1395 aa16.2■□□□□ 0.18
CACNB3-217ENST00000550483 SOS1Q07889 1333 aaPredicted RBP16.19■□□□□ 0.18
CACNB3-217ENST00000550483 DEFB132Q7Z7B7 95 aa16.19■□□□□ 0.18
CACNB3-217ENST00000550483 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.19■□□□□ 0.18
CACNB3-217ENST00000550483 ABCA3Q99758 1704 aa16.19■□□□□ 0.18
CACNB3-217ENST00000550483 COL22A1Q8NFW1 1626 aaPredicted RBP16.19■□□□□ 0.18
CACNB3-217ENST00000550483 BRPF1P55201 1214 aaPredicted RBP16.18■□□□□ 0.18
CACNB3-217ENST00000550483 IRX6P78412 446 aaPredicted RBP16.18■□□□□ 0.18
CACNB3-217ENST00000550483 EXOSC9Q06265 439 aaKnown RBP16.18■□□□□ 0.18
CACNB3-217ENST00000550483 CCDC125Q86Z20 511 aa16.18■□□□□ 0.18
CACNB3-217ENST00000550483 PRDM11Q9NQV5 511 aa16.18■□□□□ 0.18
CACNB3-217ENST00000550483 LRRC37A3O60309 1634 aa16.18■□□□□ 0.18
CACNB3-217ENST00000550483 ATRNO75882 1429 aa16.18■□□□□ 0.18
CACNB3-217ENST00000550483 KIF16BQ96L93 1317 aa16.18■□□□□ 0.18
CACNB3-217ENST00000550483 CHL1O00533 1208 aa16.17■□□□□ 0.18
CACNB3-217ENST00000550483 CANXP27824 592 aaKnown RBP16.17■□□□□ 0.18
CACNB3-217ENST00000550483 AKAP4Q5JQC9 854 aa16.17■□□□□ 0.18
CACNB3-217ENST00000550483 TSR2Q969E8 191 aaKnown RBP16.17■□□□□ 0.18
CACNB3-217ENST00000550483 CHMP4AQ9BY43 222 aa16.17■□□□□ 0.18
CACNB3-217ENST00000550483 AXIN2Q9Y2T1 843 aa16.17■□□□□ 0.18
CACNB3-217ENST00000550483 CRB1P82279 1406 aa16.17■□□□□ 0.18
CACNB3-217ENST00000550483 CSB-PGBD3P0DP91 1061 aa16.16■□□□□ 0.18
CACNB3-217ENST00000550483 RAPGEF4Q8WZA2 1011 aa16.16■□□□□ 0.18
CACNB3-217ENST00000550483 MBIPQ9NS73 344 aa16.16■□□□□ 0.18
CACNB3-217ENST00000550483 IPO8O15397 1037 aaKnown RBP16.15■□□□□ 0.18
CACNB3-217ENST00000550483 C1orf141Q5JVX7 400 aa16.15■□□□□ 0.18
CACNB3-217ENST00000550483 CABLES1Q8TDN4 633 aa16.15■□□□□ 0.18
CACNB3-217ENST00000550483 LAS1LQ9Y4W2 734 aaKnown RBP16.15■□□□□ 0.18
CACNB3-217ENST00000550483 WDR17Q8IZU2 1322 aa16.15■□□□□ 0.18
CACNB3-217ENST00000550483 TATP17735 454 aaPredicted RBP16.14■□□□□ 0.17
CACNB3-217ENST00000550483 GJD4Q96KN9 370 aaPredicted RBP16.14■□□□□ 0.17
CACNB3-217ENST00000550483 NLRP2Q9NX02 1062 aa16.14■□□□□ 0.17
CACNB3-217ENST00000550483 CEMIPQ8WUJ3 1361 aa16.13■□□□□ 0.17
CACNB3-217ENST00000550483 FAM83GA6ND36 823 aa16.13■□□□□ 0.17
CACNB3-217ENST00000550483 BCAR3O75815 825 aa16.13■□□□□ 0.17
CACNB3-217ENST00000550483 ZKSCAN2Q63HK3 967 aa16.13■□□□□ 0.17
CACNB3-217ENST00000550483 MCM10Q7L590 875 aa16.13■□□□□ 0.17
CACNB3-217ENST00000550483 USHBP1Q8N6Y0 703 aa16.13■□□□□ 0.17
CACNB3-217ENST00000550483 THUMPD2Q9BTF0 503 aaKnown RBP16.13■□□□□ 0.17
CACNB3-217ENST00000550483 SMC4Q9NTJ3 1288 aa16.13■□□□□ 0.17
CACNB3-217ENST00000550483 SPG7Q9UQ90 795 aa16.13■□□□□ 0.17
CACNB3-217ENST00000550483 COL5A2P05997 1499 aaPredicted RBP16.13■□□□□ 0.17
CACNB3-217ENST00000550483 BCL9LQ86UU0 1499 aa16.12■□□□□ 0.17
CACNB3-217ENST00000550483 PLEKHG5O94827 1062 aa16.12■□□□□ 0.17
CACNB3-217ENST00000550483 TWISTNBQ3B726 338 aaPredicted RBP16.12■□□□□ 0.17
CACNB3-217ENST00000550483 ZNF530Q6P9A1 599 aaPredicted RBP16.12■□□□□ 0.17
CACNB3-217ENST00000550483 HSP90AB1P08238 724 aaKnown RBP16.11■□□□□ 0.17
CACNB3-217ENST00000550483 DCTN1Q14203 1278 aa16.11■□□□□ 0.17
CACNB3-217ENST00000550483 TAF7Q15545 349 aaPredicted RBP16.11■□□□□ 0.17
CACNB3-217ENST00000550483 ARHGAP45Q92619 1136 aa16.11■□□□□ 0.17
CACNB3-217ENST00000550483 CCDC136Q96JN2 1154 aa16.11■□□□□ 0.17
CACNB3-217ENST00000550483 TSPYL4Q9UJ04 414 aa16.11■□□□□ 0.17
CACNB3-217ENST00000550483 COL14A1Q05707 1796 aaKnown RBP16.1■□□□□ 0.17
CACNB3-217ENST00000550483 PSDA5PKW4 1024 aaPredicted RBP16.1■□□□□ 0.17
CACNB3-217ENST00000550483 PLIN1O60240 522 aa16.1■□□□□ 0.17
CACNB3-217ENST00000550483 VAMP4O75379 141 aa16.1■□□□□ 0.17
CACNB3-217ENST00000550483 CHRNA2Q15822 529 aa16.1■□□□□ 0.17
CACNB3-217ENST00000550483 CARD10Q9BWT7 1032 aa16.1■□□□□ 0.17
CACNB3-217ENST00000550483 CHMP4BQ9H444 224 aaKnown RBP16.1■□□□□ 0.17
CACNB3-217ENST00000550483 RGPD5Q99666 1765 aa16.1■□□□□ 0.17
CACNB3-217ENST00000550483 RGPD2P0DJD1 1756 aa16.09■□□□□ 0.17
CACNB3-217ENST00000550483 EXOC6Q8TAG9 804 aa16.09■□□□□ 0.17
CACNB3-217ENST00000550483 SSH1Q8WYL5 1049 aa16.09■□□□□ 0.17
CACNB3-217ENST00000550483 CRBNQ96SW2 442 aa16.09■□□□□ 0.17
CACNB3-217ENST00000550483 IL17REQ8NFR9 667 aa16.08■□□□□ 0.16
CACNB3-217ENST00000550483 ADAMTS7Q9UKP4 1686 aa16.08■□□□□ 0.16
CACNB3-217ENST00000550483 PARP4Q9UKK3 1724 aaKnown RBP16.08■□□□□ 0.16
CACNB3-217ENST00000550483 HOXB7P09629 217 aa16.07■□□□□ 0.16
CACNB3-217ENST00000550483 TEFQ10587 303 aa16.07■□□□□ 0.16
CACNB3-217ENST00000550483 TOM1L2Q6ZVM7 507 aa16.07■□□□□ 0.16
CACNB3-217ENST00000550483 FTSJ3Q8IY81 847 aaKnown RBP16.07■□□□□ 0.16
CACNB3-217ENST00000550483 IFNL2Q8IZJ0 200 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms