RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 PDE3BQ13370 1112 aa15.28■□□□□ 0.04
CALCOCO1-208ENST00000547988 DOT1LQ8TEK3 1739 aa15.28■□□□□ 0.04
CALCOCO1-208ENST00000547988 EXOC5O00471 708 aa15.27■□□□□ 0.04
CALCOCO1-208ENST00000547988 ANP32CO43423 234 aa15.27■□□□□ 0.04
CALCOCO1-208ENST00000547988 TATP17735 454 aaPredicted RBP15.27■□□□□ 0.04
CALCOCO1-208ENST00000547988 ITGB4P16144 1822 aa15.27■□□□□ 0.03
CALCOCO1-208ENST00000547988 NHSQ6T4R5 1651 aa15.26■□□□□ 0.03
CALCOCO1-208ENST00000547988 NUDCQ9Y266 331 aa15.26■□□□□ 0.03
CALCOCO1-208ENST00000547988 DLG5Q8TDM6 1919 aa15.25■□□□□ 0.03
CALCOCO1-208ENST00000547988 SULT6B1Q6IMI4 303 aa15.25■□□□□ 0.03
CALCOCO1-208ENST00000547988 SCN11AQ9UI33 1791 aa15.25■□□□□ 0.03
CALCOCO1-208ENST00000547988 BCL9O00512 1426 aa15.25■□□□□ 0.03
CALCOCO1-208ENST00000547988 ZCRB1Q8TBF4 217 aaKnown RBP15.24■□□□□ 0.03
CALCOCO1-208ENST00000547988 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.24■□□□□ 0.032e-8■■□□□ 13.8
CALCOCO1-208ENST00000547988 TOGARAM1Q9Y4F4 1720 aa15.23■□□□□ 0.03
CALCOCO1-208ENST00000547988 U2SURPO15042 1029 aaKnown RBP15.23■□□□□ 0.03
CALCOCO1-208ENST00000547988 AEBP1Q8IUX7 1158 aa15.23■□□□□ 0.03
CALCOCO1-208ENST00000547988 BTAF1O14981 1849 aa15.22■□□□□ 0.03
CALCOCO1-208ENST00000547988 PCDH11XQ9BZA7 1347 aa15.22■□□□□ 0.03
CALCOCO1-208ENST00000547988 PCDH11YQ9BZA8 1340 aa15.22■□□□□ 0.03
CALCOCO1-208ENST00000547988 RGPD3A6NKT7 1758 aaPredicted RBP15.22■□□□□ 0.03
CALCOCO1-208ENST00000547988 RGPD4Q7Z3J3 1758 aa15.22■□□□□ 0.03
CALCOCO1-208ENST00000547988 FAM196AQ6ZSG2 479 aa15.22■□□□□ 0.03
CALCOCO1-208ENST00000547988 MARCH10Q8NA82 808 aaPredicted RBP15.22■□□□□ 0.03
CALCOCO1-208ENST00000547988 SPG7Q9UQ90 795 aa15.22■□□□□ 0.03
CALCOCO1-208ENST00000547988 HMOX1P09601 288 aa15.21■□□□□ 0.03
CALCOCO1-208ENST00000547988 U2AF1L5P0DN76 240 aaPredicted RBP15.2■□□□□ 0.02
CALCOCO1-208ENST00000547988 U2AF1Q01081 240 aaKnown RBP eCLIP15.2■□□□□ 0.02
CALCOCO1-208ENST00000547988 AMOTQ4VCS5 1084 aa15.2■□□□□ 0.02
CALCOCO1-208ENST00000547988 FAM182BQ5T319 152 aa15.2■□□□□ 0.02
CALCOCO1-208ENST00000547988 ADAMTS7Q9UKP4 1686 aa15.19■□□□□ 0.02
CALCOCO1-208ENST00000547988 PLEKHO1Q53GL0 409 aaPredicted RBP15.19■□□□□ 0.02
CALCOCO1-208ENST00000547988 DDX54Q8TDD1 881 aaKnown RBP15.19■□□□□ 0.02
CALCOCO1-208ENST00000547988 SOCS7O14512 581 aa15.18■□□□□ 0.02
CALCOCO1-208ENST00000547988 FCHSD2O94868 740 aa15.18■□□□□ 0.02
CALCOCO1-208ENST00000547988 RSPH6AQ9H0K4 717 aa15.18■□□□□ 0.02
CALCOCO1-208ENST00000547988 CCDC125Q86Z20 511 aa15.17■□□□□ 0.02
CALCOCO1-208ENST00000547988 SIPA1L3O60292 1781 aaPredicted RBP15.16■□□□□ 0.02
CALCOCO1-208ENST00000547988 CYP27B1O15528 508 aa15.16■□□□□ 0.02
CALCOCO1-208ENST00000547988 IFNL2Q8IZJ0 200 aa15.16■□□□□ 0.02
CALCOCO1-208ENST00000547988 UPF1Q92900 1129 aaKnown RBP eCLIP15.16■□□□□ 0.02
CALCOCO1-208ENST00000547988 PNNQ9H307 717 aaKnown RBP15.16■□□□□ 0.02
CALCOCO1-208ENST00000547988 LY75O60449 1722 aa15.15■□□□□ 0.02
CALCOCO1-208ENST00000547988 PHKG2P15735 406 aa15.15■□□□□ 0.02
CALCOCO1-208ENST00000547988 PRKAR2BP31323 418 aa15.15■□□□□ 0.02
CALCOCO1-208ENST00000547988 WDR43Q15061 677 aaKnown RBP eCLIP15.15■□□□□ 0.02
CALCOCO1-208ENST00000547988 NKX1-1Q15270 411 aaPredicted RBP15.15■□□□□ 0.02
CALCOCO1-208ENST00000547988 RREB1Q92766 1687 aa15.15■□□□□ 0.02
CALCOCO1-208ENST00000547988 HSP90AB1P08238 724 aaKnown RBP15.14■□□□□ 0.01
CALCOCO1-208ENST00000547988 C1orf141Q5JVX7 400 aa15.14■□□□□ 0.01
CALCOCO1-208ENST00000547988 DIEXFQ68CQ4 756 aaKnown RBP15.14■□□□□ 0.01
CALCOCO1-208ENST00000547988 ZNF530Q6P9A1 599 aaPredicted RBP15.14■□□□□ 0.01
CALCOCO1-208ENST00000547988 TRIM37O94972 964 aa15.13■□□□□ 0.01
CALCOCO1-208ENST00000547988 NEFMP07197 916 aa15.13■□□□□ 0.01
CALCOCO1-208ENST00000547988 SF3B2Q13435 895 aaKnown RBP15.13■□□□□ 0.01
CALCOCO1-208ENST00000547988 MTHFSDQ2M296 383 aaKnown RBP15.12■□□□□ 0.01
CALCOCO1-208ENST00000547988 AKAP4Q5JQC9 854 aa15.12■□□□□ 0.01
CALCOCO1-208ENST00000547988 GAS2L2Q8NHY3 880 aa15.12■□□□□ 0.01
CALCOCO1-208ENST00000547988 BCL11BQ9C0K0 894 aaPredicted RBP15.12■□□□□ 0.01
CALCOCO1-208ENST00000547988 MRS2Q9HD23 443 aa15.12■□□□□ 0.01
CALCOCO1-208ENST00000547988 KDM6AO15550 1401 aaPredicted RBP15.11■□□□□ 0.01
CALCOCO1-208ENST00000547988 CCDC184Q52MB2 194 aa15.11■□□□□ 0.01
CALCOCO1-208ENST00000547988 PLEKHF1Q96S99 279 aa15.11■□□□□ 0.01
CALCOCO1-208ENST00000547988 MRC1P22897 1456 aa15.11■□□□□ 0.01
CALCOCO1-208ENST00000547988 NUP188Q5SRE5 1749 aa15.11■□□□□ 0.01
CALCOCO1-208ENST00000547988 PAPPAQ13219 1627 aa15.1■□□□□ 0.01
CALCOCO1-208ENST00000547988 ACSBG1Q96GR2 724 aa15.1■□□□□ 0.01
CALCOCO1-208ENST00000547988 DCAF5Q96JK2 942 aa15.1■□□□□ 0.01
CALCOCO1-208ENST00000547988 PHACTR3Q96KR7 559 aa15.1■□□□□ 0.01
CALCOCO1-208ENST00000547988 MAPK8IP3Q9UPT6 1336 aa15.1■□□□□ 0.01
CALCOCO1-208ENST00000547988 TAF1LQ8IZX4 1826 aa15.1■□□□□ 0.01
CALCOCO1-208ENST00000547988 MAP3K5Q99683 1374 aa15.1■□□□□ 0.01
CALCOCO1-208ENST00000547988 BAG6P46379 1132 aa15.09■□□□□ 0.01
CALCOCO1-208ENST00000547988 ADAMTS8Q9UP79 889 aa15.09■□□□□ 0.01
CALCOCO1-208ENST00000547988 KCNQ2O43526 872 aa15.08■□□□□ 0
CALCOCO1-208ENST00000547988 PRIM1P49642 420 aaKnown RBP15.08■□□□□ 0
CALCOCO1-208ENST00000547988 ZNF831Q5JPB2 1677 aa15.08■□□□□ 0
CALCOCO1-208ENST00000547988 UBR2Q8IWV8 1755 aa15.08■□□□□ 0
CALCOCO1-208ENST00000547988 GNAT3A8MTJ3 354 aa15.07■□□□□ 0
CALCOCO1-208ENST00000547988 ERVV-2B6SEH9 535 aa15.07■□□□□ 0
CALCOCO1-208ENST00000547988 PNISRQ8TF01 805 aaKnown RBP15.07■□□□□ 0
CALCOCO1-208ENST00000547988 SYTL4Q96C24 671 aaPredicted RBP15.07■□□□□ 0
CALCOCO1-208ENST00000547988 CCER2I3L3R5 266 aa15.06■□□□□ 0
CALCOCO1-208ENST00000547988 APBA3O96018 575 aa15.06■□□□□ 0
CALCOCO1-208ENST00000547988 MPRIPQ6WCQ1 1025 aa15.06■□□□□ 0
CALCOCO1-208ENST00000547988 PTF1AQ7RTS3 328 aa15.06■□□□□ 0
CALCOCO1-208ENST00000547988 RUNDC1Q96C34 613 aa15.06■□□□□ 0
CALCOCO1-208ENST00000547988 C5P01031 1676 aa15.06■□□□□ 0
CALCOCO1-208ENST00000547988 PLSCR1O15162 318 aa15.05■□□□□ -0
CALCOCO1-208ENST00000547988 NFE2L2Q16236 605 aa15.05■□□□□ -0
CALCOCO1-208ENST00000547988 TMOD3Q9NYL9 352 aa15.05■□□□□ -0
CALCOCO1-208ENST00000547988 CICQ96RK0 1608 aaPredicted RBP15.05■□□□□ -0
CALCOCO1-208ENST00000547988 KDM3BQ7LBC6 1761 aa15.04■□□□□ -0
CALCOCO1-208ENST00000547988 CEMIPQ8WUJ3 1361 aa15.04■□□□□ -0
CALCOCO1-208ENST00000547988 RNMTO43148 476 aaKnown RBP15.04■□□□□ -0
CALCOCO1-208ENST00000547988 HTATSF1O43719 755 aaKnown RBP15.04■□□□□ -0
CALCOCO1-208ENST00000547988 CCDC146Q8IYE0 955 aa15.04■□□□□ -0
CALCOCO1-208ENST00000547988 CABP4P57796 275 aa15.03■□□□□ -0
CALCOCO1-208ENST00000547988 DEFB132Q7Z7B7 95 aa15.03■□□□□ -0
CALCOCO1-208ENST00000547988 COL5A3P25940 1745 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms