RNA–Protein interactions for RNA: ENST00000548123.1

RDH5-205, Transcript of retinol dehydrogenase 5, humanhuman

TSL 3

Gene RDH5, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH5-205ENST00000548123 SOCS7O14512 581 aa20.17■□□□□ 0.82
RDH5-205ENST00000548123 FAM182BQ5T319 152 aa20.17■□□□□ 0.82
RDH5-205ENST00000548123 MARCH10Q8NA82 808 aaPredicted RBP20.17■□□□□ 0.82
RDH5-205ENST00000548123 ZCRB1Q8TBF4 217 aaKnown RBP20.17■□□□□ 0.82
RDH5-205ENST00000548123 SBF2Q86WG5 1849 aa20.17■□□□□ 0.82
RDH5-205ENST00000548123 SULT6B1Q6IMI4 303 aa20.16■□□□□ 0.82
RDH5-205ENST00000548123 FAM196AQ6ZSG2 479 aa20.16■□□□□ 0.82
RDH5-205ENST00000548123 AEBP1Q8IUX7 1158 aa20.16■□□□□ 0.82
RDH5-205ENST00000548123 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.15■□□□□ 0.82
RDH5-205ENST00000548123 NUDCQ9Y266 331 aa20.15■□□□□ 0.82
RDH5-205ENST00000548123 BCL9O00512 1426 aa20.15■□□□□ 0.82
RDH5-205ENST00000548123 U2SURPO15042 1029 aaKnown RBP20.13■□□□□ 0.81
RDH5-205ENST00000548123 ANP32CO43423 234 aa20.13■□□□□ 0.81
RDH5-205ENST00000548123 UPF1Q92900 1129 aaKnown RBP eCLIP20.13■□□□□ 0.81
RDH5-205ENST00000548123 HMOX1P09601 288 aa20.12■□□□□ 0.81
RDH5-205ENST00000548123 PCDH11XQ9BZA7 1347 aa20.11■□□□□ 0.81
RDH5-205ENST00000548123 PCDH11YQ9BZA8 1340 aa20.11■□□□□ 0.81
RDH5-205ENST00000548123 DDX54Q8TDD1 881 aaKnown RBP20.11■□□□□ 0.81
RDH5-205ENST00000548123 SPG7Q9UQ90 795 aa20.11■□□□□ 0.81
RDH5-205ENST00000548123 AMOTQ4VCS5 1084 aa20.09■□□□□ 0.81
RDH5-205ENST00000548123 PLEKHO1Q53GL0 409 aaPredicted RBP20.09■□□□□ 0.81
RDH5-205ENST00000548123 CCDC125Q86Z20 511 aa20.09■□□□□ 0.81
RDH5-205ENST00000548123 CYP27B1O15528 508 aa20.08■□□□□ 0.81
RDH5-205ENST00000548123 U2AF1L5P0DN76 240 aaPredicted RBP20.08■□□□□ 0.81
RDH5-205ENST00000548123 U2AF1Q01081 240 aaKnown RBP eCLIP20.08■□□□□ 0.81
RDH5-205ENST00000548123 TNS1Q9HBL0 1735 aaKnown RBP20.07■□□□□ 0.8
RDH5-205ENST00000548123 FCHSD2O94868 740 aa20.06■□□□□ 0.8
RDH5-205ENST00000548123 RSPH6AQ9H0K4 717 aa20.06■□□□□ 0.8
RDH5-205ENST00000548123 NHSQ6T4R5 1651 aa20.06■□□□□ 0.8
RDH5-205ENST00000548123 TRIM37O94972 964 aa20.05■□□□□ 0.8
RDH5-205ENST00000548123 IFNL2Q8IZJ0 200 aa20.05■□□□□ 0.8
RDH5-205ENST00000548123 DOT1LQ8TEK3 1739 aa20.05■□□□□ 0.8
RDH5-205ENST00000548123 PHKG2P15735 406 aa20.04■□□□□ 0.8
RDH5-205ENST00000548123 NKX1-1Q15270 411 aaPredicted RBP20.04■□□□□ 0.8
RDH5-205ENST00000548123 PRKAR2BP31323 418 aa20.03■□□□□ 0.8
RDH5-205ENST00000548123 ZNF530Q6P9A1 599 aaPredicted RBP20.03■□□□□ 0.8
RDH5-205ENST00000548123 ITGB4P16144 1822 aa20.02■□□□□ 0.8
RDH5-205ENST00000548123 VIRMAQ69YN4 1812 aaKnown RBP20.02■□□□□ 0.8
RDH5-205ENST00000548123 SF3B2Q13435 895 aaKnown RBP20.02■□□□□ 0.8
RDH5-205ENST00000548123 BCL11BQ9C0K0 894 aaPredicted RBP20.02■□□□□ 0.8
RDH5-205ENST00000548123 TOGARAM1Q9Y4F4 1720 aa20.02■□□□□ 0.79
RDH5-205ENST00000548123 ACSBG1Q96GR2 724 aa20.01■□□□□ 0.79
RDH5-205ENST00000548123 BTAF1O14981 1849 aa20■□□□□ 0.79
RDH5-205ENST00000548123 MTHFSDQ2M296 383 aaKnown RBP20■□□□□ 0.79
RDH5-205ENST00000548123 C1orf141Q5JVX7 400 aa20■□□□□ 0.79
RDH5-205ENST00000548123 SCN11AQ9UI33 1791 aa19.99■□□□□ 0.79
RDH5-205ENST00000548123 KCNQ2O43526 872 aa19.99■□□□□ 0.79
RDH5-205ENST00000548123 HSP90AB1P08238 724 aaKnown RBP19.99■□□□□ 0.79
RDH5-205ENST00000548123 CCDC184Q52MB2 194 aa19.99■□□□□ 0.79
RDH5-205ENST00000548123 PTF1AQ7RTS3 328 aa19.99■□□□□ 0.79
RDH5-205ENST00000548123 PHACTR3Q96KR7 559 aa19.99■□□□□ 0.79
RDH5-205ENST00000548123 PNNQ9H307 717 aaKnown RBP19.99■□□□□ 0.79
RDH5-205ENST00000548123 WDR43Q15061 677 aaKnown RBP eCLIP19.98■□□□□ 0.79
RDH5-205ENST00000548123 AKAP4Q5JQC9 854 aa19.98■□□□□ 0.79
RDH5-205ENST00000548123 GAS2L2Q8NHY3 880 aa19.98■□□□□ 0.79
RDH5-205ENST00000548123 BAG6P46379 1132 aa19.97■□□□□ 0.79
RDH5-205ENST00000548123 PRIM1P49642 420 aaKnown RBP19.97■□□□□ 0.79
RDH5-205ENST00000548123 DCAF5Q96JK2 942 aa19.97■□□□□ 0.79
RDH5-205ENST00000548123 PLEKHF1Q96S99 279 aa19.97■□□□□ 0.79
RDH5-205ENST00000548123 RGPD3A6NKT7 1758 aaPredicted RBP19.97■□□□□ 0.79
RDH5-205ENST00000548123 RGPD4Q7Z3J3 1758 aa19.97■□□□□ 0.79
RDH5-205ENST00000548123 KDM6AO15550 1401 aaPredicted RBP19.96■□□□□ 0.79
RDH5-205ENST00000548123 APBA3O96018 575 aa19.96■□□□□ 0.79
RDH5-205ENST00000548123 ADAMTS7Q9UKP4 1686 aa19.96■□□□□ 0.79
RDH5-205ENST00000548123 DLG5Q8TDM6 1919 aa19.96■□□□□ 0.79
RDH5-205ENST00000548123 DIEXFQ68CQ4 756 aaKnown RBP19.95■□□□□ 0.78
RDH5-205ENST00000548123 DEFB132Q7Z7B7 95 aa19.95■□□□□ 0.78
RDH5-205ENST00000548123 MRS2Q9HD23 443 aa19.95■□□□□ 0.78
RDH5-205ENST00000548123 ERVV-2B6SEH9 535 aa19.94■□□□□ 0.78
RDH5-205ENST00000548123 PLSCR1O15162 318 aa19.94■□□□□ 0.78
RDH5-205ENST00000548123 NEFMP07197 916 aa19.94■□□□□ 0.78
RDH5-205ENST00000548123 SYTL4Q96C24 671 aaPredicted RBP19.94■□□□□ 0.78
RDH5-205ENST00000548123 ADAMTS8Q9UP79 889 aa19.94■□□□□ 0.78
RDH5-205ENST00000548123 MPRIPQ6WCQ1 1025 aa19.93■□□□□ 0.78
RDH5-205ENST00000548123 MAP3K5Q99683 1374 aa19.93■□□□□ 0.78
RDH5-205ENST00000548123 EN1Q05925 392 aaPredicted RBP19.92■□□□□ 0.78
RDH5-205ENST00000548123 PNISRQ8TF01 805 aaKnown RBP19.92■□□□□ 0.78
RDH5-205ENST00000548123 CAMKK2Q96RR4 588 aa19.92■□□□□ 0.78
RDH5-205ENST00000548123 GNAT3A8MTJ3 354 aa19.91■□□□□ 0.78
RDH5-205ENST00000548123 MAPK8IP3Q9UPT6 1336 aa19.91■□□□□ 0.78
RDH5-205ENST00000548123 RNMTO43148 476 aaKnown RBP19.9■□□□□ 0.78
RDH5-205ENST00000548123 RREB1Q92766 1687 aa19.9■□□□□ 0.78
RDH5-205ENST00000548123 LY75O60449 1722 aa19.89■□□□□ 0.77
RDH5-205ENST00000548123 MRC1P22897 1456 aa19.89■□□□□ 0.77
RDH5-205ENST00000548123 PIGBQ92521 554 aa19.89■□□□□ 0.77
RDH5-205ENST00000548123 RUNDC1Q96C34 613 aa19.89■□□□□ 0.77
RDH5-205ENST00000548123 LGR6Q9HBX8 967 aa19.89■□□□□ 0.77
RDH5-205ENST00000548123 TMOD3Q9NYL9 352 aa19.89■□□□□ 0.77
RDH5-205ENST00000548123 EZH2Q15910 746 aaKnown RBP19.88■□□□□ 0.77
RDH5-205ENST00000548123 NFE2L2Q16236 605 aa19.88■□□□□ 0.77
RDH5-205ENST00000548123 HTATSF1O43719 755 aaKnown RBP19.87■□□□□ 0.77
RDH5-205ENST00000548123 CABP4P57796 275 aa19.87■□□□□ 0.77
RDH5-205ENST00000548123 CCDC146Q8IYE0 955 aa19.87■□□□□ 0.77
RDH5-205ENST00000548123 IL17REQ8NFR9 667 aa19.87■□□□□ 0.77
RDH5-205ENST00000548123 SIPA1L3O60292 1781 aaPredicted RBP19.87■□□□□ 0.77
RDH5-205ENST00000548123 CEMIPQ8WUJ3 1361 aa19.86■□□□□ 0.77
RDH5-205ENST00000548123 CCER2I3L3R5 266 aa19.86■□□□□ 0.77
RDH5-205ENST00000548123 NUP188Q5SRE5 1749 aa19.85■□□□□ 0.77
RDH5-205ENST00000548123 PROM2Q8N271 834 aa19.85■□□□□ 0.77
RDH5-205ENST00000548123 NFATC2IPQ8NCF5 419 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms