RNA–Protein interactions for RNA: ENST00000548620.1

USP15-209, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 3

Gene USP15, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-209ENST00000548620 OXLD1Q5BKU9 147 aa10.86□□□□□ -0.67
USP15-209ENST00000548620 SPINT1O43278 529 aa10.85□□□□□ -0.67
USP15-209ENST00000548620 MYCP01106 439 aaPredicted RBP10.85□□□□□ -0.67
USP15-209ENST00000548620 ZNF787Q6DD87 383 aa10.85□□□□□ -0.67
USP15-209ENST00000548620 TBC1D9Q6ZT07 1266 aa10.85□□□□□ -0.67
USP15-209ENST00000548620 KIFC2Q96AC6 838 aa10.85□□□□□ -0.67
USP15-209ENST00000548620 C11orf95C9JLR9 678 aaPredicted RBP10.84□□□□□ -0.67
USP15-209ENST00000548620 ATP5J2-PTCD1G3V325 749 aa10.84□□□□□ -0.67
USP15-209ENST00000548620 SNRPBP14678 240 aaKnown RBP10.84□□□□□ -0.67
USP15-209ENST00000548620 PTGIRP43119 386 aa10.84□□□□□ -0.67
USP15-209ENST00000548620 USP4Q13107 963 aa10.84□□□□□ -0.67
USP15-209ENST00000548620 CYP2U1Q7Z449 544 aa10.84□□□□□ -0.67
USP15-209ENST00000548620 USP17L5A8MUK1 530 aa10.83□□□□□ -0.68
USP15-209ENST00000548620 ATP9BO43861 1147 aa10.83□□□□□ -0.68
USP15-209ENST00000548620 ZNF395Q9H8N7 513 aaPredicted RBP10.83□□□□□ -0.68
USP15-209ENST00000548620 SIRT1Q96EB6 747 aa10.82□□□□□ -0.68
USP15-209ENST00000548620 ESF1Q9H501 851 aaKnown RBP10.82□□□□□ -0.68
USP15-209ENST00000548620 LZTS3O60299 673 aaPredicted RBP10.81□□□□□ -0.68
USP15-209ENST00000548620 NCOA4Q13772 614 aa10.81□□□□□ -0.68
USP15-209ENST00000548620 INSM2Q96T92 566 aaPredicted RBP10.81□□□□□ -0.68
USP15-209ENST00000548620 SOS2Q07890 1332 aaPredicted RBP10.81□□□□□ -0.68
USP15-209ENST00000548620 EML3Q32P44 896 aa10.8□□□□□ -0.68
USP15-209ENST00000548620 PLEKHM2Q8IWE5 1019 aa10.8□□□□□ -0.68
USP15-209ENST00000548620 DEPDC4Q8N2C3 294 aa10.8□□□□□ -0.68
USP15-209ENST00000548620 USP17L3A6NCW0 530 aa10.79□□□□□ -0.68
USP15-209ENST00000548620 USP17L4A6NCW7 530 aa10.79□□□□□ -0.68
USP15-209ENST00000548620 PALM3A6NDB9 673 aaPredicted RBP10.79□□□□□ -0.68
USP15-209ENST00000548620 CTSOP43234 321 aaPredicted RBP10.79□□□□□ -0.68
USP15-209ENST00000548620 USP17L2Q6R6M4 530 aa10.79□□□□□ -0.68
USP15-209ENST00000548620 USP17L1Q7RTZ2 530 aa10.79□□□□□ -0.68
USP15-209ENST00000548620 PPP1R12CQ9BZL4 782 aa10.79□□□□□ -0.68
USP15-209ENST00000548620 ARHGEF10LQ9HCE6 1279 aa10.79□□□□□ -0.68
USP15-209ENST00000548620 TFIP11Q9UBB9 837 aaKnown RBP10.79□□□□□ -0.68
USP15-209ENST00000548620 A0A1W2PRU2 124 aa10.78□□□□□ -0.68
USP15-209ENST00000548620 GNRH1P01148 92 aa10.78□□□□□ -0.68
USP15-209ENST00000548620 TTLL8A6PVC2 850 aa10.77□□□□□ -0.69
USP15-209ENST00000548620 SOBPA7XYQ1 873 aa10.77□□□□□ -0.69
USP15-209ENST00000548620 ERICH6Q7L0X2 663 aa10.77□□□□□ -0.69
USP15-209ENST00000548620 POLMQ9NP87 494 aaPredicted RBP10.77□□□□□ -0.69
USP15-209ENST00000548620 DNMT3LQ9UJW3 386 aa10.77□□□□□ -0.69
USP15-209ENST00000548620 TIMELESSQ9UNS1 1208 aa10.77□□□□□ -0.69
USP15-209ENST00000548620 NOD1Q9Y239 953 aa10.77□□□□□ -0.69
USP15-209ENST00000548620 MAFBQ9Y5Q3 323 aaPredicted RBP10.77□□□□□ -0.69
USP15-209ENST00000548620 ARID3CA6NKF2 412 aa10.76□□□□□ -0.69
USP15-209ENST00000548620 CLN3Q13286 438 aa10.76□□□□□ -0.69
USP15-209ENST00000548620 FOXD4L5Q5VV16 416 aaPredicted RBP10.76□□□□□ -0.69
USP15-209ENST00000548620 RAB6BQ9NRW1 208 aa10.76□□□□□ -0.69
USP15-209ENST00000548620 PCDHGA11Q9Y5H2 935 aa10.76□□□□□ -0.69
USP15-209ENST00000548620 MEN1O00255 615 aa10.75□□□□□ -0.69
USP15-209ENST00000548620 STAU1O95793 577 aaKnown RBP10.75□□□□□ -0.69
USP15-209ENST00000548620 RNF217Q8TC41 542 aa10.75□□□□□ -0.69
USP15-209ENST00000548620 MAN1A2O60476 641 aa10.74□□□□□ -0.69
USP15-209ENST00000548620 IL2RAP01589 272 aa10.74□□□□□ -0.69
USP15-209ENST00000548620 CFAP70Q5T0N1 1121 aa10.74□□□□□ -0.69
USP15-209ENST00000548620 ETNK1Q9HBU6 452 aa10.74□□□□□ -0.69
USP15-209ENST00000548620 FIGNL2A6NMB9 653 aa10.73□□□□□ -0.69
USP15-209ENST00000548620 RNF144AP50876 292 aaPredicted RBP10.73□□□□□ -0.69
USP15-209ENST00000548620 SCNN1DP51172 638 aa10.73□□□□□ -0.69
USP15-209ENST00000548620 GTF2IP78347 998 aa10.73□□□□□ -0.69
USP15-209ENST00000548620 CNKSR1Q969H4 720 aa10.72□□□□□ -0.69
USP15-209ENST00000548620 XAGE2Q96GT9 111 aa10.72□□□□□ -0.69
USP15-209ENST00000548620 ESYT1Q9BSJ8 1104 aa10.72□□□□□ -0.69
USP15-209ENST00000548620 MKRN1Q9UHC7 482 aaKnown RBP10.72□□□□□ -0.69
USP15-209ENST00000548620 HRH3Q9Y5N1 445 aa10.72□□□□□ -0.69
USP15-209ENST00000548620 LMOD1P29536 600 aaPredicted RBP10.71□□□□□ -0.69
USP15-209ENST00000548620 GPC1P35052 558 aa10.71□□□□□ -0.69
USP15-209ENST00000548620 NLRP3Q96P20 1036 aa10.71□□□□□ -0.69
USP15-209ENST00000548620 C1orf115Q9H7X2 142 aa10.71□□□□□ -0.69
USP15-209ENST00000548620 GDF10P55107 478 aa10.7□□□□□ -0.7
USP15-209ENST00000548620 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.7□□□□□ -0.7
USP15-209ENST00000548620 ESCO1Q5FWF5 840 aa10.7□□□□□ -0.7
USP15-209ENST00000548620 TRIM50Q86XT4 487 aa10.7□□□□□ -0.7
USP15-209ENST00000548620 TMEM229AB2RXF0 380 aa10.69□□□□□ -0.7
USP15-209ENST00000548620 WASLO00401 505 aaPredicted RBP10.69□□□□□ -0.7
USP15-209ENST00000548620 INHAP05111 366 aa10.69□□□□□ -0.7
USP15-209ENST00000548620 CLDN10P78369 228 aa10.69□□□□□ -0.7
USP15-209ENST00000548620 KIAA1024Q9UPX6 916 aa10.69□□□□□ -0.7
USP15-209ENST00000548620 ZBTB7BO15156 539 aaPredicted RBP10.68□□□□□ -0.7
USP15-209ENST00000548620 KANK4Q5T7N3 995 aaPredicted RBP10.68□□□□□ -0.7
USP15-209ENST00000548620 GRIP2Q9C0E4 1043 aa10.68□□□□□ -0.7
USP15-209ENST00000548620 ATP1A2P50993 1020 aa10.67□□□□□ -0.7
USP15-209ENST00000548620 CENPCQ03188 943 aa10.67□□□□□ -0.7
USP15-209ENST00000548620 PSME1Q06323 249 aa10.67□□□□□ -0.7
USP15-209ENST00000548620 LYSMD3Q7Z3D4 306 aa10.67□□□□□ -0.7
USP15-209ENST00000548620 OGFOD1Q8N543 542 aa10.67□□□□□ -0.7
USP15-209ENST00000548620 FHDC1Q9C0D6 1143 aaPredicted RBP10.67□□□□□ -0.7
USP15-209ENST00000548620 SLC27A3Q5K4L6 730 aa10.66□□□□□ -0.7
USP15-209ENST00000548620 PRICKLE2Q7Z3G6 844 aa10.66□□□□□ -0.7
USP15-209ENST00000548620 CCDC97Q96F63 343 aaPredicted RBP10.66□□□□□ -0.7
USP15-209ENST00000548620 DNAAF2Q9NVR5 837 aaKnown RBP10.66□□□□□ -0.7
USP15-209ENST00000548620 LARGE2Q8N3Y3 721 aa10.65□□□□□ -0.7
USP15-209ENST00000548620 TPCN2Q8NHX9 752 aa10.65□□□□□ -0.7
USP15-209ENST00000548620 ZNF775Q96BV0 537 aaPredicted RBP10.65□□□□□ -0.7
USP15-209ENST00000548620 SERPINA10Q9UK55 444 aa10.65□□□□□ -0.7
USP15-209ENST00000548620 DKK1O94907 266 aa10.64□□□□□ -0.71
USP15-209ENST00000548620 RASA1P20936 1047 aa10.64□□□□□ -0.71
USP15-209ENST00000548620 RFX1P22670 979 aa10.64□□□□□ -0.71
USP15-209ENST00000548620 PTSQ03393 145 aa10.64□□□□□ -0.71
USP15-209ENST00000548620 TLR1Q15399 786 aa10.64□□□□□ -0.71
USP15-209ENST00000548620 CCDC102BQ68D86 513 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms