RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 MKNK1Q9BUB5 465 aa9.45□□□□□ -0.9
HCFC2-204ENST00000550335 KRTAP3-3Q9BYR6 98 aa9.45□□□□□ -0.9
HCFC2-204ENST00000550335 KRTAP3-2Q9BYR7 98 aa9.45□□□□□ -0.9
HCFC2-204ENST00000550335 PCDHGA11Q9Y5H2 935 aa9.45□□□□□ -0.9
HCFC2-204ENST00000550335 MARSP56192 900 aaKnown RBP9.44□□□□□ -0.9
HCFC2-204ENST00000550335 ARID5BQ14865 1188 aa9.44□□□□□ -0.9
HCFC2-204ENST00000550335 GAS2L2Q8NHY3 880 aa9.44□□□□□ -0.9
HCFC2-204ENST00000550335 CXXC1Q9P0U4 656 aaPredicted RBP9.44□□□□□ -0.9
HCFC2-204ENST00000550335 DKK1O94907 266 aa9.43□□□□□ -0.9
HCFC2-204ENST00000550335 ZNF211Q13398 564 aaPredicted RBP9.43□□□□□ -0.9
HCFC2-204ENST00000550335 KCTD15Q96SI1 283 aaPredicted RBP9.43□□□□□ -0.9
HCFC2-204ENST00000550335 VASH1Q7L8A9 365 aaPredicted RBP9.42□□□□□ -0.9
HCFC2-204ENST00000550335 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.42□□□□□ -0.9
HCFC2-204ENST00000550335 TSEN2Q8NCE0 465 aaKnown RBP9.42□□□□□ -0.9
HCFC2-204ENST00000550335 CDV3Q9UKY7 258 aaKnown RBP9.41□□□□□ -0.9
HCFC2-204ENST00000550335 ESPNB1AK53 854 aa9.4□□□□□ -0.9
HCFC2-204ENST00000550335 H3BRB1 525 aa9.4□□□□□ -0.9
HCFC2-204ENST00000550335 GLYCTKQ8IVS8 523 aa9.4□□□□□ -0.9
HCFC2-204ENST00000550335 SEPT12Q8IYM1 358 aa9.4□□□□□ -0.9
HCFC2-204ENST00000550335 TUT1Q9H6E5 874 aaKnown RBP9.4□□□□□ -0.9
HCFC2-204ENST00000550335 OCLNQ16625 522 aa9.39□□□□□ -0.91
HCFC2-204ENST00000550335 C1orf216Q8TAB5 229 aa9.39□□□□□ -0.91
HCFC2-204ENST00000550335 C1QTNF2Q9BXJ5 285 aa9.39□□□□□ -0.91
HCFC2-204ENST00000550335 PCDH10Q9P2E7 1040 aa9.39□□□□□ -0.91
HCFC2-204ENST00000550335 SEPT3Q9UH03 358 aa9.39□□□□□ -0.91
HCFC2-204ENST00000550335 ERVH48-1M5A8F1 160 aa9.38□□□□□ -0.91
HCFC2-204ENST00000550335 SCTRP47872 440 aa9.38□□□□□ -0.91
HCFC2-204ENST00000550335 NAA30Q147X3 362 aaPredicted RBP9.38□□□□□ -0.91
HCFC2-204ENST00000550335 TAS1R3Q7RTX0 852 aa9.38□□□□□ -0.91
HCFC2-204ENST00000550335 GTF3C2Q8WUA4 911 aaPredicted RBP9.38□□□□□ -0.91
HCFC2-204ENST00000550335 UNCXA6NJT0 531 aa9.37□□□□□ -0.91
HCFC2-204ENST00000550335 DNAJC14Q6Y2X3 702 aaPredicted RBP9.37□□□□□ -0.91
HCFC2-204ENST00000550335 TRMT44Q8IYL2 757 aaKnown RBP9.37□□□□□ -0.91
HCFC2-204ENST00000550335 BCL2L13Q9BXK5 485 aa9.37□□□□□ -0.91
HCFC2-204ENST00000550335 ANKRD33BA6NCL7 494 aa9.36□□□□□ -0.91
HCFC2-204ENST00000550335 STAU1O95793 577 aaKnown RBP9.36□□□□□ -0.91
HCFC2-204ENST00000550335 ERCC3P19447 782 aa9.36□□□□□ -0.91
HCFC2-204ENST00000550335 VARSP26640 1264 aaKnown RBP9.36□□□□□ -0.91
HCFC2-204ENST00000550335 TRIM32Q13049 653 aa9.36□□□□□ -0.91
HCFC2-204ENST00000550335 MTMR3Q13615 1198 aa9.36□□□□□ -0.91
HCFC2-204ENST00000550335 INTS6LQ5JSJ4 861 aaKnown RBP9.36□□□□□ -0.91
HCFC2-204ENST00000550335 CAPN12Q6ZSI9 719 aa9.36□□□□□ -0.91
HCFC2-204ENST00000550335 CCDC125Q86Z20 511 aa9.36□□□□□ -0.91
HCFC2-204ENST00000550335 EHBP1Q8NDI1 1231 aa9.36□□□□□ -0.91
HCFC2-204ENST00000550335 CHMP7Q8WUX9 453 aaPredicted RBP9.36□□□□□ -0.91
HCFC2-204ENST00000550335 SERTAD1Q9UHV2 236 aa9.36□□□□□ -0.91
HCFC2-204ENST00000550335 MAPK1P28482 360 aa9.35□□□□□ -0.91
HCFC2-204ENST00000550335 PURBQ96QR8 312 aaKnown RBP9.35□□□□□ -0.91
HCFC2-204ENST00000550335 CYLDQ9NQC7 956 aa9.35□□□□□ -0.91
HCFC2-204ENST00000550335 TMPRSS4Q9NRS4 437 aa9.35□□□□□ -0.91
HCFC2-204ENST00000550335 ZNF358Q9NW07 568 aa9.35□□□□□ -0.91
HCFC2-204ENST00000550335 RBM47A0AV96 593 aaKnown RBP9.34□□□□□ -0.91
HCFC2-204ENST00000550335 RNF223E7ERA6 249 aa9.34□□□□□ -0.91
HCFC2-204ENST00000550335 ICMTO60725 284 aa9.34□□□□□ -0.91
HCFC2-204ENST00000550335 SKOR1P84550 965 aa9.34□□□□□ -0.91
HCFC2-204ENST00000550335 KCNC4Q03721 635 aa9.34□□□□□ -0.91
HCFC2-204ENST00000550335 FKBP5Q13451 457 aaPredicted RBP9.34□□□□□ -0.91
HCFC2-204ENST00000550335 TNS4Q8IZW8 715 aa9.34□□□□□ -0.91
HCFC2-204ENST00000550335 GIPC2Q8TF65 315 aa9.34□□□□□ -0.91
HCFC2-204ENST00000550335 SCG3Q8WXD2 468 aaKnown RBP9.34□□□□□ -0.91
HCFC2-204ENST00000550335 DNMT3AQ9Y6K1 912 aaPredicted RBP9.34□□□□□ -0.91
HCFC2-204ENST00000550335 WEE1P30291 646 aa9.33□□□□□ -0.92
HCFC2-204ENST00000550335 GGCXP38435 758 aa9.33□□□□□ -0.92
HCFC2-204ENST00000550335 NOM1Q5C9Z4 860 aaKnown RBP9.33□□□□□ -0.92
HCFC2-204ENST00000550335 PLA2G2CQ5R387 149 aa9.33□□□□□ -0.92
HCFC2-204ENST00000550335 CC2D2BQ6DHV5 1058 aa9.33□□□□□ -0.92
HCFC2-204ENST00000550335 VTI1AQ96AJ9 217 aa9.33□□□□□ -0.92
HCFC2-204ENST00000550335 EGFL7Q9UHF1 273 aa9.33□□□□□ -0.92
HCFC2-204ENST00000550335 GDF10P55107 478 aa9.32□□□□□ -0.92
HCFC2-204ENST00000550335 FKBP4Q02790 459 aaKnown RBP eCLIP9.32□□□□□ -0.92
HCFC2-204ENST00000550335 MRRFQ96E11 262 aaKnown RBP9.32□□□□□ -0.92
HCFC2-204ENST00000550335 PTCD1O75127 700 aaKnown RBP9.31□□□□□ -0.92
HCFC2-204ENST00000550335 FSHRP23945 695 aa9.31□□□□□ -0.92
HCFC2-204ENST00000550335 TMEM229AB2RXF0 380 aa9.3□□□□□ -0.92
HCFC2-204ENST00000550335 M0R2N6 131 aa9.3□□□□□ -0.92
HCFC2-204ENST00000550335 BACH1O14867 736 aa9.3□□□□□ -0.92
HCFC2-204ENST00000550335 C21orf2O43822 256 aa9.3□□□□□ -0.92
HCFC2-204ENST00000550335 ZNF16P17020 682 aaPredicted RBP9.3□□□□□ -0.92
HCFC2-204ENST00000550335 WNT7BP56706 349 aa9.3□□□□□ -0.92
HCFC2-204ENST00000550335 ATAD2Q6PL18 1390 aa9.29□□□□□ -0.92
HCFC2-204ENST00000550335 CD2BP2O95400 341 aaKnown RBP9.29□□□□□ -0.92
HCFC2-204ENST00000550335 RC3H1Q5TC82 1133 aaKnown RBP9.29□□□□□ -0.92
HCFC2-204ENST00000550335 ANKLE1Q8NAG6 615 aa9.29□□□□□ -0.92
HCFC2-204ENST00000550335 OSBPL3Q9H4L5 887 aa9.29□□□□□ -0.92
HCFC2-204ENST00000550335 MAP4K5Q9Y4K4 846 aa9.29□□□□□ -0.92
HCFC2-204ENST00000550335 ERVK-9P63128 1117 aa9.28□□□□□ -0.92
HCFC2-204ENST00000550335 DHX9Q08211 1270 aaKnown RBP9.28□□□□□ -0.92
HCFC2-204ENST00000550335 SF3B2Q13435 895 aaKnown RBP9.28□□□□□ -0.92
HCFC2-204ENST00000550335 AAMPQ13685 434 aa9.28□□□□□ -0.92
HCFC2-204ENST00000550335 ZNF326Q5BKZ1 582 aaKnown RBP9.28□□□□□ -0.92
HCFC2-204ENST00000550335 TBCELQ5QJ74 424 aa9.28□□□□□ -0.92
HCFC2-204ENST00000550335 CDAN1Q8IWY9 1227 aa9.28□□□□□ -0.92
HCFC2-204ENST00000550335 ZNF784Q8NCA9 323 aaPredicted RBP9.28□□□□□ -0.92
HCFC2-204ENST00000550335 TLL2Q9Y6L7 1015 aa9.28□□□□□ -0.92
HCFC2-204ENST00000550335 IGFBP4P22692 258 aa9.27□□□□□ -0.93
HCFC2-204ENST00000550335 TRIM52Q96A61 297 aa9.27□□□□□ -0.93
HCFC2-204ENST00000550335 TSPAN10Q9H1Z9 355 aaPredicted RBP9.27□□□□□ -0.93
HCFC2-204ENST00000550335 DCTN4Q9UJW0 460 aa9.27□□□□□ -0.93
HCFC2-204ENST00000550335 PPP1R12BO60237 982 aaPredicted RBP9.26□□□□□ -0.93
HCFC2-204ENST00000550335 INHAP05111 366 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms