RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 PAPPAQ13219 1627 aa22.13■■□□□ 1.13
COX6A1-203ENST00000550009 KCNQ4P56696 695 aa22.11■■□□□ 1.13
COX6A1-203ENST00000550009 EIF4G2P78344 907 aaKnown RBP eCLIP22.1■■□□□ 1.13
COX6A1-203ENST00000550009 TOGARAM1Q9Y4F4 1720 aa22.1■■□□□ 1.13
COX6A1-203ENST00000550009 INSRP06213 1382 aa22.1■■□□□ 1.13
COX6A1-203ENST00000550009 LY75O60449 1722 aa22.09■■□□□ 1.13
COX6A1-203ENST00000550009 ITGB4P16144 1822 aa22.09■■□□□ 1.13
COX6A1-203ENST00000550009 PPM1GO15355 546 aaPredicted RBP22.09■■□□□ 1.13
COX6A1-203ENST00000550009 LRRC4BQ9NT99 713 aa22.09■■□□□ 1.13
COX6A1-203ENST00000550009 FLT4P35916 1363 aa22.09■■□□□ 1.13
COX6A1-203ENST00000550009 TNNT2P45379 298 aaPredicted RBP22.08■■□□□ 1.13
COX6A1-203ENST00000550009 NSD2O96028 1365 aa22.08■■□□□ 1.12
COX6A1-203ENST00000550009 ZCRB1Q8TBF4 217 aaKnown RBP22.07■■□□□ 1.12
COX6A1-203ENST00000550009 ZBTB7AO95365 584 aa22.06■■□□□ 1.12
COX6A1-203ENST00000550009 PRIM1P49642 420 aaKnown RBP22.06■■□□□ 1.12
COX6A1-203ENST00000550009 PANK3Q9H999 370 aa22.06■■□□□ 1.12
COX6A1-203ENST00000550009 PKD1L3Q7Z443 1732 aa22.06■■□□□ 1.12
COX6A1-203ENST00000550009 ZNF827Q17R98 1081 aa22.05■■□□□ 1.12
COX6A1-203ENST00000550009 SYTL4Q96C24 671 aaPredicted RBP22.05■■□□□ 1.12
COX6A1-203ENST00000550009 SLC15A2Q16348 729 aa22.04■■□□□ 1.12
COX6A1-203ENST00000550009 POLKQ9UBT6 870 aa22.03■■□□□ 1.12
COX6A1-203ENST00000550009 ATF5Q9Y2D1 282 aaPredicted RBP22.03■■□□□ 1.12
COX6A1-203ENST00000550009 SMG6Q86US8 1419 aaKnown RBP22.03■■□□□ 1.12
COX6A1-203ENST00000550009 CGNL1Q0VF96 1302 aa22.03■■□□□ 1.12
COX6A1-203ENST00000550009 STK32BQ9NY57 414 aa22.02■■□□□ 1.12
COX6A1-203ENST00000550009 SPON1Q9HCB6 807 aa22.01■■□□□ 1.11
COX6A1-203ENST00000550009 RAPGEF4Q8WZA2 1011 aa22■■□□□ 1.11
COX6A1-203ENST00000550009 TAF1LQ8IZX4 1826 aa22■■□□□ 1.11
COX6A1-203ENST00000550009 NCAPD2Q15021 1401 aa21.99■■□□□ 1.11
COX6A1-203ENST00000550009 CYP27B1O15528 508 aa21.99■■□□□ 1.11
COX6A1-203ENST00000550009 TATP17735 454 aaPredicted RBP21.99■■□□□ 1.11
COX6A1-203ENST00000550009 EYA1Q99502 592 aa21.99■■□□□ 1.11
COX6A1-203ENST00000550009 QSER1Q2KHR3 1735 aa21.99■■□□□ 1.11
COX6A1-203ENST00000550009 KIF24Q5T7B8 1368 aa21.99■■□□□ 1.11
COX6A1-203ENST00000550009 PTGER2P43116 358 aa21.98■■□□□ 1.11
COX6A1-203ENST00000550009 WASHC2AQ641Q2 1341 aa21.98■■□□□ 1.11
COX6A1-203ENST00000550009 EIF4A2Q14240 407 aaKnown RBP21.96■■□□□ 1.11
COX6A1-203ENST00000550009 AKT1S1Q96B36 256 aa21.95■■□□□ 1.1
COX6A1-203ENST00000550009 PPP1R1BQ9UD71 204 aaPredicted RBP21.95■■□□□ 1.1
COX6A1-203ENST00000550009 KIF7Q2M1P5 1343 aa21.94■■□□□ 1.1
COX6A1-203ENST00000550009 C5P01031 1676 aa21.94■■□□□ 1.1
COX6A1-203ENST00000550009 UTRNP46939 3433 aa21.93■■□□□ 1.1
COX6A1-203ENST00000550009 PCDH11XQ9BZA7 1347 aa21.92■■□□□ 1.1
COX6A1-203ENST00000550009 PCDH11YQ9BZA8 1340 aa21.92■■□□□ 1.1
COX6A1-203ENST00000550009 COL24A1Q17RW2 1714 aa21.92■■□□□ 1.1
COX6A1-203ENST00000550009 SGIP1Q9BQI5 828 aa21.91■■□□□ 1.1
COX6A1-203ENST00000550009 GOLGB1Q14789 3259 aaKnown RBP21.9■■□□□ 1.1
COX6A1-203ENST00000550009 PNPLA7Q6ZV29 1317 aa21.9■■□□□ 1.1
COX6A1-203ENST00000550009 MPRIPQ6WCQ1 1025 aa21.89■■□□□ 1.09
COX6A1-203ENST00000550009 SLC27A3Q5K4L6 730 aa21.88■■□□□ 1.09
COX6A1-203ENST00000550009 CCNL1Q9UK58 526 aaPredicted RBP21.88■■□□□ 1.09
COX6A1-203ENST00000550009 VIRMAQ69YN4 1812 aaKnown RBP21.87■■□□□ 1.09
COX6A1-203ENST00000550009 SMIM5Q71RC9 77 aa21.87■■□□□ 1.09
COX6A1-203ENST00000550009 MTFR1LQ9H019 292 aa21.87■■□□□ 1.09
COX6A1-203ENST00000550009 AMER1Q5JTC6 1135 aaPredicted RBP21.86■■□□□ 1.09
COX6A1-203ENST00000550009 MORC1Q86VD1 984 aa21.86■■□□□ 1.09
COX6A1-203ENST00000550009 AEBP1Q8IUX7 1158 aa21.86■■□□□ 1.09
COX6A1-203ENST00000550009 AMIGO3Q86WK7 504 aa21.85■■□□□ 1.09
COX6A1-203ENST00000550009 PIGBQ92521 554 aa21.85■■□□□ 1.09
COX6A1-203ENST00000550009 FHDC1Q9C0D6 1143 aaPredicted RBP21.85■■□□□ 1.09
COX6A1-203ENST00000550009 UBR3Q6ZT12 1888 aa21.85■■□□□ 1.09
COX6A1-203ENST00000550009 IGSF1Q8N6C5 1336 aa21.84■■□□□ 1.09
COX6A1-203ENST00000550009 PALLDQ8WX93 1383 aa21.84■■□□□ 1.09
COX6A1-203ENST00000550009 C4BP0C0L5 1744 aa21.83■■□□□ 1.09
COX6A1-203ENST00000550009 NKX1-1Q15270 411 aaPredicted RBP21.83■■□□□ 1.09
COX6A1-203ENST00000550009 TFCP2L1Q9NZI6 479 aa21.83■■□□□ 1.09
COX6A1-203ENST00000550009 PHKG2P15735 406 aa21.82■■□□□ 1.08
COX6A1-203ENST00000550009 CNGB1Q14028 1251 aaPredicted RBP21.82■■□□□ 1.08
COX6A1-203ENST00000550009 SPG7Q9UQ90 795 aa21.82■■□□□ 1.08
COX6A1-203ENST00000550009 KNSTRNQ9Y448 316 aa21.82■■□□□ 1.08
COX6A1-203ENST00000550009 COL23A1Q86Y22 540 aaPredicted RBP21.81■■□□□ 1.08
COX6A1-203ENST00000550009 PER1O15534 1290 aaPredicted RBP21.8■■□□□ 1.08
COX6A1-203ENST00000550009 SYT17Q9BSW7 474 aa21.8■■□□□ 1.08
COX6A1-203ENST00000550009 ASAP1Q9ULH1 1129 aa21.8■■□□□ 1.08
COX6A1-203ENST00000550009 CC2D1BQ5T0F9 858 aaKnown RBP21.79■■□□□ 1.08
COX6A1-203ENST00000550009 MSL1Q68DK7 614 aa21.78■■□□□ 1.08
COX6A1-203ENST00000550009 ARXQ96QS3 562 aa21.78■■□□□ 1.08
COX6A1-203ENST00000550009 IL13P35225 146 aa21.77■■□□□ 1.08
COX6A1-203ENST00000550009 KDM6AO15550 1401 aaPredicted RBP21.77■■□□□ 1.08
COX6A1-203ENST00000550009 SCN11AQ9UI33 1791 aa21.76■■□□□ 1.07
COX6A1-203ENST00000550009 IFNL2Q8IZJ0 200 aa21.76■■□□□ 1.07
COX6A1-203ENST00000550009 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.76■■□□□ 1.07
COX6A1-203ENST00000550009 MSH5O43196 834 aa21.75■■□□□ 1.07
COX6A1-203ENST00000550009 ITPK1Q13572 414 aa21.75■■□□□ 1.07
COX6A1-203ENST00000550009 LINC00116Q8NCU8 138 aa21.75■■□□□ 1.07
COX6A1-203ENST00000550009 MYH14Q7Z406 1995 aaKnown RBP21.75■■□□□ 1.07
COX6A1-203ENST00000550009 MTHFSP49914 203 aa21.74■■□□□ 1.07
COX6A1-203ENST00000550009 SULT6B1Q6IMI4 303 aa21.74■■□□□ 1.07
COX6A1-203ENST00000550009 KLHL34Q8N239 644 aa21.74■■□□□ 1.07
COX6A1-203ENST00000550009 ATG3Q9NT62 314 aa21.74■■□□□ 1.07
COX6A1-203ENST00000550009 TMOD3Q9NYL9 352 aa21.74■■□□□ 1.07
COX6A1-203ENST00000550009 CHD4Q14839 1912 aa21.74■■□□□ 1.07
COX6A1-203ENST00000550009 ZNF530Q6P9A1 599 aaPredicted RBP21.73■■□□□ 1.07
COX6A1-203ENST00000550009 SLC4A9Q96Q91 983 aa21.73■■□□□ 1.07
COX6A1-203ENST00000550009 COL5A3P25940 1745 aaPredicted RBP21.72■■□□□ 1.07
COX6A1-203ENST00000550009 LOC102724428A0A0B4J2F2 783 aa21.71■■□□□ 1.07
COX6A1-203ENST00000550009 SIK1P57059 783 aa21.71■■□□□ 1.07
COX6A1-203ENST00000550009 NLGN2Q8NFZ4 835 aa21.71■■□□□ 1.07
COX6A1-203ENST00000550009 PHF14O94880 888 aa21.7■■□□□ 1.06
COX6A1-203ENST00000550009 HMOX1P09601 288 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms