RNA–Protein interactions for RNA: ENST00000549770.1

NPAS3-207, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-207ENST00000549770 NKX1-1Q15270 411 aaPredicted RBP9□□□□□ -0.97
NPAS3-207ENST00000549770 GJD4Q96KN9 370 aaPredicted RBP9□□□□□ -0.97
NPAS3-207ENST00000549770 PRDM11Q9NQV5 511 aa9□□□□□ -0.97
NPAS3-207ENST00000549770 PIK3C2AO00443 1686 aa9□□□□□ -0.97
NPAS3-207ENST00000549770 NRKQ7Z2Y5 1582 aa8.99□□□□□ -0.97
NPAS3-207ENST00000549770 PPP1R37O75864 691 aa8.99□□□□□ -0.97
NPAS3-207ENST00000549770 TMC1Q8TDI8 760 aa8.99□□□□□ -0.97
NPAS3-207ENST00000549770 UPF1Q92900 1129 aaKnown RBP eCLIP8.99□□□□□ -0.97
NPAS3-207ENST00000549770 ATAD2Q6PL18 1390 aa8.99□□□□□ -0.97
NPAS3-207ENST00000549770 SBNO2Q9Y2G9 1366 aa8.99□□□□□ -0.97
NPAS3-207ENST00000549770 VPS72Q15906 364 aa8.98□□□□□ -0.97
NPAS3-207ENST00000549770 TESK2Q96S53 571 aa8.98□□□□□ -0.97
NPAS3-207ENST00000549770 BRWD3Q6RI45 1802 aa8.98□□□□□ -0.97
NPAS3-207ENST00000549770 KTN1Q86UP2 1357 aaKnown RBP8.98□□□□□ -0.97
NPAS3-207ENST00000549770 USP47Q96K76 1375 aa8.98□□□□□ -0.97
NPAS3-207ENST00000549770 MON2Q7Z3U7 1717 aa8.97□□□□□ -0.97
NPAS3-207ENST00000549770 A0A0G2JS52 829 aa8.97□□□□□ -0.97
NPAS3-207ENST00000549770 TMEM92Q6UXU6 159 aa8.97□□□□□ -0.97
NPAS3-207ENST00000549770 NLRP13Q86W25 1043 aa8.97□□□□□ -0.97
NPAS3-207ENST00000549770 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.97□□□□□ -0.97
NPAS3-207ENST00000549770 SLC12A5Q9H2X9 1139 aa8.97□□□□□ -0.97
NPAS3-207ENST00000549770 STRN4Q9NRL3 753 aa8.97□□□□□ -0.97
NPAS3-207ENST00000549770 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.97□□□□□ -0.97
NPAS3-207ENST00000549770 USP19O94966 1318 aa8.97□□□□□ -0.97
NPAS3-207ENST00000549770 TTC21BQ7Z4L5 1316 aa8.97□□□□□ -0.97
NPAS3-207ENST00000549770 CLSPNQ9HAW4 1339 aa8.97□□□□□ -0.97
NPAS3-207ENST00000549770 CPSF1Q10570 1443 aaKnown RBP8.97□□□□□ -0.97
NPAS3-207ENST00000549770 SSH2Q76I76 1423 aa8.97□□□□□ -0.97
NPAS3-207ENST00000549770 GCP02774 474 aa8.96□□□□□ -0.98
NPAS3-207ENST00000549770 FAM98CQ17RN3 349 aaKnown RBP8.96□□□□□ -0.98
NPAS3-207ENST00000549770 SEPT12Q8IYM1 358 aa8.96□□□□□ -0.98
NPAS3-207ENST00000549770 CD163L1Q9NR16 1453 aa8.96□□□□□ -0.98
NPAS3-207ENST00000549770 RYDENQ9NUL5 291 aaKnown RBP8.95□□□□□ -0.98
NPAS3-207ENST00000549770 USP35Q9P2H5 1018 aa8.95□□□□□ -0.98
NPAS3-207ENST00000549770 A0A1W2PP64 1363 aa8.95□□□□□ -0.98
NPAS3-207ENST00000549770 BRD4O60885 1362 aaPredicted RBP8.95□□□□□ -0.98
NPAS3-207ENST00000549770 SLIT3O75094 1523 aa8.95□□□□□ -0.98
NPAS3-207ENST00000549770 LMO7Q8WWI1 1683 aa8.94□□□□□ -0.98
NPAS3-207ENST00000549770 CAMTA1Q9Y6Y1 1673 aa8.94□□□□□ -0.98
NPAS3-207ENST00000549770 HDGFL2Q7Z4V5 671 aaPredicted RBP8.94□□□□□ -0.98
NPAS3-207ENST00000549770 NME9Q86XW9 330 aa8.94□□□□□ -0.98
NPAS3-207ENST00000549770 TIMELESSQ9UNS1 1208 aa8.94□□□□□ -0.98
NPAS3-207ENST00000549770 EVA1CP58658 441 aa8.93□□□□□ -0.98
NPAS3-207ENST00000549770 LARP1Q6PKG0 1096 aaKnown RBP8.93□□□□□ -0.98
NPAS3-207ENST00000549770 MARVELD3Q96A59 401 aa8.93□□□□□ -0.98
NPAS3-207ENST00000549770 TERF2IPQ9NYB0 399 aa8.93□□□□□ -0.98
NPAS3-207ENST00000549770 SPATA31A5Q5VU36 1347 aa8.93□□□□□ -0.98
NPAS3-207ENST00000549770 SPATA31A7Q8IWB4 1347 aa8.93□□□□□ -0.98
NPAS3-207ENST00000549770 TTC21AQ8NDW8 1320 aa8.93□□□□□ -0.98
NPAS3-207ENST00000549770 CPDO75976 1380 aa8.93□□□□□ -0.98
NPAS3-207ENST00000549770 RGPD5Q99666 1765 aa8.93□□□□□ -0.98
NPAS3-207ENST00000549770 SRCAPQ6ZRS2 3230 aa8.92□□□□□ -0.98
NPAS3-207ENST00000549770 EDC4Q6P2E9 1401 aaKnown RBP8.92□□□□□ -0.98
NPAS3-207ENST00000549770 SPATA31A1Q5TZJ5 1347 aa8.92□□□□□ -0.98
NPAS3-207ENST00000549770 TMF1P82094 1093 aa8.92□□□□□ -0.98
NPAS3-207ENST00000549770 MMRN1Q13201 1228 aa8.92□□□□□ -0.98
NPAS3-207ENST00000549770 FAM182BQ5T319 152 aa8.92□□□□□ -0.98
NPAS3-207ENST00000549770 SPNS2Q8IVW8 549 aa8.92□□□□□ -0.98
NPAS3-207ENST00000549770 BBXQ8WY36 941 aaPredicted RBP8.92□□□□□ -0.98
NPAS3-207ENST00000549770 NFAT5O94916 1531 aa8.91□□□□□ -0.98
NPAS3-207ENST00000549770 COL5A2P05997 1499 aaPredicted RBP8.91□□□□□ -0.98
NPAS3-207ENST00000549770 KRT27Q7Z3Y8 459 aa8.91□□□□□ -0.98
NPAS3-207ENST00000549770 POLR3GLQ9BT43 218 aa8.91□□□□□ -0.98
NPAS3-207ENST00000549770 COL18A1P39060 1754 aa8.91□□□□□ -0.98
NPAS3-207ENST00000549770 THSD7AQ9UPZ6 1657 aa8.91□□□□□ -0.98
NPAS3-207ENST00000549770 GTPBP6O43824 516 aaPredicted RBP8.9□□□□□ -0.98
NPAS3-207ENST00000549770 ONECUT3O60422 494 aaPredicted RBP8.9□□□□□ -0.98
NPAS3-207ENST00000549770 PLCB2Q00722 1185 aa8.9□□□□□ -0.98
NPAS3-207ENST00000549770 PUS7Q96PZ0 661 aaKnown RBP8.9□□□□□ -0.98
NPAS3-207ENST00000549770 AXIN2Q9Y2T1 843 aa8.9□□□□□ -0.98
NPAS3-207ENST00000549770 LTN1O94822 1766 aa8.9□□□□□ -0.98
NPAS3-207ENST00000549770 MYOM1P52179 1685 aa8.9□□□□□ -0.98
NPAS3-207ENST00000549770 USP54Q70EL1 1684 aa8.9□□□□□ -0.98
NPAS3-207ENST00000549770 AATKQ6ZMQ8 1374 aa8.89□□□□□ -0.99
NPAS3-207ENST00000549770 C2orf72A6NCS6 295 aa8.89□□□□□ -0.99
NPAS3-207ENST00000549770 HSPA5P11021 654 aaKnown RBP8.89□□□□□ -0.99
NPAS3-207ENST00000549770 HOXB3P14651 431 aaPredicted RBP8.89□□□□□ -0.99
NPAS3-207ENST00000549770 DOK7Q18PE1 504 aa8.89□□□□□ -0.99
NPAS3-207ENST00000549770 ARHGEF25Q86VW2 580 aa8.89□□□□□ -0.99
NPAS3-207ENST00000549770 ZNF710Q8N1W2 664 aa8.89□□□□□ -0.99
NPAS3-207ENST00000549770 KCNH5Q8NCM2 988 aa8.89□□□□□ -0.99
NPAS3-207ENST00000549770 TMC2Q8TDI7 906 aa8.89□□□□□ -0.99
NPAS3-207ENST00000549770 USP31Q70CQ4 1352 aa8.88□□□□□ -0.99
NPAS3-207ENST00000549770 NINLQ9Y2I6 1382 aa8.88□□□□□ -0.99
NPAS3-207ENST00000549770 CSB-PGBD3P0DP91 1061 aa8.88□□□□□ -0.99
NPAS3-207ENST00000549770 FBLN1P23142 703 aa8.88□□□□□ -0.99
NPAS3-207ENST00000549770 TOM1L2Q6ZVM7 507 aa8.88□□□□□ -0.99
NPAS3-207ENST00000549770 TCP11L2Q8N4U5 519 aa8.88□□□□□ -0.99
NPAS3-207ENST00000549770 OVOS2A0A0J9YW53 1432 aa8.88□□□□□ -0.99
NPAS3-207ENST00000549770 CRB1P82279 1406 aa8.88□□□□□ -0.99
NPAS3-207ENST00000549770 OVOS2Q6IE36 1432 aa8.88□□□□□ -0.99
NPAS3-207ENST00000549770 ANKRD36BQ8N2N9 1353 aa8.87□□□□□ -0.99
NPAS3-207ENST00000549770 EIF4G2P78344 907 aaKnown RBP eCLIP8.87□□□□□ -0.99
NPAS3-207ENST00000549770 CDCA8Q53HL2 280 aa8.87□□□□□ -0.99
NPAS3-207ENST00000549770 GGNBP2Q9H3C7 697 aa8.87□□□□□ -0.99
NPAS3-207ENST00000549770 KIF20BQ96Q89 1820 aa8.87□□□□□ -0.99
NPAS3-207ENST00000549770 WDR17Q8IZU2 1322 aa8.86□□□□□ -0.99
NPAS3-207ENST00000549770 KIF3CO14782 793 aa8.86□□□□□ -0.99
NPAS3-207ENST00000549770 RIMBP2O15034 1052 aa8.86□□□□□ -0.99
NPAS3-207ENST00000549770 DEFB132Q7Z7B7 95 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms