RNA–Protein interactions for RNA: ENST00000550228.5

GPN3-207, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 353 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-207ENST00000550228 OVOS2A0A0G2JMS6 1433 aa10.7□□□□□ -0.7
GPN3-207ENST00000550228 SPATA31A1Q5TZJ5 1347 aa10.7□□□□□ -0.7
GPN3-207ENST00000550228 SPATA31A5Q5VU36 1347 aa10.7□□□□□ -0.7
GPN3-207ENST00000550228 SPATA31A7Q8IWB4 1347 aa10.7□□□□□ -0.7
GPN3-207ENST00000550228 IL2RBP14784 551 aa10.7□□□□□ -0.7
GPN3-207ENST00000550228 ZNF530Q6P9A1 599 aaPredicted RBP10.7□□□□□ -0.7
GPN3-207ENST00000550228 GAS2L2Q8NHY3 880 aa10.7□□□□□ -0.7
GPN3-207ENST00000550228 VPS72Q15906 364 aa10.69□□□□□ -0.7
GPN3-207ENST00000550228 VIRMAQ69YN4 1812 aaKnown RBP10.69□□□□□ -0.7
GPN3-207ENST00000550228 SHANK3Q9BYB0 1731 aa10.69□□□□□ -0.7
GPN3-207ENST00000550228 DISP2A7MBM2 1401 aa10.68□□□□□ -0.7
GPN3-207ENST00000550228 MAP3K5Q99683 1374 aa10.68□□□□□ -0.7
GPN3-207ENST00000550228 LMOD3Q0VAK6 560 aa10.68□□□□□ -0.7
GPN3-207ENST00000550228 AMOTQ4VCS5 1084 aa10.68□□□□□ -0.7
GPN3-207ENST00000550228 THUMPD2Q9BTF0 503 aaKnown RBP10.68□□□□□ -0.7
GPN3-207ENST00000550228 TRIM35Q9UPQ4 493 aa10.68□□□□□ -0.7
GPN3-207ENST00000550228 SPG7Q9UQ90 795 aa10.68□□□□□ -0.7
GPN3-207ENST00000550228 ATRNO75882 1429 aa10.67□□□□□ -0.7
GPN3-207ENST00000550228 A0A0G2JS52 829 aa10.67□□□□□ -0.7
GPN3-207ENST00000550228 MYT1Q01538 1121 aa10.67□□□□□ -0.7
GPN3-207ENST00000550228 DCTN1Q14203 1278 aa10.67□□□□□ -0.7
GPN3-207ENST00000550228 C1orf141Q5JVX7 400 aa10.67□□□□□ -0.7
GPN3-207ENST00000550228 WWC1Q8IX03 1113 aa10.67□□□□□ -0.7
GPN3-207ENST00000550228 NGEFQ8N5V2 710 aa10.67□□□□□ -0.7
GPN3-207ENST00000550228 GLI3P10071 1580 aa10.67□□□□□ -0.7
GPN3-207ENST00000550228 LRRC37A3O60309 1634 aa10.66□□□□□ -0.7
GPN3-207ENST00000550228 ZNF521Q96K83 1311 aa10.66□□□□□ -0.7
GPN3-207ENST00000550228 GNAT3A8MTJ3 354 aa10.66□□□□□ -0.7
GPN3-207ENST00000550228 FAM98CQ17RN3 349 aaKnown RBP10.66□□□□□ -0.7
GPN3-207ENST00000550228 CCDC27Q2M243 656 aa10.66□□□□□ -0.7
GPN3-207ENST00000550228 MCM10Q7L590 875 aa10.66□□□□□ -0.7
GPN3-207ENST00000550228 ZCRB1Q8TBF4 217 aaKnown RBP10.66□□□□□ -0.7
GPN3-207ENST00000550228 RTF1Q92541 710 aaKnown RBP10.66□□□□□ -0.7
GPN3-207ENST00000550228 TRPC5Q9UL62 973 aaPredicted RBP10.66□□□□□ -0.7
GPN3-207ENST00000550228 THRAP3Q9Y2W1 955 aaKnown RBP10.66□□□□□ -0.7
GPN3-207ENST00000550228 PLEKHG2Q9H7P9 1386 aa10.65□□□□□ -0.7
GPN3-207ENST00000550228 PCDH11XQ9BZA7 1347 aa10.65□□□□□ -0.7
GPN3-207ENST00000550228 PCDH11YQ9BZA8 1340 aa10.65□□□□□ -0.7
GPN3-207ENST00000550228 GOLGA2Q08379 1002 aa10.65□□□□□ -0.7
GPN3-207ENST00000550228 AKAP4Q5JQC9 854 aa10.65□□□□□ -0.7
GPN3-207ENST00000550228 DDX54Q8TDD1 881 aaKnown RBP10.65□□□□□ -0.7
GPN3-207ENST00000550228 CDCA7LQ96GN5 454 aa10.65□□□□□ -0.7
GPN3-207ENST00000550228 PHF23Q9BUL5 403 aaPredicted RBP10.65□□□□□ -0.7
GPN3-207ENST00000550228 QTRT2Q9H974 415 aaKnown RBP10.65□□□□□ -0.7
GPN3-207ENST00000550228 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.65□□□□□ -0.71e-6■■■■■ 29.5
GPN3-207ENST00000550228 TNS2Q63HR2 1409 aa10.65□□□□□ -0.7
GPN3-207ENST00000550228 SCN11AQ9UI33 1791 aa10.65□□□□□ -0.71
GPN3-207ENST00000550228 CYP27B1O15528 508 aa10.64□□□□□ -0.71
GPN3-207ENST00000550228 CENPBP07199 599 aaPredicted RBP10.64□□□□□ -0.71
GPN3-207ENST00000550228 PHKG2P15735 406 aa10.64□□□□□ -0.71
GPN3-207ENST00000550228 NCBP3Q53F19 620 aaKnown RBP10.64□□□□□ -0.71
GPN3-207ENST00000550228 MPRIPQ6WCQ1 1025 aa10.64□□□□□ -0.71
GPN3-207ENST00000550228 BARGINQ6ZT62 677 aa10.64□□□□□ -0.71
GPN3-207ENST00000550228 ILDR1Q86SU0 546 aaPredicted RBP10.64□□□□□ -0.71
GPN3-207ENST00000550228 IFNL2Q8IZJ0 200 aa10.64□□□□□ -0.71
GPN3-207ENST00000550228 GJD4Q96KN9 370 aaPredicted RBP10.64□□□□□ -0.71
GPN3-207ENST00000550228 CDCA7Q9BWT1 371 aaPredicted RBP10.64□□□□□ -0.71
GPN3-207ENST00000550228 LAS1LQ9Y4W2 734 aaKnown RBP10.64□□□□□ -0.71
GPN3-207ENST00000550228 THSD7AQ9UPZ6 1657 aa10.63□□□□□ -0.71
GPN3-207ENST00000550228 EXOC5O00471 708 aa10.63□□□□□ -0.71
GPN3-207ENST00000550228 HTATSF1O43719 755 aaKnown RBP10.63□□□□□ -0.71
GPN3-207ENST00000550228 PDE3BQ13370 1112 aa10.63□□□□□ -0.71
GPN3-207ENST00000550228 DDB1Q16531 1140 aa10.63□□□□□ -0.71
GPN3-207ENST00000550228 ZNF772Q68DY9 489 aaPredicted RBP10.63□□□□□ -0.71
GPN3-207ENST00000550228 WDR63Q8IWG1 891 aa10.63□□□□□ -0.71
GPN3-207ENST00000550228 LGR6Q9HBX8 967 aa10.63□□□□□ -0.71
GPN3-207ENST00000550228 SPINK5Q9NQ38 1064 aaPredicted RBP10.63□□□□□ -0.71
GPN3-207ENST00000550228 KDM6AO15550 1401 aaPredicted RBP10.62□□□□□ -0.71
GPN3-207ENST00000550228 RNMTO43148 476 aaKnown RBP10.62□□□□□ -0.71
GPN3-207ENST00000550228 CALD1Q05682 793 aaKnown RBP10.62□□□□□ -0.71
GPN3-207ENST00000550228 IL17REQ8NFR9 667 aa10.62□□□□□ -0.71
GPN3-207ENST00000550228 ADAMTS7Q9UKP4 1686 aa10.62□□□□□ -0.71
GPN3-207ENST00000550228 TOGARAM1Q9Y4F4 1720 aa10.61□□□□□ -0.71
GPN3-207ENST00000550228 KAT6BQ8WYB5 2073 aa10.61□□□□□ -0.71
GPN3-207ENST00000550228 E9PSI1 815 aa10.61□□□□□ -0.71
GPN3-207ENST00000550228 HSP90AB1P08238 724 aaKnown RBP10.61□□□□□ -0.71
GPN3-207ENST00000550228 SLFN5Q08AF3 891 aa10.61□□□□□ -0.71
GPN3-207ENST00000550228 TSR2Q969E8 191 aaKnown RBP10.61□□□□□ -0.71
GPN3-207ENST00000550228 DOT1LQ8TEK3 1739 aa10.61□□□□□ -0.71
GPN3-207ENST00000550228 IL16Q14005 1332 aa10.6□□□□□ -0.71
GPN3-207ENST00000550228 SIPA1L3O60292 1781 aaPredicted RBP10.6□□□□□ -0.71
GPN3-207ENST00000550228 GNAI1P63096 354 aa10.6□□□□□ -0.71
GPN3-207ENST00000550228 TEFQ10587 303 aa10.6□□□□□ -0.71
GPN3-207ENST00000550228 MYH16Q9H6N6 1097 aa10.6□□□□□ -0.71
GPN3-207ENST00000550228 IFT57Q9NWB7 429 aa10.6□□□□□ -0.71
GPN3-207ENST00000550228 CEMIPQ8WUJ3 1361 aa10.6□□□□□ -0.71
GPN3-207ENST00000550228 FANCIQ9NVI1 1328 aa10.59□□□□□ -0.71
GPN3-207ENST00000550228 BRWD3Q6RI45 1802 aa10.59□□□□□ -0.71
GPN3-207ENST00000550228 DUSP27Q5VZP5 1158 aa10.59□□□□□ -0.71
GPN3-207ENST00000550228 SEPT12Q8IYM1 358 aa10.59□□□□□ -0.71
GPN3-207ENST00000550228 DCAF5Q96JK2 942 aa10.59□□□□□ -0.71
GPN3-207ENST00000550228 MIS18AQ9NYP9 233 aa10.59□□□□□ -0.71
GPN3-207ENST00000550228 ITGB4P16144 1822 aa10.58□□□□□ -0.72
GPN3-207ENST00000550228 KDM3BQ7LBC6 1761 aa10.58□□□□□ -0.72
GPN3-207ENST00000550228 MRC1P22897 1456 aa10.58□□□□□ -0.72
GPN3-207ENST00000550228 RBM6P78332 1123 aaKnown RBP10.58□□□□□ -0.72
GPN3-207ENST00000550228 MARCH10Q8NA82 808 aaPredicted RBP10.58□□□□□ -0.72
GPN3-207ENST00000550228 CFAP44Q96MT7 982 aa10.58□□□□□ -0.72
GPN3-207ENST00000550228 MBIPQ9NS73 344 aa10.58□□□□□ -0.72
GPN3-207ENST00000550228 RGS17Q9UGC6 210 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms