RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 ONECUT3O60422 494 aaPredicted RBP11.88□□□□□ -0.51
SP1-203ENST00000548560 HOXC9P31274 260 aa11.88□□□□□ -0.51
SP1-203ENST00000548560 KRT27Q7Z3Y8 459 aa11.88□□□□□ -0.51
SP1-203ENST00000548560 BBXQ8WY36 941 aaPredicted RBP11.88□□□□□ -0.51
SP1-203ENST00000548560 FBLN1P23142 703 aa11.87□□□□□ -0.51
SP1-203ENST00000548560 TNNT2P45379 298 aaPredicted RBP11.87□□□□□ -0.51
SP1-203ENST00000548560 MORC1Q86VD1 984 aa11.87□□□□□ -0.51
SP1-203ENST00000548560 VSIG10Q8N0Z9 540 aa11.87□□□□□ -0.51
SP1-203ENST00000548560 LTV1Q96GA3 475 aaPredicted RBP11.87□□□□□ -0.51
SP1-203ENST00000548560 CARD10Q9BWT7 1032 aa11.87□□□□□ -0.51
SP1-203ENST00000548560 NLRP2Q9NX02 1062 aa11.87□□□□□ -0.51
SP1-203ENST00000548560 ZBTB47Q9UFB7 747 aaPredicted RBP11.87□□□□□ -0.51
SP1-203ENST00000548560 RGPD1P0DJD0 1748 aa11.86□□□□□ -0.51
SP1-203ENST00000548560 PPM1GO15355 546 aaPredicted RBP11.86□□□□□ -0.51
SP1-203ENST00000548560 CDCA7Q9BWT1 371 aaPredicted RBP11.86□□□□□ -0.51
SP1-203ENST00000548560 INSRP06213 1382 aa11.85□□□□□ -0.51
SP1-203ENST00000548560 EMILIN1Q9Y6C2 1016 aa11.85□□□□□ -0.51
SP1-203ENST00000548560 PDE3BQ13370 1112 aa11.84□□□□□ -0.51
SP1-203ENST00000548560 CC2D1BQ5T0F9 858 aaKnown RBP11.84□□□□□ -0.51
SP1-203ENST00000548560 KAT6BQ8WYB5 2073 aa11.83□□□□□ -0.51
SP1-203ENST00000548560 TNS1Q9HBL0 1735 aaKnown RBP11.83□□□□□ -0.52
SP1-203ENST00000548560 NPC1L1Q9UHC9 1359 aa11.83□□□□□ -0.52
SP1-203ENST00000548560 DDB1Q16531 1140 aa11.83□□□□□ -0.52
SP1-203ENST00000548560 TNS2Q63HR2 1409 aa11.83□□□□□ -0.52
SP1-203ENST00000548560 SBF2Q86WG5 1849 aa11.83□□□□□ -0.52
SP1-203ENST00000548560 PER1O15534 1290 aaPredicted RBP11.82□□□□□ -0.52
SP1-203ENST00000548560 IL2RBP14784 551 aa11.82□□□□□ -0.52
SP1-203ENST00000548560 CNGB1Q14028 1251 aaPredicted RBP11.82□□□□□ -0.52
SP1-203ENST00000548560 HSP90AB2PQ58FF8 381 aa11.82□□□□□ -0.52
SP1-203ENST00000548560 RBM42Q9BTD8 480 aaKnown RBP11.82□□□□□ -0.52
SP1-203ENST00000548560 DISP2A7MBM2 1401 aa11.82□□□□□ -0.52
SP1-203ENST00000548560 OVOS2A0A0G2JMS6 1433 aa11.81□□□□□ -0.52
SP1-203ENST00000548560 SF3B2Q13435 895 aaKnown RBP11.81□□□□□ -0.52
SP1-203ENST00000548560 PAXIP1Q6ZW49 1069 aaPredicted RBP11.81□□□□□ -0.52
SP1-203ENST00000548560 POLKQ9UBT6 870 aa11.81□□□□□ -0.52
SP1-203ENST00000548560 CIZ1Q9ULV3 898 aaPredicted RBP11.81□□□□□ -0.52
SP1-203ENST00000548560 SHANK3Q9BYB0 1731 aa11.8□□□□□ -0.52
SP1-203ENST00000548560 LRP5O75197 1615 aa11.8□□□□□ -0.52
SP1-203ENST00000548560 CCDC125Q86Z20 511 aa11.8□□□□□ -0.52
SP1-203ENST00000548560 CFAP44Q96MT7 982 aa11.8□□□□□ -0.52
SP1-203ENST00000548560 EXOC5O00471 708 aa11.79□□□□□ -0.52
SP1-203ENST00000548560 FAM196AQ6ZSG2 479 aa11.79□□□□□ -0.52
SP1-203ENST00000548560 PKD1L3Q7Z443 1732 aa11.78□□□□□ -0.52
SP1-203ENST00000548560 FAM182BQ5T319 152 aa11.78□□□□□ -0.52
SP1-203ENST00000548560 RAPGEF4Q8WZA2 1011 aa11.78□□□□□ -0.52
SP1-203ENST00000548560 MEGF6O75095 1541 aa11.77□□□□□ -0.52
SP1-203ENST00000548560 RGL2O15211 777 aa11.77□□□□□ -0.53
SP1-203ENST00000548560 NBPF6Q5VWK0 638 aa11.77□□□□□ -0.53
SP1-203ENST00000548560 USHBP1Q8N6Y0 703 aa11.77□□□□□ -0.53
SP1-203ENST00000548560 NBPF4Q96M43 638 aa11.77□□□□□ -0.53
SP1-203ENST00000548560 NHSQ6T4R5 1651 aa11.76□□□□□ -0.53
SP1-203ENST00000548560 TATP17735 454 aaPredicted RBP11.76□□□□□ -0.53
SP1-203ENST00000548560 EIF4A2Q14240 407 aaKnown RBP11.76□□□□□ -0.53
SP1-203ENST00000548560 DOT1LQ8TEK3 1739 aa11.76□□□□□ -0.53
SP1-203ENST00000548560 MTHFSP49914 203 aa11.75□□□□□ -0.53
SP1-203ENST00000548560 DDX10Q13206 875 aaKnown RBP11.75□□□□□ -0.53
SP1-203ENST00000548560 DEFB132Q7Z7B7 95 aa11.75□□□□□ -0.53
SP1-203ENST00000548560 NCAPD2Q15021 1401 aa11.75□□□□□ -0.53
SP1-203ENST00000548560 RGPD3A6NKT7 1758 aaPredicted RBP11.74□□□□□ -0.53
SP1-203ENST00000548560 RGPD4Q7Z3J3 1758 aa11.74□□□□□ -0.53
SP1-203ENST00000548560 BAG6P46379 1132 aa11.74□□□□□ -0.53
SP1-203ENST00000548560 RREB1Q92766 1687 aa11.74□□□□□ -0.53
SP1-203ENST00000548560 BCL9O00512 1426 aa11.73□□□□□ -0.53
SP1-203ENST00000548560 BTAF1O14981 1849 aa11.73□□□□□ -0.53
SP1-203ENST00000548560 TRIM37O94972 964 aa11.73□□□□□ -0.53
SP1-203ENST00000548560 IGSF1Q8N6C5 1336 aa11.73□□□□□ -0.53
SP1-203ENST00000548560 MARCH10Q8NA82 808 aaPredicted RBP11.73□□□□□ -0.53
SP1-203ENST00000548560 ZCRB1Q8TBF4 217 aaKnown RBP11.73□□□□□ -0.53
SP1-203ENST00000548560 CFAP53Q96M91 514 aa11.73□□□□□ -0.53
SP1-203ENST00000548560 EYA1Q99502 592 aa11.73□□□□□ -0.53
SP1-203ENST00000548560 VIRMAQ69YN4 1812 aaKnown RBP11.72□□□□□ -0.53
SP1-203ENST00000548560 PCDH11XQ9BZA7 1347 aa11.72□□□□□ -0.53
SP1-203ENST00000548560 PCDH11YQ9BZA8 1340 aa11.72□□□□□ -0.53
SP1-203ENST00000548560 DDX54Q8TDD1 881 aaKnown RBP11.72□□□□□ -0.53
SP1-203ENST00000548560 PLEKHG2Q9H7P9 1386 aa11.71□□□□□ -0.53
SP1-203ENST00000548560 DIAPH1O60610 1272 aaKnown RBP11.71□□□□□ -0.53
SP1-203ENST00000548560 SPRYD3Q8NCJ5 442 aa11.71□□□□□ -0.53
SP1-203ENST00000548560 SPG7Q9UQ90 795 aa11.71□□□□□ -0.53
SP1-203ENST00000548560 ITGB4P16144 1822 aa11.71□□□□□ -0.54
SP1-203ENST00000548560 NUP188Q5SRE5 1749 aa11.71□□□□□ -0.54
SP1-203ENST00000548560 COL3A1P02461 1466 aaPredicted RBP11.7□□□□□ -0.54
SP1-203ENST00000548560 PARD3Q8TEW0 1356 aa11.7□□□□□ -0.54
SP1-203ENST00000548560 ZNF316A6NFI3 1004 aaPredicted RBP11.7□□□□□ -0.54
SP1-203ENST00000548560 APBA3O96018 575 aa11.7□□□□□ -0.54
SP1-203ENST00000548560 PPP2R1AP30153 589 aa11.7□□□□□ -0.54
SP1-203ENST00000548560 IL13P35225 146 aa11.69□□□□□ -0.54
SP1-203ENST00000548560 TOGARAM1Q9Y4F4 1720 aa11.69□□□□□ -0.54
SP1-203ENST00000548560 RALBP1Q15311 655 aa11.68□□□□□ -0.54
SP1-203ENST00000548560 SULT6B1Q6IMI4 303 aa11.68□□□□□ -0.54
SP1-203ENST00000548560 ACSBG1Q96GR2 724 aa11.68□□□□□ -0.54
SP1-203ENST00000548560 BCL11BQ9C0K0 894 aaPredicted RBP11.68□□□□□ -0.54
SP1-203ENST00000548560 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.68□□□□□ -0.544e-7■□□□□ 8.8
SP1-203ENST00000548560 KDRP35968 1356 aa11.67□□□□□ -0.54
SP1-203ENST00000548560 U2SURPO15042 1029 aaKnown RBP11.67□□□□□ -0.54
SP1-203ENST00000548560 EN1Q05925 392 aaPredicted RBP11.67□□□□□ -0.54
SP1-203ENST00000548560 SYTL4Q96C24 671 aaPredicted RBP11.67□□□□□ -0.54
SP1-203ENST00000548560 NUDCQ9Y266 331 aa11.67□□□□□ -0.54
SP1-203ENST00000548560 AMOTQ4VCS5 1084 aa11.66□□□□□ -0.54
SP1-203ENST00000548560 PLEKHO1Q53GL0 409 aaPredicted RBP11.66□□□□□ -0.54
SP1-203ENST00000548560 AEBP1Q8IUX7 1158 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms