RNA–Protein interactions for RNA: ENST00000550380.5

LINC02407-201, Transcript of long intergenic non-protein coding RNA 2407, humanhuman

TSL 4

Gene LINC02407, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02407-201ENST00000550380 LTV1Q96GA3 475 aaPredicted RBP16.24■□□□□ 0.19
LINC02407-201ENST00000550380 THRAP3Q9Y2W1 955 aaKnown RBP16.24■□□□□ 0.19
LINC02407-201ENST00000550380 MAP3K5Q99683 1374 aa16.24■□□□□ 0.19
LINC02407-201ENST00000550380 SLIT2O94813 1529 aa16.24■□□□□ 0.19
LINC02407-201ENST00000550380 GNAT3A8MTJ3 354 aa16.23■□□□□ 0.19
LINC02407-201ENST00000550380 TATP17735 454 aaPredicted RBP16.23■□□□□ 0.19
LINC02407-201ENST00000550380 DUSP27Q5VZP5 1158 aa16.23■□□□□ 0.19
LINC02407-201ENST00000550380 NLRP2Q9NX02 1062 aa16.23■□□□□ 0.19
LINC02407-201ENST00000550380 SPG7Q9UQ90 795 aa16.23■□□□□ 0.19
LINC02407-201ENST00000550380 SOS1Q07889 1333 aaPredicted RBP16.22■□□□□ 0.19
LINC02407-201ENST00000550380 WNK3Q9BYP7 1800 aa16.22■□□□□ 0.19
LINC02407-201ENST00000550380 HSP90AB1P08238 724 aaKnown RBP16.22■□□□□ 0.19
LINC02407-201ENST00000550380 EVA1CP58658 441 aa16.22■□□□□ 0.19
LINC02407-201ENST00000550380 CHRNA2Q15822 529 aa16.22■□□□□ 0.19
LINC02407-201ENST00000550380 AKAP4Q5JQC9 854 aa16.22■□□□□ 0.19
LINC02407-201ENST00000550380 CFAP44Q96MT7 982 aa16.22■□□□□ 0.19
LINC02407-201ENST00000550380 NEUROD2Q15784 382 aa16.21■□□□□ 0.19
LINC02407-201ENST00000550380 MTHFSDQ2M296 383 aaKnown RBP16.21■□□□□ 0.19
LINC02407-201ENST00000550380 TOM1L2Q6ZVM7 507 aa16.21■□□□□ 0.19
LINC02407-201ENST00000550380 CHMP4AQ9BY43 222 aa16.21■□□□□ 0.19
LINC02407-201ENST00000550380 BTG4Q9NY30 223 aa16.2■□□□□ 0.18
LINC02407-201ENST00000550380 RRP7AQ9Y3A4 280 aaKnown RBP16.2■□□□□ 0.18
LINC02407-201ENST00000550380 SALL2Q9Y467 1007 aaPredicted RBP16.2■□□□□ 0.18
LINC02407-201ENST00000550380 CEMIPQ8WUJ3 1361 aa16.2■□□□□ 0.18
LINC02407-201ENST00000550380 VIRMAQ69YN4 1812 aaKnown RBP16.19■□□□□ 0.18
LINC02407-201ENST00000550380 ZNF853P0CG23 659 aa16.19■□□□□ 0.18
LINC02407-201ENST00000550380 C1orf141Q5JVX7 400 aa16.19■□□□□ 0.18
LINC02407-201ENST00000550380 IL2RBP14784 551 aa16.18■□□□□ 0.18
LINC02407-201ENST00000550380 ERICH6BQ5W0A0 696 aa16.18■□□□□ 0.18
LINC02407-201ENST00000550380 SCN11AQ9UI33 1791 aa16.18■□□□□ 0.18
LINC02407-201ENST00000550380 RNF123Q5XPI4 1314 aa16.18■□□□□ 0.18
LINC02407-201ENST00000550380 PCDH11XQ9BZA7 1347 aa16.18■□□□□ 0.18
LINC02407-201ENST00000550380 PCDH11YQ9BZA8 1340 aa16.18■□□□□ 0.18
LINC02407-201ENST00000550380 FNBP4Q8N3X1 1017 aaPredicted RBP16.17■□□□□ 0.18
LINC02407-201ENST00000550380 CDCA7LQ96GN5 454 aa16.17■□□□□ 0.18
LINC02407-201ENST00000550380 MEGF6O75095 1541 aa16.17■□□□□ 0.18
LINC02407-201ENST00000550380 IFNL2Q8IZJ0 200 aa16.16■□□□□ 0.18
LINC02407-201ENST00000550380 RCAN3Q9UKA8 241 aa16.16■□□□□ 0.18
LINC02407-201ENST00000550380 DISP2A7MBM2 1401 aa16.16■□□□□ 0.18
LINC02407-201ENST00000550380 MRC1P22897 1456 aa16.16■□□□□ 0.18
LINC02407-201ENST00000550380 PLEKHG5O94827 1062 aa16.15■□□□□ 0.18
LINC02407-201ENST00000550380 ZNF530Q6P9A1 599 aaPredicted RBP16.15■□□□□ 0.18
LINC02407-201ENST00000550380 SIPA1L3O60292 1781 aaPredicted RBP16.15■□□□□ 0.18
LINC02407-201ENST00000550380 LRP6O75581 1613 aa16.15■□□□□ 0.18
LINC02407-201ENST00000550380 FANCIQ9NVI1 1328 aa16.15■□□□□ 0.18
LINC02407-201ENST00000550380 CHL1O00533 1208 aa16.14■□□□□ 0.17
LINC02407-201ENST00000550380 HSPA1LP34931 641 aa16.14■□□□□ 0.17
LINC02407-201ENST00000550380 BARGINQ6ZT62 677 aa16.14■□□□□ 0.17
LINC02407-201ENST00000550380 UNC5CLQ8IV45 518 aa16.14■□□□□ 0.17
LINC02407-201ENST00000550380 USHBP1Q8N6Y0 703 aa16.14■□□□□ 0.17
LINC02407-201ENST00000550380 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.14■□□□□ 0.17
LINC02407-201ENST00000550380 DCAF5Q96JK2 942 aa16.14■□□□□ 0.17
LINC02407-201ENST00000550380 CACNA1FO60840 1977 aa16.14■□□□□ 0.17
LINC02407-201ENST00000550380 NEFLP07196 543 aa16.13■□□□□ 0.17
LINC02407-201ENST00000550380 LARP1Q6PKG0 1096 aaKnown RBP16.13■□□□□ 0.17
LINC02407-201ENST00000550380 SPATA31A1Q5TZJ5 1347 aa16.13■□□□□ 0.17
LINC02407-201ENST00000550380 KDM3BQ7LBC6 1761 aa16.13■□□□□ 0.17
LINC02407-201ENST00000550380 SHANK3Q9BYB0 1731 aa16.12■□□□□ 0.17
LINC02407-201ENST00000550380 NKX1-1Q15270 411 aaPredicted RBP16.12■□□□□ 0.17
LINC02407-201ENST00000550380 VPS72Q15906 364 aa16.12■□□□□ 0.17
LINC02407-201ENST00000550380 ZCRB1Q8TBF4 217 aaKnown RBP16.12■□□□□ 0.17
LINC02407-201ENST00000550380 STRN4Q9NRL3 753 aa16.12■□□□□ 0.17
LINC02407-201ENST00000550380 SPATA31A5Q5VU36 1347 aa16.12■□□□□ 0.17
LINC02407-201ENST00000550380 SPATA31A7Q8IWB4 1347 aa16.12■□□□□ 0.17
LINC02407-201ENST00000550380 ADAMTS2O95450 1211 aa16.11■□□□□ 0.17
LINC02407-201ENST00000550380 PHKG2P15735 406 aa16.11■□□□□ 0.17
LINC02407-201ENST00000550380 BRPF1P55201 1214 aaPredicted RBP16.11■□□□□ 0.17
LINC02407-201ENST00000550380 TAF7Q15545 349 aaPredicted RBP16.11■□□□□ 0.17
LINC02407-201ENST00000550380 ALDH1L2Q3SY69 923 aa16.11■□□□□ 0.17
LINC02407-201ENST00000550380 SPINK5Q9NQ38 1064 aaPredicted RBP16.11■□□□□ 0.17
LINC02407-201ENST00000550380 TNS2Q63HR2 1409 aa16.11■□□□□ 0.17
LINC02407-201ENST00000550380 BCL9LQ86UU0 1499 aa16.1■□□□□ 0.17
LINC02407-201ENST00000550380 HOXB7P09629 217 aa16.1■□□□□ 0.17
LINC02407-201ENST00000550380 ERVV-2B6SEH9 535 aa16.09■□□□□ 0.17
LINC02407-201ENST00000550380 TEFQ10587 303 aa16.09■□□□□ 0.17
LINC02407-201ENST00000550380 NGLY1Q96IV0 654 aa16.09■□□□□ 0.17
LINC02407-201ENST00000550380 NUTM2BA6NNL0 878 aaPredicted RBP16.08■□□□□ 0.16
LINC02407-201ENST00000550380 NUTM2EB1AL46 878 aaPredicted RBP16.08■□□□□ 0.16
LINC02407-201ENST00000550380 RNMTO43148 476 aaKnown RBP16.08■□□□□ 0.16
LINC02407-201ENST00000550380 MS4A1P11836 297 aa16.08■□□□□ 0.16
LINC02407-201ENST00000550380 MCM10Q7L590 875 aa16.08■□□□□ 0.16
LINC02407-201ENST00000550380 NUTM2AQ8IVF1 878 aaPredicted RBP16.08■□□□□ 0.16
LINC02407-201ENST00000550380 IL17REQ8NFR9 667 aa16.08■□□□□ 0.16
LINC02407-201ENST00000550380 MBIPQ9NS73 344 aa16.08■□□□□ 0.16
LINC02407-201ENST00000550380 KIF16BQ96L93 1317 aa16.06■□□□□ 0.16
LINC02407-201ENST00000550380 FBXO41Q8TF61 875 aa16.06■□□□□ 0.16
LINC02407-201ENST00000550380 KDM6AO15550 1401 aaPredicted RBP16.05■□□□□ 0.16
LINC02407-201ENST00000550380 EXOC5O00471 708 aa16.05■□□□□ 0.16
LINC02407-201ENST00000550380 CYP27B1O15528 508 aa16.05■□□□□ 0.16
LINC02407-201ENST00000550380 RRP1P56182 461 aaKnown RBP16.05■□□□□ 0.16
LINC02407-201ENST00000550380 AAMPQ13685 434 aa16.05■□□□□ 0.16
LINC02407-201ENST00000550380 MEX3CQ5U5Q3 659 aaKnown RBP16.05■□□□□ 0.16
LINC02407-201ENST00000550380 C8orf37Q96NL8 207 aa16.05■□□□□ 0.16
LINC02407-201ENST00000550380 TSPYL4Q9UJ04 414 aa16.05■□□□□ 0.16
LINC02407-201ENST00000550380 SUPT16HQ9Y5B9 1047 aaKnown RBP16.05■□□□□ 0.16
LINC02407-201ENST00000550380 RARSP54136 660 aaKnown RBP16.04■□□□□ 0.16
LINC02407-201ENST00000550380 EXOSC9Q06265 439 aaKnown RBP16.04■□□□□ 0.16
LINC02407-201ENST00000550380 SLC52A2Q9HAB3 445 aa16.04■□□□□ 0.16
LINC02407-201ENST00000550380 USP21Q9UK80 565 aa16.04■□□□□ 0.16
LINC02407-201ENST00000550380 THSD7AQ9UPZ6 1657 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms