RNA–Protein interactions for RNA: ENST00000548946.1

UBE2N-202, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3

Gene UBE2N, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-202ENST00000548946 CYP2U1Q7Z449 544 aa9.84□□□□□ -0.83
UBE2N-202ENST00000548946 CCDC155Q8N6L0 562 aa9.83□□□□□ -0.84
UBE2N-202ENST00000548946 SLC35F4A4IF30 521 aa9.82□□□□□ -0.84
UBE2N-202ENST00000548946 RNF144AP50876 292 aaPredicted RBP9.82□□□□□ -0.84
UBE2N-202ENST00000548946 VAC14Q08AM6 782 aa9.82□□□□□ -0.84
UBE2N-202ENST00000548946 FOXD4L5Q5VV16 416 aaPredicted RBP9.82□□□□□ -0.84
UBE2N-202ENST00000548946 LYSMD3Q7Z3D4 306 aa9.82□□□□□ -0.84
UBE2N-202ENST00000548946 STK17AQ9UEE5 414 aa9.82□□□□□ -0.84
UBE2N-202ENST00000548946 A0A1W2PRU2 124 aa9.81□□□□□ -0.84
UBE2N-202ENST00000548946 MEN1O00255 615 aa9.81□□□□□ -0.84
UBE2N-202ENST00000548946 MYCP01106 439 aaPredicted RBP9.81□□□□□ -0.84
UBE2N-202ENST00000548946 GPC1P35052 558 aa9.81□□□□□ -0.84
UBE2N-202ENST00000548946 SCTRP47872 440 aa9.81□□□□□ -0.84
UBE2N-202ENST00000548946 SLFNL1Q499Z3 407 aa9.81□□□□□ -0.84
UBE2N-202ENST00000548946 NLRP3Q96P20 1036 aa9.81□□□□□ -0.84
UBE2N-202ENST00000548946 TRAK2O60296 914 aa9.79□□□□□ -0.84
UBE2N-202ENST00000548946 PRICKLE2Q7Z3G6 844 aa9.79□□□□□ -0.84
UBE2N-202ENST00000548946 WWC1Q8IX03 1113 aa9.79□□□□□ -0.84
UBE2N-202ENST00000548946 CCDC85AQ96PX6 553 aaPredicted RBP9.79□□□□□ -0.84
UBE2N-202ENST00000548946 OSBPL3Q9H4L5 887 aa9.79□□□□□ -0.84
UBE2N-202ENST00000548946 FAM181BA6NEQ2 426 aa9.78□□□□□ -0.84
UBE2N-202ENST00000548946 SOX11P35716 441 aa9.78□□□□□ -0.84
UBE2N-202ENST00000548946 RNF135Q8IUD6 432 aa9.78□□□□□ -0.84
UBE2N-202ENST00000548946 NANOS1Q8WY41 292 aaKnown RBP9.78□□□□□ -0.84
UBE2N-202ENST00000548946 GNRH1P01148 92 aa9.77□□□□□ -0.85
UBE2N-202ENST00000548946 ITGA6P23229 1130 aa9.77□□□□□ -0.85
UBE2N-202ENST00000548946 FLIIQ13045 1269 aa9.77□□□□□ -0.85
UBE2N-202ENST00000548946 USP4Q13107 963 aa9.77□□□□□ -0.85
UBE2N-202ENST00000548946 SEMA3FQ13275 785 aa9.77□□□□□ -0.85
UBE2N-202ENST00000548946 CLN3Q13286 438 aa9.77□□□□□ -0.85
UBE2N-202ENST00000548946 SLC27A3Q5K4L6 730 aa9.77□□□□□ -0.85
UBE2N-202ENST00000548946 PHTF2Q8N3S3 785 aa9.77□□□□□ -0.85
UBE2N-202ENST00000548946 ZSCAN1Q8NBB4 408 aa9.77□□□□□ -0.85
UBE2N-202ENST00000548946 DOLKQ9UPQ8 538 aa9.77□□□□□ -0.85
UBE2N-202ENST00000548946 COG6Q9Y2V7 657 aa9.77□□□□□ -0.85
UBE2N-202ENST00000548946 RAD21O60216 631 aa9.76□□□□□ -0.85
UBE2N-202ENST00000548946 CDCA7Q9BWT1 371 aaPredicted RBP9.76□□□□□ -0.85
UBE2N-202ENST00000548946 ARHGEF10LQ9HCE6 1279 aa9.76□□□□□ -0.85
UBE2N-202ENST00000548946 SENP3-EIF4A1A0A087X0R7 540 aa9.75□□□□□ -0.85
UBE2N-202ENST00000548946 SIRT1Q96EB6 747 aa9.75□□□□□ -0.85
UBE2N-202ENST00000548946 CDC14CA4D256 554 aa9.74□□□□□ -0.85
UBE2N-202ENST00000548946 RHOQP17081 205 aa9.74□□□□□ -0.85
UBE2N-202ENST00000548946 TMEM132AQ24JP5 1023 aa9.74□□□□□ -0.85
UBE2N-202ENST00000548946 SV2AQ7L0J3 742 aa9.74□□□□□ -0.85
UBE2N-202ENST00000548946 MAP7D1Q3KQU3 841 aa9.73□□□□□ -0.85
UBE2N-202ENST00000548946 VWA5B2Q8N398 1253 aa9.73□□□□□ -0.85
UBE2N-202ENST00000548946 ESYT1Q9BSJ8 1104 aa9.73□□□□□ -0.85
UBE2N-202ENST00000548946 GRIP2Q9C0E4 1043 aa9.73□□□□□ -0.85
UBE2N-202ENST00000548946 TSGA10IPQ3SY00 556 aa9.72□□□□□ -0.85
UBE2N-202ENST00000548946 ESCO1Q5FWF5 840 aa9.72□□□□□ -0.85
UBE2N-202ENST00000548946 GPR161Q8N6U8 529 aaKnown RBP9.72□□□□□ -0.85
UBE2N-202ENST00000548946 CNKSR1Q969H4 720 aa9.72□□□□□ -0.85
UBE2N-202ENST00000548946 RAB6BQ9NRW1 208 aa9.72□□□□□ -0.85
UBE2N-202ENST00000548946 CHIC2Q9UKJ5 165 aa9.72□□□□□ -0.85
UBE2N-202ENST00000548946 UBTFP17480 764 aaKnown RBP9.71□□□□□ -0.86
UBE2N-202ENST00000548946 LORP23490 312 aaPredicted RBP9.71□□□□□ -0.86
UBE2N-202ENST00000548946 POU4F2Q12837 409 aa9.71□□□□□ -0.86
UBE2N-202ENST00000548946 OXLD1Q5BKU9 147 aa9.71□□□□□ -0.86
UBE2N-202ENST00000548946 WDR44Q5JSH3 913 aa9.7□□□□□ -0.86
UBE2N-202ENST00000548946 COL25A1Q9BXS0 654 aaPredicted RBP9.7□□□□□ -0.86
UBE2N-202ENST00000548946 SPATA31C2B4DYI2 1134 aa9.69□□□□□ -0.86
UBE2N-202ENST00000548946 IL2RAP01589 272 aa9.69□□□□□ -0.86
UBE2N-202ENST00000548946 GTF2E1P29083 439 aaPredicted RBP9.69□□□□□ -0.86
UBE2N-202ENST00000548946 CENPCQ03188 943 aa9.69□□□□□ -0.86
UBE2N-202ENST00000548946 PLPP7Q8NBV4 271 aa9.69□□□□□ -0.86
UBE2N-202ENST00000548946 XAGE2Q96GT9 111 aa9.69□□□□□ -0.86
UBE2N-202ENST00000548946 GMCL1Q96IK5 515 aa9.69□□□□□ -0.86
UBE2N-202ENST00000548946 CNTNAP3BQ96NU0 1288 aa9.69□□□□□ -0.86
UBE2N-202ENST00000548946 CNTNAP3Q9BZ76 1288 aa9.69□□□□□ -0.86
UBE2N-202ENST00000548946 DYRK1BQ9Y463 629 aa9.69□□□□□ -0.86
UBE2N-202ENST00000548946 NBPF10Q6P3W6 841 aaKnown RBP9.68□□□□□ -0.86
UBE2N-202ENST00000548946 TAS1R3Q7RTX0 852 aa9.68□□□□□ -0.86
UBE2N-202ENST00000548946 NBPF15Q8N660 670 aa9.68□□□□□ -0.86
UBE2N-202ENST00000548946 POM121Q96HA1 1249 aa9.68□□□□□ -0.86
UBE2N-202ENST00000548946 ZSCAN10Q96SZ4 725 aaPredicted RBP9.68□□□□□ -0.86
UBE2N-202ENST00000548946 H7C1W4 665 aa9.67□□□□□ -0.86
UBE2N-202ENST00000548946 WASLO00401 505 aaPredicted RBP9.67□□□□□ -0.86
UBE2N-202ENST00000548946 RIPOR1Q6ZS17 1223 aa9.67□□□□□ -0.86
UBE2N-202ENST00000548946 TIMMDC1Q9NPL8 285 aa9.67□□□□□ -0.86
UBE2N-202ENST00000548946 KRT76Q01546 638 aa9.66□□□□□ -0.86
UBE2N-202ENST00000548946 GAS2L1Q99501 681 aaPredicted RBP9.66□□□□□ -0.86
UBE2N-202ENST00000548946 GNASQ5JWF2 1037 aa9.65□□□□□ -0.86
UBE2N-202ENST00000548946 FOXR1Q6PIV2 292 aa9.65□□□□□ -0.86
UBE2N-202ENST00000548946 TRIM22Q8IYM9 498 aa9.65□□□□□ -0.86
UBE2N-202ENST00000548946 ALG2Q9H553 416 aa9.65□□□□□ -0.86
UBE2N-202ENST00000548946 HRH3Q9Y5N1 445 aa9.65□□□□□ -0.86
UBE2N-202ENST00000548946 TMEM214Q6NUQ4 689 aaKnown RBP9.64□□□□□ -0.87
UBE2N-202ENST00000548946 CUEDC1Q9NWM3 386 aaPredicted RBP9.64□□□□□ -0.87
UBE2N-202ENST00000548946 LZTS3O60299 673 aaPredicted RBP9.63□□□□□ -0.87
UBE2N-202ENST00000548946 SKIP12755 728 aa9.63□□□□□ -0.87
UBE2N-202ENST00000548946 RNFT1Q5M7Z0 435 aa9.63□□□□□ -0.87
UBE2N-202ENST00000548946 FHDC1Q9C0D6 1143 aaPredicted RBP9.63□□□□□ -0.87
UBE2N-202ENST00000548946 ETNK1Q9HBU6 452 aa9.63□□□□□ -0.87
UBE2N-202ENST00000548946 F11P03951 625 aa9.62□□□□□ -0.87
UBE2N-202ENST00000548946 EML3Q32P44 896 aa9.62□□□□□ -0.87
UBE2N-202ENST00000548946 NFATC2IPQ8NCF5 419 aa9.62□□□□□ -0.87
UBE2N-202ENST00000548946 ZNF837Q96EG3 531 aaPredicted RBP9.62□□□□□ -0.87
UBE2N-202ENST00000548946 PIK3CDO00329 1044 aa9.61□□□□□ -0.87
UBE2N-202ENST00000548946 GDF10P55107 478 aa9.61□□□□□ -0.87
UBE2N-202ENST00000548946 TLR1Q15399 786 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms