RNA–Protein interactions for RNA: ENST00000550190.1

CACNB3-215, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 424 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-215ENST00000550190 RUNDC1Q96C34 613 aa11.92□□□□□ -0.5
CACNB3-215ENST00000550190 NCAPD2Q15021 1401 aa11.92□□□□□ -0.5
CACNB3-215ENST00000550190 MEGF6O75095 1541 aa11.91□□□□□ -0.5
CACNB3-215ENST00000550190 RXRBP28702 533 aa11.91□□□□□ -0.5
CACNB3-215ENST00000550190 RBM6P78332 1123 aaKnown RBP11.91□□□□□ -0.5
CACNB3-215ENST00000550190 PLEKHO1Q53GL0 409 aaPredicted RBP11.91□□□□□ -0.5
CACNB3-215ENST00000550190 POTEAQ6S8J7 498 aa11.91□□□□□ -0.5
CACNB3-215ENST00000550190 BARGINQ6ZT62 677 aa11.91□□□□□ -0.5
CACNB3-215ENST00000550190 PHACTR3Q96KR7 559 aa11.91□□□□□ -0.5
CACNB3-215ENST00000550190 DLG5Q8TDM6 1919 aa11.9□□□□□ -0.5
CACNB3-215ENST00000550190 EXOC5O00471 708 aa11.9□□□□□ -0.5
CACNB3-215ENST00000550190 NEUROD2Q15784 382 aa11.9□□□□□ -0.5
CACNB3-215ENST00000550190 ZCRB1Q8TBF4 217 aaKnown RBP11.9□□□□□ -0.5
CACNB3-215ENST00000550190 PLEKHF1Q96S99 279 aa11.9□□□□□ -0.5
CACNB3-215ENST00000550190 CDCA7Q9BWT1 371 aaPredicted RBP11.9□□□□□ -0.5
CACNB3-215ENST00000550190 SPG7Q9UQ90 795 aa11.9□□□□□ -0.5
CACNB3-215ENST00000550190 DISP2A7MBM2 1401 aa11.89□□□□□ -0.51
CACNB3-215ENST00000550190 APAF1O14727 1248 aa11.89□□□□□ -0.51
CACNB3-215ENST00000550190 DDB1Q16531 1140 aa11.89□□□□□ -0.51
CACNB3-215ENST00000550190 MTHFSDQ2M296 383 aaKnown RBP11.89□□□□□ -0.51
CACNB3-215ENST00000550190 AMOTQ4VCS5 1084 aa11.89□□□□□ -0.51
CACNB3-215ENST00000550190 DDX54Q8TDD1 881 aaKnown RBP11.89□□□□□ -0.51
CACNB3-215ENST00000550190 RRP7AQ9Y3A4 280 aaKnown RBP11.89□□□□□ -0.51
CACNB3-215ENST00000550190 SALL2Q9Y467 1007 aaPredicted RBP11.89□□□□□ -0.51
CACNB3-215ENST00000550190 PKD1L3Q7Z443 1732 aa11.89□□□□□ -0.51
CACNB3-215ENST00000550190 VIRMAQ69YN4 1812 aaKnown RBP11.88□□□□□ -0.51
CACNB3-215ENST00000550190 KAT6BQ8WYB5 2073 aa11.88□□□□□ -0.51
CACNB3-215ENST00000550190 OVOS2A0A0G2JMS6 1433 aa11.88□□□□□ -0.51
CACNB3-215ENST00000550190 ZNF530Q6P9A1 599 aaPredicted RBP11.88□□□□□ -0.51
CACNB3-215ENST00000550190 SEPT12Q8IYM1 358 aa11.88□□□□□ -0.51
CACNB3-215ENST00000550190 BRWD3Q6RI45 1802 aa11.88□□□□□ -0.51
CACNB3-215ENST00000550190 LRRC37A3O60309 1634 aa11.87□□□□□ -0.51
CACNB3-215ENST00000550190 SHANK3Q9BYB0 1731 aa11.87□□□□□ -0.51
CACNB3-215ENST00000550190 PDE3BQ13370 1112 aa11.87□□□□□ -0.51
CACNB3-215ENST00000550190 C1orf141Q5JVX7 400 aa11.87□□□□□ -0.51
CACNB3-215ENST00000550190 GAS2L2Q8NHY3 880 aa11.87□□□□□ -0.51
CACNB3-215ENST00000550190 THSD7AQ9UPZ6 1657 aa11.87□□□□□ -0.51
CACNB3-215ENST00000550190 TMPOP42166 694 aaKnown RBP11.86□□□□□ -0.51
CACNB3-215ENST00000550190 RIPK4P57078 832 aa11.86□□□□□ -0.51
CACNB3-215ENST00000550190 NFE2L2Q16236 605 aa11.86□□□□□ -0.51
CACNB3-215ENST00000550190 IFNL2Q8IZJ0 200 aa11.86□□□□□ -0.51
CACNB3-215ENST00000550190 YTHDC1Q96MU7 727 aaKnown RBP11.86□□□□□ -0.51
CACNB3-215ENST00000550190 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.86□□□□□ -0.51
CACNB3-215ENST00000550190 PCDH11XQ9BZA7 1347 aa11.86□□□□□ -0.51
CACNB3-215ENST00000550190 PCDH11YQ9BZA8 1340 aa11.86□□□□□ -0.51
CACNB3-215ENST00000550190 ONECUT3O60422 494 aaPredicted RBP11.85□□□□□ -0.51
CACNB3-215ENST00000550190 HNRNPUQ00839 825 aaKnown RBP eCLIP11.85□□□□□ -0.51
CACNB3-215ENST00000550190 TNS2Q63HR2 1409 aa11.85□□□□□ -0.51
CACNB3-215ENST00000550190 GNAT3A8MTJ3 354 aa11.84□□□□□ -0.51
CACNB3-215ENST00000550190 CYP27B1O15528 508 aa11.84□□□□□ -0.51
CACNB3-215ENST00000550190 PHKG2P15735 406 aa11.84□□□□□ -0.51
CACNB3-215ENST00000550190 AKAP4Q5JQC9 854 aa11.84□□□□□ -0.51
CACNB3-215ENST00000550190 MPRIPQ6WCQ1 1025 aa11.84□□□□□ -0.51
CACNB3-215ENST00000550190 RTF1Q92541 710 aaKnown RBP11.84□□□□□ -0.51
CACNB3-215ENST00000550190 FAM182BQ5T319 152 aa11.83□□□□□ -0.52
CACNB3-215ENST00000550190 MARCH10Q8NA82 808 aaPredicted RBP11.83□□□□□ -0.52
CACNB3-215ENST00000550190 SCN11AQ9UI33 1791 aa11.82□□□□□ -0.52
CACNB3-215ENST00000550190 MAP3K5Q99683 1374 aa11.82□□□□□ -0.52
CACNB3-215ENST00000550190 PLEKHG2Q9H7P9 1386 aa11.82□□□□□ -0.52
CACNB3-215ENST00000550190 HSP90AB1P08238 724 aaKnown RBP11.82□□□□□ -0.52
CACNB3-215ENST00000550190 DCTN1Q14203 1278 aa11.82□□□□□ -0.52
CACNB3-215ENST00000550190 KRT27Q7Z3Y8 459 aa11.82□□□□□ -0.52
CACNB3-215ENST00000550190 RGS12O14924 1447 aa11.82□□□□□ -0.52
CACNB3-215ENST00000550190 LMOD3Q0VAK6 560 aa11.81□□□□□ -0.52
CACNB3-215ENST00000550190 MCM10Q7L590 875 aa11.81□□□□□ -0.52
CACNB3-215ENST00000550190 LGR6Q9HBX8 967 aa11.81□□□□□ -0.52
CACNB3-215ENST00000550190 RNMTO43148 476 aaKnown RBP11.8□□□□□ -0.52
CACNB3-215ENST00000550190 HTATSF1O43719 755 aaKnown RBP11.8□□□□□ -0.52
CACNB3-215ENST00000550190 IL17REQ8NFR9 667 aa11.8□□□□□ -0.52
CACNB3-215ENST00000550190 ACSBG1Q96GR2 724 aa11.8□□□□□ -0.52
CACNB3-215ENST00000550190 THUMPD2Q9BTF0 503 aaKnown RBP11.8□□□□□ -0.52
CACNB3-215ENST00000550190 TRIM35Q9UPQ4 493 aa11.8□□□□□ -0.52
CACNB3-215ENST00000550190 ITGB4P16144 1822 aa11.8□□□□□ -0.52
CACNB3-215ENST00000550190 DOT1LQ8TEK3 1739 aa11.8□□□□□ -0.52
CACNB3-215ENST00000550190 SYTL4Q96C24 671 aaPredicted RBP11.79□□□□□ -0.52
CACNB3-215ENST00000550190 DCAF5Q96JK2 942 aa11.79□□□□□ -0.52
CACNB3-215ENST00000550190 LAS1LQ9Y4W2 734 aaKnown RBP11.79□□□□□ -0.52
CACNB3-215ENST00000550190 TOGARAM1Q9Y4F4 1720 aa11.78□□□□□ -0.52
CACNB3-215ENST00000550190 CABP4P57796 275 aa11.78□□□□□ -0.52
CACNB3-215ENST00000550190 TEFQ10587 303 aa11.78□□□□□ -0.52
CACNB3-215ENST00000550190 NKX1-1Q15270 411 aaPredicted RBP11.78□□□□□ -0.52
CACNB3-215ENST00000550190 WWC1Q8IX03 1113 aa11.78□□□□□ -0.52
CACNB3-215ENST00000550190 NGEFQ8N5V2 710 aa11.78□□□□□ -0.52
CACNB3-215ENST00000550190 SBF2Q86WG5 1849 aa11.78□□□□□ -0.52
CACNB3-215ENST00000550190 KDM6AO15550 1401 aaPredicted RBP11.77□□□□□ -0.52
CACNB3-215ENST00000550190 CCDC27Q2M243 656 aa11.77□□□□□ -0.53
CACNB3-215ENST00000550190 ADAMTS7Q9UKP4 1686 aa11.76□□□□□ -0.53
CACNB3-215ENST00000550190 ERVV-2B6SEH9 535 aa11.76□□□□□ -0.53
CACNB3-215ENST00000550190 PRIM1P49642 420 aaKnown RBP11.76□□□□□ -0.53
CACNB3-215ENST00000550190 FAM196AQ6ZSG2 479 aa11.76□□□□□ -0.53
CACNB3-215ENST00000550190 NFATC2IPQ8NCF5 419 aa11.76□□□□□ -0.53
CACNB3-215ENST00000550190 TMOD3Q9NYL9 352 aa11.76□□□□□ -0.53
CACNB3-215ENST00000550190 SIPA1L3O60292 1781 aaPredicted RBP11.75□□□□□ -0.53
CACNB3-215ENST00000550190 CALD1Q05682 793 aaKnown RBP11.75□□□□□ -0.53
CACNB3-215ENST00000550190 NCBP3Q53F19 620 aaKnown RBP11.75□□□□□ -0.53
CACNB3-215ENST00000550190 SLC52A2Q9HAB3 445 aa11.75□□□□□ -0.53
CACNB3-215ENST00000550190 MIS18AQ9NYP9 233 aa11.75□□□□□ -0.53
CACNB3-215ENST00000550190 BTBD11A6QL63 1104 aa11.74□□□□□ -0.53
CACNB3-215ENST00000550190 KCNQ2O43526 872 aa11.74□□□□□ -0.53
CACNB3-215ENST00000550190 TAF7Q15545 349 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms