RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 CEP126Q9P2H0 1117 aa8.39□□□□□ -1.07
DEPDC4-205ENST00000548313 TTLL8A6PVC2 850 aa8.38□□□□□ -1.07
DEPDC4-205ENST00000548313 KRT76Q01546 638 aa8.38□□□□□ -1.07
DEPDC4-205ENST00000548313 RNF20Q5VTR2 975 aa8.38□□□□□ -1.07
DEPDC4-205ENST00000548313 SEPT12Q8IYM1 358 aa8.38□□□□□ -1.07
DEPDC4-205ENST00000548313 GPR161Q8N6U8 529 aaKnown RBP8.38□□□□□ -1.07
DEPDC4-205ENST00000548313 NANOS1Q8WY41 292 aaKnown RBP8.38□□□□□ -1.07
DEPDC4-205ENST00000548313 KCTD15Q96SI1 283 aaPredicted RBP8.38□□□□□ -1.07
DEPDC4-205ENST00000548313 ESPNB1AK53 854 aa8.37□□□□□ -1.07
DEPDC4-205ENST00000548313 PTSQ03393 145 aa8.37□□□□□ -1.07
DEPDC4-205ENST00000548313 CCDC116Q8IYX3 515 aa8.37□□□□□ -1.07
DEPDC4-205ENST00000548313 GLMNQ92990 594 aa8.37□□□□□ -1.07
DEPDC4-205ENST00000548313 TRIM52Q96A61 297 aa8.37□□□□□ -1.07
DEPDC4-205ENST00000548313 CALR3Q96L12 384 aaKnown RBP8.37□□□□□ -1.07
DEPDC4-205ENST00000548313 COL25A1Q9BXS0 654 aaPredicted RBP8.36□□□□□ -1.07
DEPDC4-205ENST00000548313 ADAMTS19Q8TE59 1207 aa8.35□□□□□ -1.07
DEPDC4-205ENST00000548313 GIGYF1O75420 1035 aaPredicted RBP8.34□□□□□ -1.07
DEPDC4-205ENST00000548313 DHX9Q08211 1270 aaKnown RBP8.34□□□□□ -1.07
DEPDC4-205ENST00000548313 SLFNL1Q499Z3 407 aa8.34□□□□□ -1.07
DEPDC4-205ENST00000548313 PHTF2Q8N3S3 785 aa8.34□□□□□ -1.07
DEPDC4-205ENST00000548313 SVOPQ8N4V2 548 aa8.34□□□□□ -1.07
DEPDC4-205ENST00000548313 NFATC2IPQ8NCF5 419 aa8.34□□□□□ -1.07
DEPDC4-205ENST00000548313 PGPEP1Q9NXJ5 209 aa8.34□□□□□ -1.07
DEPDC4-205ENST00000548313 CCDC155Q8N6L0 562 aa8.33□□□□□ -1.08
DEPDC4-205ENST00000548313 FIGNL2A6NMB9 653 aa8.32□□□□□ -1.08
DEPDC4-205ENST00000548313 IGHA1P01876 353 aa8.32□□□□□ -1.08
DEPDC4-205ENST00000548313 INTS6LQ5JSJ4 861 aaKnown RBP8.32□□□□□ -1.08
DEPDC4-205ENST00000548313 ZNF385CQ66K41 422 aaPredicted RBP8.32□□□□□ -1.08
DEPDC4-205ENST00000548313 CHIC2Q9UKJ5 165 aa8.32□□□□□ -1.08
DEPDC4-205ENST00000548313 SPINT1O43278 529 aa8.31□□□□□ -1.08
DEPDC4-205ENST00000548313 SLURP2P0DP57 97 aa8.31□□□□□ -1.08
DEPDC4-205ENST00000548313 MAP7D1Q3KQU3 841 aa8.31□□□□□ -1.08
DEPDC4-205ENST00000548313 Q6ZVU0 165 aa8.31□□□□□ -1.08
DEPDC4-205ENST00000548313 RNF135Q8IUD6 432 aa8.31□□□□□ -1.08
DEPDC4-205ENST00000548313 DNMT3AQ9Y6K1 912 aaPredicted RBP8.31□□□□□ -1.08
DEPDC4-205ENST00000548313 SLC35F4A4IF30 521 aa8.3□□□□□ -1.08
DEPDC4-205ENST00000548313 ARID3CA6NKF2 412 aa8.3□□□□□ -1.08
DEPDC4-205ENST00000548313 LZTS3O60299 673 aaPredicted RBP8.3□□□□□ -1.08
DEPDC4-205ENST00000548313 PPP1R26Q5T8A7 1209 aaPredicted RBP8.3□□□□□ -1.08
DEPDC4-205ENST00000548313 KANK3Q6NY19 840 aa8.3□□□□□ -1.08
DEPDC4-205ENST00000548313 SERPINA10Q9UK55 444 aa8.3□□□□□ -1.08
DEPDC4-205ENST00000548313 SUPT5HO00267 1087 aaKnown RBP8.29□□□□□ -1.08
DEPDC4-205ENST00000548313 MARSP56192 900 aaKnown RBP8.29□□□□□ -1.08
DEPDC4-205ENST00000548313 FOXK2Q01167 660 aa8.29□□□□□ -1.08
DEPDC4-205ENST00000548313 RNFT1Q5M7Z0 435 aa8.29□□□□□ -1.08
DEPDC4-205ENST00000548313 SV2AQ7L0J3 742 aa8.29□□□□□ -1.08
DEPDC4-205ENST00000548313 ERVH48-1M5A8F1 160 aa8.28□□□□□ -1.08
DEPDC4-205ENST00000548313 ITGA6P23229 1130 aa8.28□□□□□ -1.08
DEPDC4-205ENST00000548313 VWA5B2Q8N398 1253 aa8.28□□□□□ -1.08
DEPDC4-205ENST00000548313 CCDC97Q96F63 343 aaPredicted RBP8.28□□□□□ -1.08
DEPDC4-205ENST00000548313 UCN2Q96RP3 112 aa8.28□□□□□ -1.08
DEPDC4-205ENST00000548313 ATP9BO43861 1147 aa8.27□□□□□ -1.09
DEPDC4-205ENST00000548313 ARHGEF15O94989 841 aa8.27□□□□□ -1.09
DEPDC4-205ENST00000548313 SKIP12755 728 aa8.27□□□□□ -1.09
DEPDC4-205ENST00000548313 IRS1P35568 1242 aa8.27□□□□□ -1.09
DEPDC4-205ENST00000548313 RAB15P59190 212 aa8.27□□□□□ -1.09
DEPDC4-205ENST00000548313 CBLBQ13191 982 aa8.27□□□□□ -1.09
DEPDC4-205ENST00000548313 GPAT2Q6NUI2 795 aa8.27□□□□□ -1.09
DEPDC4-205ENST00000548313 PLPP7Q8NBV4 271 aa8.27□□□□□ -1.09
DEPDC4-205ENST00000548313 SIRT1Q96EB6 747 aa8.27□□□□□ -1.09
DEPDC4-205ENST00000548313 SCARF2Q96GP6 870 aaPredicted RBP8.27□□□□□ -1.09
DEPDC4-205ENST00000548313 CCDC85AQ96PX6 553 aaPredicted RBP8.27□□□□□ -1.09
DEPDC4-205ENST00000548313 PPP1R12CQ9BZL4 782 aa8.27□□□□□ -1.09
DEPDC4-205ENST00000548313 C1orf115Q9H7X2 142 aa8.27□□□□□ -1.09
DEPDC4-205ENST00000548313 CDC14CA4D256 554 aa8.26□□□□□ -1.09
DEPDC4-205ENST00000548313 PALM3A6NDB9 673 aaPredicted RBP8.26□□□□□ -1.09
DEPDC4-205ENST00000548313 PIK3CDO00329 1044 aa8.26□□□□□ -1.09
DEPDC4-205ENST00000548313 USP4Q13107 963 aa8.26□□□□□ -1.09
DEPDC4-205ENST00000548313 TBC1D9Q6ZT07 1266 aa8.26□□□□□ -1.09
DEPDC4-205ENST00000548313 TFIP11Q9UBB9 837 aaKnown RBP8.26□□□□□ -1.09
DEPDC4-205ENST00000548313 DOLKQ9UPQ8 538 aa8.26□□□□□ -1.09
DEPDC4-205ENST00000548313 PCDHB11Q9Y5F2 797 aa8.26□□□□□ -1.09
DEPDC4-205ENST00000548313 PLEKHM2Q8IWE5 1019 aa8.25□□□□□ -1.09
DEPDC4-205ENST00000548313 WHAMMQ8TF30 809 aa8.25□□□□□ -1.09
DEPDC4-205ENST00000548313 ERVK-9P63128 1117 aa8.24□□□□□ -1.09
DEPDC4-205ENST00000548313 TSGA10IPQ3SY00 556 aa8.24□□□□□ -1.09
DEPDC4-205ENST00000548313 ESF1Q9H501 851 aaKnown RBP8.24□□□□□ -1.09
DEPDC4-205ENST00000548313 USP17L5A8MUK1 530 aa8.23□□□□□ -1.09
DEPDC4-205ENST00000548313 MYCP01106 439 aaPredicted RBP8.23□□□□□ -1.09
DEPDC4-205ENST00000548313 EML3Q32P44 896 aa8.23□□□□□ -1.09
DEPDC4-205ENST00000548313 CC2D2BQ6DHV5 1058 aa8.23□□□□□ -1.09
DEPDC4-205ENST00000548313 CCDC82Q8N4S0 544 aa8.23□□□□□ -1.09
DEPDC4-205ENST00000548313 ZNF784Q8NCA9 323 aaPredicted RBP8.23□□□□□ -1.09
DEPDC4-205ENST00000548313 TMPRSS4Q9NRS4 437 aa8.23□□□□□ -1.09
DEPDC4-205ENST00000548313 MAFBQ9Y5Q3 323 aaPredicted RBP8.23□□□□□ -1.09
DEPDC4-205ENST00000548313 LILRA1O75019 489 aa8.22□□□□□ -1.09
DEPDC4-205ENST00000548313 CTSOP43234 321 aaPredicted RBP8.22□□□□□ -1.09
DEPDC4-205ENST00000548313 MAP3K10Q02779 954 aa8.22□□□□□ -1.09
DEPDC4-205ENST00000548313 CDCA7Q9BWT1 371 aaPredicted RBP8.22□□□□□ -1.09
DEPDC4-205ENST00000548313 USP17L3A6NCW0 530 aa8.21□□□□□ -1.1
DEPDC4-205ENST00000548313 USP17L4A6NCW7 530 aa8.21□□□□□ -1.1
DEPDC4-205ENST00000548313 ADAMTS2O95450 1211 aa8.21□□□□□ -1.1
DEPDC4-205ENST00000548313 RELBQ01201 579 aa8.21□□□□□ -1.1
DEPDC4-205ENST00000548313 SRSF11Q05519 484 aaKnown RBP8.21□□□□□ -1.1
DEPDC4-205ENST00000548313 CFAP70Q5T0N1 1121 aa8.21□□□□□ -1.1
DEPDC4-205ENST00000548313 USP17L2Q6R6M4 530 aa8.21□□□□□ -1.1
DEPDC4-205ENST00000548313 USP17L1Q7RTZ2 530 aa8.21□□□□□ -1.1
DEPDC4-205ENST00000548313 AGBL1Q96MI9 1066 aa8.21□□□□□ -1.1
DEPDC4-205ENST00000548313 INSM2Q96T92 566 aaPredicted RBP8.21□□□□□ -1.1
DEPDC4-205ENST00000548313 POLMQ9NP87 494 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms