RNA–Protein interactions for RNA: ENST00000549421.1

TSPAN8-204, Transcript of tetraspanin 8, humanhuman

TSL 3

Gene TSPAN8, Length 246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-204ENST00000549421 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.59□□□□□ -1.35
TSPAN8-204ENST00000549421 MAP4K5Q9Y4K4 846 aa6.59□□□□□ -1.35
TSPAN8-204ENST00000549421 PCDHGA11Q9Y5H2 935 aa6.59□□□□□ -1.35
TSPAN8-204ENST00000549421 BACH1O14867 736 aa6.58□□□□□ -1.36
TSPAN8-204ENST00000549421 C21orf2O43822 256 aa6.58□□□□□ -1.36
TSPAN8-204ENST00000549421 TLL1O43897 1013 aa6.58□□□□□ -1.36
TSPAN8-204ENST00000549421 PRMT3O60678 531 aa6.58□□□□□ -1.36
TSPAN8-204ENST00000549421 ICMTO60725 284 aa6.58□□□□□ -1.36
TSPAN8-204ENST00000549421 ZSCAN29Q8IWY8 852 aaPredicted RBP6.58□□□□□ -1.36
TSPAN8-204ENST00000549421 GAS2L2Q8NHY3 880 aa6.58□□□□□ -1.36
TSPAN8-204ENST00000549421 PCDHB11Q9Y5F2 797 aa6.58□□□□□ -1.36
TSPAN8-204ENST00000549421 ZBTB24O43167 697 aaPredicted RBP6.57□□□□□ -1.36
TSPAN8-204ENST00000549421 FOXO3O43524 673 aa6.57□□□□□ -1.36
TSPAN8-204ENST00000549421 VARSP26640 1264 aaKnown RBP6.57□□□□□ -1.36
TSPAN8-204ENST00000549421 FGD1P98174 961 aa6.57□□□□□ -1.36
TSPAN8-204ENST00000549421 HINFPQ9BQA5 517 aa6.57□□□□□ -1.36
TSPAN8-204ENST00000549421 KIAA1024Q9UPX6 916 aa6.57□□□□□ -1.36
TSPAN8-204ENST00000549421 H3BRB1 525 aa6.56□□□□□ -1.36
TSPAN8-204ENST00000549421 WASLO00401 505 aaPredicted RBP6.56□□□□□ -1.36
TSPAN8-204ENST00000549421 ABL1P00519 1130 aa6.56□□□□□ -1.36
TSPAN8-204ENST00000549421 IGFBP4P22692 258 aa6.56□□□□□ -1.36
TSPAN8-204ENST00000549421 VAMP1P23763 118 aa6.56□□□□□ -1.36
TSPAN8-204ENST00000549421 WEE1P30291 646 aa6.56□□□□□ -1.36
TSPAN8-204ENST00000549421 WNT7BP56706 349 aa6.56□□□□□ -1.36
TSPAN8-204ENST00000549421 FKBP4Q02790 459 aaKnown RBP eCLIP6.56□□□□□ -1.36
TSPAN8-204ENST00000549421 TJAP1Q5JTD0 557 aa6.56□□□□□ -1.36
TSPAN8-204ENST00000549421 FOXJ1Q92949 421 aa6.56□□□□□ -1.36
TSPAN8-204ENST00000549421 TUT1Q9H6E5 874 aaKnown RBP6.56□□□□□ -1.36
TSPAN8-204ENST00000549421 DCTN4Q9UJW0 460 aa6.56□□□□□ -1.36
TSPAN8-204ENST00000549421 FCF1Q9Y324 198 aaKnown RBP6.56□□□□□ -1.36
TSPAN8-204ENST00000549421 ANKRD33BA6NCL7 494 aa6.55□□□□□ -1.36
TSPAN8-204ENST00000549421 SFI1A8K8P3 1242 aa6.55□□□□□ -1.36
TSPAN8-204ENST00000549421 ZNF16P17020 682 aaPredicted RBP6.55□□□□□ -1.36
TSPAN8-204ENST00000549421 GGCXP38435 758 aa6.55□□□□□ -1.36
TSPAN8-204ENST00000549421 DHX9Q08211 1270 aaKnown RBP6.55□□□□□ -1.36
TSPAN8-204ENST00000549421 TSGA10IPQ3SY00 556 aa6.55□□□□□ -1.36
TSPAN8-204ENST00000549421 LINC01559Q495D7 138 aa6.55□□□□□ -1.36
TSPAN8-204ENST00000549421 KCTD12Q96CX2 325 aaKnown RBP6.55□□□□□ -1.36
TSPAN8-204ENST00000549421 MRRFQ96E11 262 aaKnown RBP6.55□□□□□ -1.36
TSPAN8-204ENST00000549421 ASB16Q96NS5 453 aa6.55□□□□□ -1.36
TSPAN8-204ENST00000549421 KCTD15Q96SI1 283 aaPredicted RBP6.55□□□□□ -1.36
TSPAN8-204ENST00000549421 NPAS4Q8IUM7 802 aa6.54□□□□□ -1.36
TSPAN8-204ENST00000549421 PRIMPOLQ96LW4 560 aa6.54□□□□□ -1.36
TSPAN8-204ENST00000549421 FAM13AO94988 1023 aa6.53□□□□□ -1.36
TSPAN8-204ENST00000549421 SH3BP2P78314 561 aa6.53□□□□□ -1.36
TSPAN8-204ENST00000549421 C4orf48Q5BLP8 95 aa6.53□□□□□ -1.36
TSPAN8-204ENST00000549421 CC2D2BQ6DHV5 1058 aa6.53□□□□□ -1.36
TSPAN8-204ENST00000549421 GTF3C2Q8WUA4 911 aaPredicted RBP6.53□□□□□ -1.36
TSPAN8-204ENST00000549421 VTI1AQ96AJ9 217 aa6.53□□□□□ -1.36
TSPAN8-204ENST00000549421 IGSF5Q9NSI5 407 aa6.53□□□□□ -1.36
TSPAN8-204ENST00000549421 UNCXA6NJT0 531 aa6.52□□□□□ -1.37
TSPAN8-204ENST00000549421 S1PR4O95977 384 aa6.52□□□□□ -1.37
TSPAN8-204ENST00000549421 MAPK1P28482 360 aa6.52□□□□□ -1.37
TSPAN8-204ENST00000549421 ERVK-9P63128 1117 aa6.52□□□□□ -1.37
TSPAN8-204ENST00000549421 ESCO1Q5FWF5 840 aa6.52□□□□□ -1.37
TSPAN8-204ENST00000549421 VASH1Q7L8A9 365 aaPredicted RBP6.52□□□□□ -1.37
TSPAN8-204ENST00000549421 RGL4Q8IZJ4 473 aa6.52□□□□□ -1.37
TSPAN8-204ENST00000549421 MPNDQ8N594 471 aa6.52□□□□□ -1.37
TSPAN8-204ENST00000549421 HELQQ8TDG4 1101 aa6.52□□□□□ -1.37
TSPAN8-204ENST00000549421 GIPC2Q8TF65 315 aa6.52□□□□□ -1.37
TSPAN8-204ENST00000549421 CITED4Q96RK1 184 aa6.52□□□□□ -1.37
TSPAN8-204ENST00000549421 NPR3P17342 541 aa6.51□□□□□ -1.37
TSPAN8-204ENST00000549421 RPIAP49247 311 aa6.51□□□□□ -1.37
TSPAN8-204ENST00000549421 ZNF211Q13398 564 aaPredicted RBP6.51□□□□□ -1.37
TSPAN8-204ENST00000549421 ALKBH2Q6NS38 261 aa6.51□□□□□ -1.37
TSPAN8-204ENST00000549421 CYP2U1Q7Z449 544 aa6.51□□□□□ -1.37
TSPAN8-204ENST00000549421 STAG2Q8N3U4 1231 aa6.51□□□□□ -1.37
TSPAN8-204ENST00000549421 ZNF358Q9NW07 568 aa6.51□□□□□ -1.37
TSPAN8-204ENST00000549421 SHROOM4Q9ULL8 1493 aa6.5□□□□□ -1.37
TSPAN8-204ENST00000549421 NDUFB5O43674 189 aa6.5□□□□□ -1.37
TSPAN8-204ENST00000549421 TRIM32Q13049 653 aa6.5□□□□□ -1.37
TSPAN8-204ENST00000549421 FKBP5Q13451 457 aaPredicted RBP6.5□□□□□ -1.37
TSPAN8-204ENST00000549421 INTS6LQ5JSJ4 861 aaKnown RBP6.5□□□□□ -1.37
TSPAN8-204ENST00000549421 ANKLE1Q8NAG6 615 aa6.5□□□□□ -1.37
TSPAN8-204ENST00000549421 TSEN2Q8NCE0 465 aaKnown RBP6.5□□□□□ -1.37
TSPAN8-204ENST00000549421 ZNF516Q92618 1163 aa6.5□□□□□ -1.37
TSPAN8-204ENST00000549421 CHMP3Q9Y3E7 222 aa6.5□□□□□ -1.37
TSPAN8-204ENST00000549421 TCF3P15923 654 aa6.49□□□□□ -1.37
TSPAN8-204ENST00000549421 CDK15Q96Q40 435 aa6.49□□□□□ -1.37
TSPAN8-204ENST00000549421 RBCK1Q9BYM8 510 aa6.49□□□□□ -1.37
TSPAN8-204ENST00000549421 DNMT3AQ9Y6K1 912 aaPredicted RBP6.49□□□□□ -1.37
TSPAN8-204ENST00000549421 ERVH48-1M5A8F1 160 aa6.48□□□□□ -1.37
TSPAN8-204ENST00000549421 GNRH1P01148 92 aa6.48□□□□□ -1.37
TSPAN8-204ENST00000549421 GDF10P55107 478 aa6.48□□□□□ -1.37
TSPAN8-204ENST00000549421 EAPPQ56P03 285 aaPredicted RBP6.48□□□□□ -1.37
TSPAN8-204ENST00000549421 FBXO33Q7Z6M2 555 aa6.48□□□□□ -1.37
TSPAN8-204ENST00000549421 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.48□□□□□ -1.37
TSPAN8-204ENST00000549421 KIAA1522Q9P206 1035 aaPredicted RBP6.48□□□□□ -1.37
TSPAN8-204ENST00000549421 TMEM229AB2RXF0 380 aa6.47□□□□□ -1.37
TSPAN8-204ENST00000549421 CD2BP2O95400 341 aaKnown RBP6.47□□□□□ -1.37
TSPAN8-204ENST00000549421 INHAP05111 366 aa6.47□□□□□ -1.37
TSPAN8-204ENST00000549421 PTPN5P54829 565 aa6.47□□□□□ -1.37
TSPAN8-204ENST00000549421 ARHGAP4P98171 946 aa6.47□□□□□ -1.37
TSPAN8-204ENST00000549421 MYT1Q01538 1121 aa6.47□□□□□ -1.37
TSPAN8-204ENST00000549421 KCNC4Q03721 635 aa6.47□□□□□ -1.37
TSPAN8-204ENST00000549421 NOM1Q5C9Z4 860 aaKnown RBP6.47□□□□□ -1.37
TSPAN8-204ENST00000549421 NBPF15Q8N660 670 aa6.47□□□□□ -1.37
TSPAN8-204ENST00000549421 EHBP1Q8NDI1 1231 aa6.47□□□□□ -1.37
TSPAN8-204ENST00000549421 C8orf37Q96NL8 207 aa6.47□□□□□ -1.37
TSPAN8-204ENST00000549421 SLC4A9Q96Q91 983 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms