RNA–Protein interactions for RNA: ENST00000549947.1

CNOT2-221, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 489 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-221ENST00000549947 CALR3Q96L12 384 aaKnown RBP12.83□□□□□ -0.36
CNOT2-221ENST00000549947 SPINT1O43278 529 aa12.82□□□□□ -0.36
CNOT2-221ENST00000549947 UPP2O95045 317 aa12.82□□□□□ -0.36
CNOT2-221ENST00000549947 PTGIRP43119 386 aa12.82□□□□□ -0.36
CNOT2-221ENST00000549947 SENP2Q9HC62 589 aa12.82□□□□□ -0.36
CNOT2-221ENST00000549947 MAP7D1Q3KQU3 841 aa12.81□□□□□ -0.36
CNOT2-221ENST00000549947 DEPDC4Q8N2C3 294 aa12.81□□□□□ -0.36
CNOT2-221ENST00000549947 NFATC2IPQ8NCF5 419 aa12.81□□□□□ -0.36
CNOT2-221ENST00000549947 SOBPA7XYQ1 873 aa12.8□□□□□ -0.36
CNOT2-221ENST00000549947 USP17L5A8MUK1 530 aa12.8□□□□□ -0.36
CNOT2-221ENST00000549947 ATP5J2-PTCD1G3V325 749 aa12.8□□□□□ -0.36
CNOT2-221ENST00000549947 INSM2Q96T92 566 aaPredicted RBP12.8□□□□□ -0.36
CNOT2-221ENST00000549947 STAU1O95793 577 aaKnown RBP12.79□□□□□ -0.36
CNOT2-221ENST00000549947 CTSOP43234 321 aaPredicted RBP12.79□□□□□ -0.36
CNOT2-221ENST00000549947 KIFC2Q96AC6 838 aa12.79□□□□□ -0.36
CNOT2-221ENST00000549947 SOS2Q07890 1332 aaPredicted RBP12.79□□□□□ -0.36
CNOT2-221ENST00000549947 MYCP01106 439 aaPredicted RBP12.78□□□□□ -0.36
CNOT2-221ENST00000549947 USP4Q13107 963 aa12.78□□□□□ -0.36
CNOT2-221ENST00000549947 NCOA4Q13772 614 aa12.78□□□□□ -0.36
CNOT2-221ENST00000549947 CYP2U1Q7Z449 544 aa12.78□□□□□ -0.36
CNOT2-221ENST00000549947 ATP9BO43861 1147 aa12.77□□□□□ -0.37
CNOT2-221ENST00000549947 A0A1W2PRU2 124 aa12.76□□□□□ -0.37
CNOT2-221ENST00000549947 TRIM52Q96A61 297 aa12.76□□□□□ -0.37
CNOT2-221ENST00000549947 ARHGEF10LQ9HCE6 1279 aa12.76□□□□□ -0.37
CNOT2-221ENST00000549947 RAB6BQ9NRW1 208 aa12.76□□□□□ -0.37
CNOT2-221ENST00000549947 TFIP11Q9UBB9 837 aaKnown RBP12.76□□□□□ -0.37
CNOT2-221ENST00000549947 DNMT3LQ9UJW3 386 aa12.76□□□□□ -0.37
CNOT2-221ENST00000549947 USP17L3A6NCW0 530 aa12.75□□□□□ -0.37
CNOT2-221ENST00000549947 USP17L4A6NCW7 530 aa12.75□□□□□ -0.37
CNOT2-221ENST00000549947 ARID3CA6NKF2 412 aa12.75□□□□□ -0.37
CNOT2-221ENST00000549947 FOXD4L5Q5VV16 416 aaPredicted RBP12.75□□□□□ -0.37
CNOT2-221ENST00000549947 USP17L2Q6R6M4 530 aa12.75□□□□□ -0.37
CNOT2-221ENST00000549947 USP17L1Q7RTZ2 530 aa12.75□□□□□ -0.37
CNOT2-221ENST00000549947 PALM3A6NDB9 673 aaPredicted RBP12.74□□□□□ -0.37
CNOT2-221ENST00000549947 TTLL8A6PVC2 850 aa12.74□□□□□ -0.37
CNOT2-221ENST00000549947 EML3Q32P44 896 aa12.74□□□□□ -0.37
CNOT2-221ENST00000549947 PPP1R12CQ9BZL4 782 aa12.74□□□□□ -0.37
CNOT2-221ENST00000549947 ESF1Q9H501 851 aaKnown RBP12.74□□□□□ -0.37
CNOT2-221ENST00000549947 POLMQ9NP87 494 aaPredicted RBP12.74□□□□□ -0.37
CNOT2-221ENST00000549947 TIMELESSQ9UNS1 1208 aa12.74□□□□□ -0.37
CNOT2-221ENST00000549947 MAFBQ9Y5Q3 323 aaPredicted RBP12.74□□□□□ -0.37
CNOT2-221ENST00000549947 PLEKHM2Q8IWE5 1019 aa12.73□□□□□ -0.37
CNOT2-221ENST00000549947 FIGNL2A6NMB9 653 aa12.72□□□□□ -0.37
CNOT2-221ENST00000549947 MEN1O00255 615 aa12.72□□□□□ -0.37
CNOT2-221ENST00000549947 RNF217Q8TC41 542 aa12.72□□□□□ -0.37
CNOT2-221ENST00000549947 PCDHGA11Q9Y5H2 935 aa12.72□□□□□ -0.37
CNOT2-221ENST00000549947 GNRH1P01148 92 aa12.71□□□□□ -0.37
CNOT2-221ENST00000549947 IL2RAP01589 272 aa12.71□□□□□ -0.37
CNOT2-221ENST00000549947 SIRT1Q96EB6 747 aa12.71□□□□□ -0.37
CNOT2-221ENST00000549947 ETNK1Q9HBU6 452 aa12.71□□□□□ -0.37
CNOT2-221ENST00000549947 CLN3Q13286 438 aa12.7□□□□□ -0.38
CNOT2-221ENST00000549947 NOD1Q9Y239 953 aa12.7□□□□□ -0.38
CNOT2-221ENST00000549947 LZTS3O60299 673 aaPredicted RBP12.69□□□□□ -0.38
CNOT2-221ENST00000549947 MAN1A2O60476 641 aa12.69□□□□□ -0.38
CNOT2-221ENST00000549947 SCNN1DP51172 638 aa12.69□□□□□ -0.38
CNOT2-221ENST00000549947 CFAP70Q5T0N1 1121 aa12.69□□□□□ -0.38
CNOT2-221ENST00000549947 C1orf115Q9H7X2 142 aa12.69□□□□□ -0.38
CNOT2-221ENST00000549947 GTF2IP78347 998 aa12.68□□□□□ -0.38
CNOT2-221ENST00000549947 HRH3Q9Y5N1 445 aa12.68□□□□□ -0.38
CNOT2-221ENST00000549947 RNF144AP50876 292 aaPredicted RBP12.67□□□□□ -0.38
CNOT2-221ENST00000549947 CNKSR1Q969H4 720 aa12.67□□□□□ -0.38
CNOT2-221ENST00000549947 KIAA1024Q9UPX6 916 aa12.67□□□□□ -0.38
CNOT2-221ENST00000549947 CLDN10P78369 228 aa12.66□□□□□ -0.38
CNOT2-221ENST00000549947 MKRN1Q9UHC7 482 aaKnown RBP12.66□□□□□ -0.38
CNOT2-221ENST00000549947 TMEM229AB2RXF0 380 aa12.65□□□□□ -0.38
CNOT2-221ENST00000549947 LMOD1P29536 600 aaPredicted RBP12.65□□□□□ -0.38
CNOT2-221ENST00000549947 GDF10P55107 478 aa12.65□□□□□ -0.38
CNOT2-221ENST00000549947 XAGE2Q96GT9 111 aa12.65□□□□□ -0.38
CNOT2-221ENST00000549947 ESYT1Q9BSJ8 1104 aa12.65□□□□□ -0.38
CNOT2-221ENST00000549947 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.64□□□□□ -0.39
CNOT2-221ENST00000549947 ZNF775Q96BV0 537 aaPredicted RBP12.64□□□□□ -0.39
CNOT2-221ENST00000549947 NLRP3Q96P20 1036 aa12.64□□□□□ -0.39
CNOT2-221ENST00000549947 ZBTB7BO15156 539 aaPredicted RBP12.63□□□□□ -0.39
CNOT2-221ENST00000549947 INHAP05111 366 aa12.62□□□□□ -0.39
CNOT2-221ENST00000549947 GPC1P35052 558 aa12.62□□□□□ -0.39
CNOT2-221ENST00000549947 CENPCQ03188 943 aa12.62□□□□□ -0.39
CNOT2-221ENST00000549947 KANK4Q5T7N3 995 aaPredicted RBP12.62□□□□□ -0.39
CNOT2-221ENST00000549947 PRICKLE2Q7Z3G6 844 aa12.62□□□□□ -0.39
CNOT2-221ENST00000549947 FHDC1Q9C0D6 1143 aaPredicted RBP12.62□□□□□ -0.39
CNOT2-221ENST00000549947 GRIP2Q9C0E4 1043 aa12.62□□□□□ -0.39
CNOT2-221ENST00000549947 ESCO1Q5FWF5 840 aa12.61□□□□□ -0.39
CNOT2-221ENST00000549947 OGFOD1Q8N543 542 aa12.61□□□□□ -0.39
CNOT2-221ENST00000549947 WASLO00401 505 aaPredicted RBP12.6□□□□□ -0.39
CNOT2-221ENST00000549947 RFX1P22670 979 aa12.6□□□□□ -0.39
CNOT2-221ENST00000549947 PSME1Q06323 249 aa12.6□□□□□ -0.39
CNOT2-221ENST00000549947 LYSMD3Q7Z3D4 306 aa12.6□□□□□ -0.39
CNOT2-221ENST00000549947 TRIM50Q86XT4 487 aa12.6□□□□□ -0.39
CNOT2-221ENST00000549947 SERTAD1Q9UHV2 236 aa12.6□□□□□ -0.39
CNOT2-221ENST00000549947 RHOQP17081 205 aa12.59□□□□□ -0.39
CNOT2-221ENST00000549947 VEGFBP49765 207 aa12.59□□□□□ -0.39
CNOT2-221ENST00000549947 PTSQ03393 145 aa12.59□□□□□ -0.39
CNOT2-221ENST00000549947 SLC27A3Q5K4L6 730 aa12.59□□□□□ -0.39
CNOT2-221ENST00000549947 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.59□□□□□ -0.39
CNOT2-221ENST00000549947 DNAAF2Q9NVR5 837 aaKnown RBP12.59□□□□□ -0.39
CNOT2-221ENST00000549947 DKK1O94907 266 aa12.58□□□□□ -0.4
CNOT2-221ENST00000549947 TPCN2Q8NHX9 752 aa12.58□□□□□ -0.4
CNOT2-221ENST00000549947 ZNF594Q96JF6 807 aaPredicted RBP12.58□□□□□ -0.4
CNOT2-221ENST00000549947 ZNF358Q9NW07 568 aa12.58□□□□□ -0.4
CNOT2-221ENST00000549947 SENP3-EIF4A1A0A087X0R7 540 aa12.57□□□□□ -0.4
CNOT2-221ENST00000549947 ATP1A2P50993 1020 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms