RNA–Protein interactions for RNA: ENST00000548069.5

FGD6-204, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

TSL 3

Gene FGD6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-204ENST00000548069 POM121CA8CG34 1229 aa11.27□□□□□ -0.61
FGD6-204ENST00000548069 GMPRP36959 345 aa11.27□□□□□ -0.61
FGD6-204ENST00000548069 WASHC4Q2M389 1173 aa11.27□□□□□ -0.61
FGD6-204ENST00000548069 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.27□□□□□ -0.61
FGD6-204ENST00000548069 POLMQ9NP87 494 aaPredicted RBP11.27□□□□□ -0.61
FGD6-204ENST00000548069 PPFIA3O75145 1194 aa11.26□□□□□ -0.61
FGD6-204ENST00000548069 KDF1Q8NAX2 398 aaPredicted RBP11.26□□□□□ -0.61
FGD6-204ENST00000548069 PTGIRP43119 386 aa11.25□□□□□ -0.61
FGD6-204ENST00000548069 MCCD1P59942 119 aaPredicted RBP11.25□□□□□ -0.61
FGD6-204ENST00000548069 PTSQ03393 145 aa11.24□□□□□ -0.61
FGD6-204ENST00000548069 RNF20Q5VTR2 975 aa11.24□□□□□ -0.61
FGD6-204ENST00000548069 CCDC97Q96F63 343 aaPredicted RBP11.24□□□□□ -0.61
FGD6-204ENST00000548069 VAC14Q08AM6 782 aa11.23□□□□□ -0.61
FGD6-204ENST00000548069 HOMEZQ8IX15 550 aa11.23□□□□□ -0.61
FGD6-204ENST00000548069 INSM1Q01101 510 aaPredicted RBP11.22□□□□□ -0.61
FGD6-204ENST00000548069 ZNF592Q92610 1267 aa11.22□□□□□ -0.61
FGD6-204ENST00000548069 GLMNQ92990 594 aa11.22□□□□□ -0.61
FGD6-204ENST00000548069 CALR3Q96L12 384 aaKnown RBP11.22□□□□□ -0.61
FGD6-204ENST00000548069 SERPINA10Q9UK55 444 aa11.22□□□□□ -0.61
FGD6-204ENST00000548069 PCDHB11Q9Y5F2 797 aa11.22□□□□□ -0.61
FGD6-204ENST00000548069 ATP5J2-PTCD1G3V325 749 aa11.2□□□□□ -0.62
FGD6-204ENST00000548069 SCTRP47872 440 aa11.2□□□□□ -0.62
FGD6-204ENST00000548069 FOXD4L5Q5VV16 416 aaPredicted RBP11.2□□□□□ -0.62
FGD6-204ENST00000548069 CC2D2BQ6DHV5 1058 aa11.2□□□□□ -0.62
FGD6-204ENST00000548069 RNF217Q8TC41 542 aa11.2□□□□□ -0.62
FGD6-204ENST00000548069 TRIM52Q96A61 297 aa11.2□□□□□ -0.62
FGD6-204ENST00000548069 CEP126Q9P2H0 1117 aa11.2□□□□□ -0.62
FGD6-204ENST00000548069 ERVK-9P63128 1117 aa11.19□□□□□ -0.62
FGD6-204ENST00000548069 HDGFL1Q5TGJ6 251 aa11.18□□□□□ -0.62
FGD6-204ENST00000548069 CCDC125Q86Z20 511 aa11.18□□□□□ -0.62
FGD6-204ENST00000548069 ADAMTS19Q8TE59 1207 aa11.18□□□□□ -0.62
FGD6-204ENST00000548069 MEN1O00255 615 aa11.17□□□□□ -0.62
FGD6-204ENST00000548069 CCDC155Q8N6L0 562 aa11.17□□□□□ -0.62
FGD6-204ENST00000548069 VSIG8P0DPA2 414 aa11.16□□□□□ -0.62
FGD6-204ENST00000548069 EIF4G2P78344 907 aaKnown RBP eCLIP11.16□□□□□ -0.62
FGD6-204ENST00000548069 CCDC85AQ96PX6 553 aaPredicted RBP11.16□□□□□ -0.62
FGD6-204ENST00000548069 CDCA7Q9BWT1 371 aaPredicted RBP11.16□□□□□ -0.62
FGD6-204ENST00000548069 ESF1Q9H501 851 aaKnown RBP11.16□□□□□ -0.62
FGD6-204ENST00000548069 A0A1W2PRU2 124 aa11.15□□□□□ -0.62
FGD6-204ENST00000548069 SLC35F4A4IF30 521 aa11.15□□□□□ -0.62
FGD6-204ENST00000548069 SOX11P35716 441 aa11.15□□□□□ -0.62
FGD6-204ENST00000548069 PRICKLE2Q7Z3G6 844 aa11.15□□□□□ -0.62
FGD6-204ENST00000548069 TSGA10IPQ3SY00 556 aa11.14□□□□□ -0.63
FGD6-204ENST00000548069 LYSMD3Q7Z3D4 306 aa11.14□□□□□ -0.63
FGD6-204ENST00000548069 OSBPL3Q9H4L5 887 aa11.14□□□□□ -0.63
FGD6-204ENST00000548069 ALG2Q9H553 416 aa11.14□□□□□ -0.63
FGD6-204ENST00000548069 RHOQP17081 205 aa11.13□□□□□ -0.63
FGD6-204ENST00000548069 GPR161Q8N6U8 529 aaKnown RBP11.13□□□□□ -0.63
FGD6-204ENST00000548069 RNF144AP50876 292 aaPredicted RBP11.12□□□□□ -0.63
FGD6-204ENST00000548069 CYP2U1Q7Z449 544 aa11.12□□□□□ -0.63
FGD6-204ENST00000548069 SENP3-EIF4A1A0A087X0R7 540 aa11.11□□□□□ -0.63
FGD6-204ENST00000548069 SEMA3FQ13275 785 aa11.11□□□□□ -0.63
FGD6-204ENST00000548069 SLFNL1Q499Z3 407 aa11.11□□□□□ -0.63
FGD6-204ENST00000548069 NLRP3Q96P20 1036 aa11.11□□□□□ -0.63
FGD6-204ENST00000548069 ARHGEF10LQ9HCE6 1279 aa11.11□□□□□ -0.63
FGD6-204ENST00000548069 RAB6BQ9NRW1 208 aa11.11□□□□□ -0.63
FGD6-204ENST00000548069 STK17AQ9UEE5 414 aa11.11□□□□□ -0.63
FGD6-204ENST00000548069 CDC14CA4D256 554 aa11.1□□□□□ -0.63
FGD6-204ENST00000548069 ITGA6P23229 1130 aa11.1□□□□□ -0.63
FGD6-204ENST00000548069 ZSCAN1Q8NBB4 408 aa11.1□□□□□ -0.63
FGD6-204ENST00000548069 MYCP01106 439 aaPredicted RBP11.09□□□□□ -0.63
FGD6-204ENST00000548069 LORP23490 312 aaPredicted RBP11.09□□□□□ -0.63
FGD6-204ENST00000548069 RNF135Q8IUD6 432 aa11.09□□□□□ -0.63
FGD6-204ENST00000548069 VWA5B2Q8N398 1253 aa11.09□□□□□ -0.63
FGD6-204ENST00000548069 PHTF2Q8N3S3 785 aa11.09□□□□□ -0.63
FGD6-204ENST00000548069 SLC27A3Q5K4L6 730 aa11.08□□□□□ -0.64
FGD6-204ENST00000548069 DOLKQ9UPQ8 538 aa11.08□□□□□ -0.64
FGD6-204ENST00000548069 CLN3Q13286 438 aa11.07□□□□□ -0.64
FGD6-204ENST00000548069 GPC1P35052 558 aa11.06□□□□□ -0.64
FGD6-204ENST00000548069 POU4F2Q12837 409 aa11.06□□□□□ -0.64
FGD6-204ENST00000548069 OXLD1Q5BKU9 147 aa11.06□□□□□ -0.64
FGD6-204ENST00000548069 NANOS1Q8WY41 292 aaKnown RBP11.06□□□□□ -0.64
FGD6-204ENST00000548069 CNTNAP3BQ96NU0 1288 aa11.06□□□□□ -0.64
FGD6-204ENST00000548069 CNTNAP3Q9BZ76 1288 aa11.06□□□□□ -0.64
FGD6-204ENST00000548069 KRT76Q01546 638 aa11.05□□□□□ -0.64
FGD6-204ENST00000548069 SV2AQ7L0J3 742 aa11.05□□□□□ -0.64
FGD6-204ENST00000548069 UCN2Q96RP3 112 aa11.05□□□□□ -0.64
FGD6-204ENST00000548069 GNRH1P01148 92 aa11.04□□□□□ -0.64
FGD6-204ENST00000548069 CNKSR1Q969H4 720 aa11.04□□□□□ -0.64
FGD6-204ENST00000548069 COL25A1Q9BXS0 654 aaPredicted RBP11.04□□□□□ -0.64
FGD6-204ENST00000548069 PPP1R12CQ9BZL4 782 aa11.04□□□□□ -0.64
FGD6-204ENST00000548069 GRIP2Q9C0E4 1043 aa11.04□□□□□ -0.64
FGD6-204ENST00000548069 IL2RAP01589 272 aa11.03□□□□□ -0.64
FGD6-204ENST00000548069 USP4Q13107 963 aa11.03□□□□□ -0.64
FGD6-204ENST00000548069 CUEDC1Q9NWM3 386 aaPredicted RBP11.03□□□□□ -0.64
FGD6-204ENST00000548069 STAU1O95793 577 aaKnown RBP11.02□□□□□ -0.65
FGD6-204ENST00000548069 CFAP70Q5T0N1 1121 aa11.02□□□□□ -0.65
FGD6-204ENST00000548069 PALM3A6NDB9 673 aaPredicted RBP11.01□□□□□ -0.65
FGD6-204ENST00000548069 FAM181BA6NEQ2 426 aa11.01□□□□□ -0.65
FGD6-204ENST00000548069 CENPCQ03188 943 aa11.01□□□□□ -0.65
FGD6-204ENST00000548069 RNFT1Q5M7Z0 435 aa11.01□□□□□ -0.65
FGD6-204ENST00000548069 GAS2L1Q99501 681 aaPredicted RBP11.01□□□□□ -0.65
FGD6-204ENST00000548069 ESYT1Q9BSJ8 1104 aa11.01□□□□□ -0.65
FGD6-204ENST00000548069 RFX1P22670 979 aa11□□□□□ -0.65
FGD6-204ENST00000548069 NBPF10Q6P3W6 841 aaKnown RBP11□□□□□ -0.65
FGD6-204ENST00000548069 RIPOR1Q6ZS17 1223 aa11□□□□□ -0.65
FGD6-204ENST00000548069 NBPF15Q8N660 670 aa11□□□□□ -0.65
FGD6-204ENST00000548069 TFIP11Q9UBB9 837 aaKnown RBP11□□□□□ -0.65
FGD6-204ENST00000548069 CHIC2Q9UKJ5 165 aa11□□□□□ -0.65
FGD6-204ENST00000548069 TBC1D9Q6ZT07 1266 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms