RNA–Protein interactions for RNA: ENST00000547693.5

CACNB3-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 477 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-206ENST00000547693 RRP7AQ9Y3A4 280 aaKnown RBP13.66□□□□□ -0.22
CACNB3-206ENST00000547693 CAMTA1Q9Y6Y1 1673 aa13.66□□□□□ -0.22
CACNB3-206ENST00000547693 HTATSF1O43719 755 aaKnown RBP13.65□□□□□ -0.22
CACNB3-206ENST00000547693 PLEKHG2Q9H7P9 1386 aa13.65□□□□□ -0.22
CACNB3-206ENST00000547693 LMO7Q8WWI1 1683 aa13.65□□□□□ -0.22
CACNB3-206ENST00000547693 COL5A2P05997 1499 aaPredicted RBP13.64□□□□□ -0.23
CACNB3-206ENST00000547693 SENP3-EIF4A1A0A087X0R7 540 aa13.64□□□□□ -0.23
CACNB3-206ENST00000547693 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.64□□□□□ -0.23
CACNB3-206ENST00000547693 SPG7Q9UQ90 795 aa13.64□□□□□ -0.23
CACNB3-206ENST00000547693 RGPD2P0DJD1 1756 aa13.63□□□□□ -0.23
CACNB3-206ENST00000547693 E9PSI1 815 aa13.63□□□□□ -0.23
CACNB3-206ENST00000547693 MTHFSDQ2M296 383 aaKnown RBP13.63□□□□□ -0.23
CACNB3-206ENST00000547693 CRB1P82279 1406 aa13.63□□□□□ -0.23
CACNB3-206ENST00000547693 NCAPD2Q15021 1401 aa13.63□□□□□ -0.23
CACNB3-206ENST00000547693 GNAT3A8MTJ3 354 aa13.62□□□□□ -0.23
CACNB3-206ENST00000547693 C1orf141Q5JVX7 400 aa13.62□□□□□ -0.23
CACNB3-206ENST00000547693 LARP1Q6PKG0 1096 aaKnown RBP13.62□□□□□ -0.23
CACNB3-206ENST00000547693 C8orf37Q96NL8 207 aa13.62□□□□□ -0.23
CACNB3-206ENST00000547693 MYH16Q9H6N6 1097 aa13.62□□□□□ -0.23
CACNB3-206ENST00000547693 IL16Q14005 1332 aa13.62□□□□□ -0.23
CACNB3-206ENST00000547693 ZNF521Q96K83 1311 aa13.62□□□□□ -0.23
CACNB3-206ENST00000547693 IL2RBP14784 551 aa13.61□□□□□ -0.23
CACNB3-206ENST00000547693 UNC5CLQ8IV45 518 aa13.61□□□□□ -0.23
CACNB3-206ENST00000547693 CDCA7Q9BWT1 371 aaPredicted RBP13.61□□□□□ -0.23
CACNB3-206ENST00000547693 TRIM35Q9UPQ4 493 aa13.61□□□□□ -0.23
CACNB3-206ENST00000547693 THRAP3Q9Y2W1 955 aaKnown RBP13.61□□□□□ -0.23
CACNB3-206ENST00000547693 SLFN5Q08AF3 891 aa13.6□□□□□ -0.23
CACNB3-206ENST00000547693 AKAP4Q5JQC9 854 aa13.6□□□□□ -0.23
CACNB3-206ENST00000547693 NWD2Q9ULI1 1742 aa13.6□□□□□ -0.23
CACNB3-206ENST00000547693 HSP90AB1P08238 724 aaKnown RBP13.59□□□□□ -0.23
CACNB3-206ENST00000547693 GNAI1P63096 354 aa13.59□□□□□ -0.23
CACNB3-206ENST00000547693 ZNF530Q6P9A1 599 aaPredicted RBP13.59□□□□□ -0.23
CACNB3-206ENST00000547693 FNBP4Q8N3X1 1017 aaPredicted RBP13.59□□□□□ -0.23
CACNB3-206ENST00000547693 QTRT2Q9H974 415 aaKnown RBP13.59□□□□□ -0.23
CACNB3-206ENST00000547693 CCDC9Q9Y3X0 531 aaKnown RBP13.59□□□□□ -0.23
CACNB3-206ENST00000547693 IFNL2Q8IZJ0 200 aa13.58□□□□□ -0.24
CACNB3-206ENST00000547693 ZCRB1Q8TBF4 217 aaKnown RBP13.58□□□□□ -0.24
CACNB3-206ENST00000547693 USP21Q9UK80 565 aa13.58□□□□□ -0.24
CACNB3-206ENST00000547693 PLCH1Q4KWH8 1693 aa13.58□□□□□ -0.24
CACNB3-206ENST00000547693 DLG5Q8TDM6 1919 aa13.58□□□□□ -0.24
CACNB3-206ENST00000547693 CCDC125Q86Z20 511 aa13.57□□□□□ -0.24
CACNB3-206ENST00000547693 CDCA7LQ96GN5 454 aa13.57□□□□□ -0.24
CACNB3-206ENST00000547693 USP35Q9P2H5 1018 aa13.57□□□□□ -0.24
CACNB3-206ENST00000547693 SLIT2O94813 1529 aa13.57□□□□□ -0.24
CACNB3-206ENST00000547693 MAP3K5Q99683 1374 aa13.57□□□□□ -0.24
CACNB3-206ENST00000547693 VPS72Q15906 364 aa13.56□□□□□ -0.24
CACNB3-206ENST00000547693 TRMT2AQ8IZ69 625 aaKnown RBP13.56□□□□□ -0.24
CACNB3-206ENST00000547693 IFT57Q9NWB7 429 aa13.56□□□□□ -0.24
CACNB3-206ENST00000547693 EXOC5O00471 708 aa13.55□□□□□ -0.24
CACNB3-206ENST00000547693 CFAP44Q96MT7 982 aa13.55□□□□□ -0.24
CACNB3-206ENST00000547693 BABAM1Q9NWV8 329 aa13.55□□□□□ -0.24
CACNB3-206ENST00000547693 LAS1LQ9Y4W2 734 aaKnown RBP13.55□□□□□ -0.24
CACNB3-206ENST00000547693 SPATA31A1Q5TZJ5 1347 aa13.55□□□□□ -0.24
CACNB3-206ENST00000547693 SPATA31A5Q5VU36 1347 aa13.55□□□□□ -0.24
CACNB3-206ENST00000547693 SPATA31A7Q8IWB4 1347 aa13.55□□□□□ -0.24
CACNB3-206ENST00000547693 PCDH11XQ9BZA7 1347 aa13.55□□□□□ -0.24
CACNB3-206ENST00000547693 PCDH11YQ9BZA8 1340 aa13.55□□□□□ -0.24
CACNB3-206ENST00000547693 PARP4Q9UKK3 1724 aaKnown RBP13.55□□□□□ -0.24
CACNB3-206ENST00000547693 TEFQ10587 303 aa13.54□□□□□ -0.24
CACNB3-206ENST00000547693 TAF7Q15545 349 aaPredicted RBP13.54□□□□□ -0.24
CACNB3-206ENST00000547693 DUSP27Q5VZP5 1158 aa13.54□□□□□ -0.24
CACNB3-206ENST00000547693 BARGINQ6ZT62 677 aa13.54□□□□□ -0.24
CACNB3-206ENST00000547693 MCM10Q7L590 875 aa13.54□□□□□ -0.24
CACNB3-206ENST00000547693 OVOS2A0A0G2JMS6 1433 aa13.54□□□□□ -0.24
CACNB3-206ENST00000547693 ATRNO75882 1429 aa13.54□□□□□ -0.24
CACNB3-206ENST00000547693 CT47B1P0C2W7 299 aaPredicted RBP13.53□□□□□ -0.24
CACNB3-206ENST00000547693 PHKG2P15735 406 aa13.53□□□□□ -0.24
CACNB3-206ENST00000547693 DCTN1Q14203 1278 aa13.53□□□□□ -0.24
CACNB3-206ENST00000547693 DCAF5Q96JK2 942 aa13.53□□□□□ -0.24
CACNB3-206ENST00000547693 TRPC5Q9UL62 973 aaPredicted RBP13.53□□□□□ -0.24
CACNB3-206ENST00000547693 NRAPQ86VF7 1730 aa13.53□□□□□ -0.24
CACNB3-206ENST00000547693 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.53□□□□□ -0.24
CACNB3-206ENST00000547693 RNMTO43148 476 aaKnown RBP13.52□□□□□ -0.25
CACNB3-206ENST00000547693 IL17REQ8NFR9 667 aa13.52□□□□□ -0.25
CACNB3-206ENST00000547693 MEGF6O75095 1541 aa13.52□□□□□ -0.25
CACNB3-206ENST00000547693 BCL9LQ86UU0 1499 aa13.51□□□□□ -0.25
CACNB3-206ENST00000547693 ZNF853P0CG23 659 aa13.51□□□□□ -0.25
CACNB3-206ENST00000547693 MPRIPQ6WCQ1 1025 aa13.51□□□□□ -0.25
CACNB3-206ENST00000547693 DDX54Q8TDD1 881 aaKnown RBP13.51□□□□□ -0.25
CACNB3-206ENST00000547693 THUMPD2Q9BTF0 503 aaKnown RBP13.51□□□□□ -0.25
CACNB3-206ENST00000547693 CHMP4AQ9BY43 222 aa13.51□□□□□ -0.25
CACNB3-206ENST00000547693 SPINK5Q9NQ38 1064 aaPredicted RBP13.51□□□□□ -0.25
CACNB3-206ENST00000547693 CHL1O00533 1208 aa13.5□□□□□ -0.25
CACNB3-206ENST00000547693 DDB1Q16531 1140 aa13.5□□□□□ -0.25
CACNB3-206ENST00000547693 RCAN3Q9UKA8 241 aa13.5□□□□□ -0.25
CACNB3-206ENST00000547693 PKD1L3Q7Z443 1732 aa13.5□□□□□ -0.25
CACNB3-206ENST00000547693 ERVV-2B6SEH9 535 aa13.49□□□□□ -0.25
CACNB3-206ENST00000547693 CYP27B1O15528 508 aa13.49□□□□□ -0.25
CACNB3-206ENST00000547693 NKX1-1Q15270 411 aaPredicted RBP13.49□□□□□ -0.25
CACNB3-206ENST00000547693 GJD4Q96KN9 370 aaPredicted RBP13.49□□□□□ -0.25
CACNB3-206ENST00000547693 LGR6Q9HBX8 967 aa13.49□□□□□ -0.25
CACNB3-206ENST00000547693 TSPYL4Q9UJ04 414 aa13.49□□□□□ -0.25
CACNB3-206ENST00000547693 CEMIPQ8WUJ3 1361 aa13.48□□□□□ -0.25
CACNB3-206ENST00000547693 FANCIQ9NVI1 1328 aa13.48□□□□□ -0.25
CACNB3-206ENST00000547693 CABP4P57796 275 aa13.48□□□□□ -0.25
CACNB3-206ENST00000547693 ZNF428Q96B54 188 aa13.48□□□□□ -0.25
CACNB3-206ENST00000547693 MBIPQ9NS73 344 aa13.48□□□□□ -0.25
CACNB3-206ENST00000547693 DISP2A7MBM2 1401 aa13.47□□□□□ -0.25
CACNB3-206ENST00000547693 BTBD11A6QL63 1104 aa13.47□□□□□ -0.25
CACNB3-206ENST00000547693 NEFLP07196 543 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms