RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 SMG6Q86US8 1419 aaKnown RBP13.05□□□□□ -0.32
USP15-208ENST00000548524 MYOM1P52179 1685 aa13.05□□□□□ -0.32
USP15-208ENST00000548524 FLT4P35916 1363 aa13.05□□□□□ -0.32
USP15-208ENST00000548524 PARP4Q9UKK3 1724 aaKnown RBP13.05□□□□□ -0.32
USP15-208ENST00000548524 TNS2Q63HR2 1409 aa13.05□□□□□ -0.32
USP15-208ENST00000548524 TNNT2P45379 298 aaPredicted RBP13.04□□□□□ -0.32
USP15-208ENST00000548524 HSP90AB2PQ58FF8 381 aa13.04□□□□□ -0.32
USP15-208ENST00000548524 CAMKK2Q96RR4 588 aa13.04□□□□□ -0.32
USP15-208ENST00000548524 EMILIN1Q9Y6C2 1016 aa13.04□□□□□ -0.32
USP15-208ENST00000548524 LRRC37A3O60309 1634 aa13.03□□□□□ -0.32
USP15-208ENST00000548524 LTN1O94822 1766 aa13.03□□□□□ -0.32
USP15-208ENST00000548524 BCL11BQ9C0K0 894 aaPredicted RBP13.03□□□□□ -0.32
USP15-208ENST00000548524 KNSTRNQ9Y448 316 aa13.03□□□□□ -0.32
USP15-208ENST00000548524 KIF7Q2M1P5 1343 aa13.03□□□□□ -0.32
USP15-208ENST00000548524 INSRP06213 1382 aa13.03□□□□□ -0.32
USP15-208ENST00000548524 KIF24Q5T7B8 1368 aa13.03□□□□□ -0.32
USP15-208ENST00000548524 RGPD1P0DJD0 1748 aa13.02□□□□□ -0.32
USP15-208ENST00000548524 RGPD5Q99666 1765 aa13.02□□□□□ -0.32
USP15-208ENST00000548524 PRR29P0C7W0 189 aa13.02□□□□□ -0.33
USP15-208ENST00000548524 NBPF6Q5VWK0 638 aa13.02□□□□□ -0.33
USP15-208ENST00000548524 USHBP1Q8N6Y0 703 aa13.02□□□□□ -0.33
USP15-208ENST00000548524 DDX54Q8TDD1 881 aaKnown RBP13.02□□□□□ -0.33
USP15-208ENST00000548524 NBPF4Q96M43 638 aa13.02□□□□□ -0.33
USP15-208ENST00000548524 PARD3Q8TEW0 1356 aa13.02□□□□□ -0.33
USP15-208ENST00000548524 MORC1Q86VD1 984 aa13.01□□□□□ -0.33
USP15-208ENST00000548524 RAPGEF4Q8WZA2 1011 aa13.01□□□□□ -0.33
USP15-208ENST00000548524 ACSBG1Q96GR2 724 aa13.01□□□□□ -0.33
USP15-208ENST00000548524 BCL9O00512 1426 aa13.01□□□□□ -0.33
USP15-208ENST00000548524 NSD2O96028 1365 aa13□□□□□ -0.33
USP15-208ENST00000548524 PSDA5PKW4 1024 aaPredicted RBP13□□□□□ -0.33
USP15-208ENST00000548524 ZCRB1Q8TBF4 217 aaKnown RBP13□□□□□ -0.33
USP15-208ENST00000548524 POLKQ9UBT6 870 aa13□□□□□ -0.33
USP15-208ENST00000548524 KIF20BQ96Q89 1820 aa12.99□□□□□ -0.33
USP15-208ENST00000548524 WASHC2AQ641Q2 1341 aa12.99□□□□□ -0.33
USP15-208ENST00000548524 TATP17735 454 aaPredicted RBP12.99□□□□□ -0.33
USP15-208ENST00000548524 R3HDM1Q15032 1099 aaKnown RBP12.99□□□□□ -0.33
USP15-208ENST00000548524 NBPF14Q5TI25 921 aa12.99□□□□□ -0.33
USP15-208ENST00000548524 PTF1AQ7RTS3 328 aa12.99□□□□□ -0.33
USP15-208ENST00000548524 PLSCR1O15162 318 aa12.98□□□□□ -0.33
USP15-208ENST00000548524 KCNQ2O43526 872 aa12.98□□□□□ -0.33
USP15-208ENST00000548524 MIER1Q8N108 512 aa12.98□□□□□ -0.33
USP15-208ENST00000548524 TNS1Q9HBL0 1735 aaKnown RBP12.98□□□□□ -0.33
USP15-208ENST00000548524 WNK3Q9BYP7 1800 aa12.97□□□□□ -0.33
USP15-208ENST00000548524 PEAK1Q9H792 1746 aa12.96□□□□□ -0.33
USP15-208ENST00000548524 PLCD3Q8N3E9 789 aa12.96□□□□□ -0.33
USP15-208ENST00000548524 MEGF6O75095 1541 aa12.96□□□□□ -0.33
USP15-208ENST00000548524 FAM208AQ9UK61 1670 aaKnown RBP12.96□□□□□ -0.34
USP15-208ENST00000548524 AMER1Q5JTC6 1135 aaPredicted RBP12.95□□□□□ -0.34
USP15-208ENST00000548524 SYTL4Q96C24 671 aaPredicted RBP12.95□□□□□ -0.34
USP15-208ENST00000548524 EIF4A2Q14240 407 aaKnown RBP12.94□□□□□ -0.34
USP15-208ENST00000548524 EYA1Q99502 592 aa12.94□□□□□ -0.34
USP15-208ENST00000548524 PRIM1P49642 420 aaKnown RBP12.93□□□□□ -0.34
USP15-208ENST00000548524 CNGB1Q14028 1251 aaPredicted RBP12.93□□□□□ -0.34
USP15-208ENST00000548524 TXNRD1Q16881 649 aa12.93□□□□□ -0.34
USP15-208ENST00000548524 CC2D1BQ5T0F9 858 aaKnown RBP12.93□□□□□ -0.34
USP15-208ENST00000548524 PCDH11XQ9BZA7 1347 aa12.92□□□□□ -0.34
USP15-208ENST00000548524 PCDH11YQ9BZA8 1340 aa12.92□□□□□ -0.34
USP15-208ENST00000548524 CHRDL2Q6WN34 429 aa12.92□□□□□ -0.34
USP15-208ENST00000548524 SPG7Q9UQ90 795 aa12.92□□□□□ -0.34
USP15-208ENST00000548524 PER1O15534 1290 aaPredicted RBP12.91□□□□□ -0.34
USP15-208ENST00000548524 IFNLR1Q8IU57 520 aaPredicted RBP12.91□□□□□ -0.34
USP15-208ENST00000548524 STK32BQ9NY57 414 aa12.9□□□□□ -0.34
USP15-208ENST00000548524 CYP27B1O15528 508 aa12.89□□□□□ -0.35
USP15-208ENST00000548524 ANO8Q9HCE9 1232 aaPredicted RBP12.89□□□□□ -0.35
USP15-208ENST00000548524 IGSF1Q8N6C5 1336 aa12.88□□□□□ -0.35
USP15-208ENST00000548524 NCAPD2Q15021 1401 aa12.88□□□□□ -0.35
USP15-208ENST00000548524 MTHFSP49914 203 aa12.88□□□□□ -0.35
USP15-208ENST00000548524 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.88□□□□□ -0.351e-9■■■□□ 15.6
USP15-208ENST00000548524 ANKRD26Q9UPS8 1709 aa12.88□□□□□ -0.35
USP15-208ENST00000548524 RGPD2P0DJD1 1756 aa12.87□□□□□ -0.35
USP15-208ENST00000548524 NHSQ6T4R5 1651 aa12.87□□□□□ -0.35
USP15-208ENST00000548524 SBF2Q86WG5 1849 aa12.87□□□□□ -0.35
USP15-208ENST00000548524 RREB1Q92766 1687 aa12.86□□□□□ -0.35
USP15-208ENST00000548524 NPC1L1Q9UHC9 1359 aa12.86□□□□□ -0.35
USP15-208ENST00000548524 SLC15A2Q16348 729 aa12.86□□□□□ -0.35
USP15-208ENST00000548524 PLEKHO1Q53GL0 409 aaPredicted RBP12.86□□□□□ -0.35
USP15-208ENST00000548524 SLC27A3Q5K4L6 730 aa12.86□□□□□ -0.35
USP15-208ENST00000548524 IFNL2Q8IZJ0 200 aa12.86□□□□□ -0.35
USP15-208ENST00000548524 KLHL34Q8N239 644 aa12.86□□□□□ -0.35
USP15-208ENST00000548524 CREBZFQ9NS37 354 aa12.86□□□□□ -0.35
USP15-208ENST00000548524 NUP188Q5SRE5 1749 aa12.85□□□□□ -0.35
USP15-208ENST00000548524 PHKG2P15735 406 aa12.85□□□□□ -0.35
USP15-208ENST00000548524 IL13P35225 146 aa12.85□□□□□ -0.35
USP15-208ENST00000548524 SULT6B1Q6IMI4 303 aa12.85□□□□□ -0.35
USP15-208ENST00000548524 MPRIPQ6WCQ1 1025 aa12.85□□□□□ -0.35
USP15-208ENST00000548524 RGPD3A6NKT7 1758 aaPredicted RBP12.84□□□□□ -0.35
USP15-208ENST00000548524 RGPD4Q7Z3J3 1758 aa12.84□□□□□ -0.35
USP15-208ENST00000548524 MAP2P11137 1827 aaKnown RBP12.84□□□□□ -0.35
USP15-208ENST00000548524 NKX1-1Q15270 411 aaPredicted RBP12.84□□□□□ -0.35
USP15-208ENST00000548524 AMOTQ4VCS5 1084 aa12.84□□□□□ -0.35
USP15-208ENST00000548524 AEBP1Q8IUX7 1158 aa12.84□□□□□ -0.35
USP15-208ENST00000548524 LRRC4BQ9NT99 713 aa12.84□□□□□ -0.35
USP15-208ENST00000548524 CCNL1Q9UK58 526 aaPredicted RBP12.84□□□□□ -0.35
USP15-208ENST00000548524 DIAPH1O60610 1272 aaKnown RBP12.83□□□□□ -0.36
USP15-208ENST00000548524 HSP90AB1P08238 724 aaKnown RBP12.83□□□□□ -0.36
USP15-208ENST00000548524 KCNQ4P56696 695 aa12.83□□□□□ -0.36
USP15-208ENST00000548524 ZNF530Q6P9A1 599 aaPredicted RBP12.83□□□□□ -0.36
USP15-208ENST00000548524 SPON1Q9HCB6 807 aa12.83□□□□□ -0.36
USP15-208ENST00000548524 PLEKHG2Q9H7P9 1386 aa12.82□□□□□ -0.36
USP15-208ENST00000548524 SMARCC1Q92922 1105 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms