RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 MARSP56192 900 aaKnown RBP8.86□□□□□ -0.99
SCAF11-210ENST00000547654 MAP3K10Q02779 954 aa8.86□□□□□ -0.99
SCAF11-210ENST00000547654 SEPT12Q8IYM1 358 aa8.86□□□□□ -0.99
SCAF11-210ENST00000547654 IL27Q8NEV9 243 aa8.86□□□□□ -0.99
SCAF11-210ENST00000547654 ESPNB1AK53 854 aa8.85□□□□□ -0.99
SCAF11-210ENST00000547654 ADD1P35611 737 aaKnown RBP8.85□□□□□ -0.99
SCAF11-210ENST00000547654 ADAMTS2O95450 1211 aa8.84□□□□□ -0.99
SCAF11-210ENST00000547654 IRS1P35568 1242 aa8.84□□□□□ -0.99
SCAF11-210ENST00000547654 PSMG3-AS1Q96PY0 264 aa8.84□□□□□ -0.99
SCAF11-210ENST00000547654 PCDHB9Q9Y5E1 797 aa8.84□□□□□ -0.99
SCAF11-210ENST00000547654 PRICKLE2Q7Z3G6 844 aa8.83□□□□□ -1
SCAF11-210ENST00000547654 KDF1Q8NAX2 398 aaPredicted RBP8.83□□□□□ -1
SCAF11-210ENST00000547654 ATP5J2-PTCD1G3V325 749 aa8.82□□□□□ -1
SCAF11-210ENST00000547654 ARHGEF15O94989 841 aa8.82□□□□□ -1
SCAF11-210ENST00000547654 RHOQP17081 205 aa8.82□□□□□ -1
SCAF11-210ENST00000547654 SRSF11Q05519 484 aaKnown RBP8.82□□□□□ -1
SCAF11-210ENST00000547654 KRTAP1-3Q8IUG1 177 aa8.82□□□□□ -1
SCAF11-210ENST00000547654 SCARF2Q96GP6 870 aaPredicted RBP8.82□□□□□ -1
SCAF11-210ENST00000547654 PCMTD1Q96MG8 357 aaPredicted RBP8.82□□□□□ -1
SCAF11-210ENST00000547654 ZBBXA8MT70 800 aa8.81□□□□□ -1
SCAF11-210ENST00000547654 MEN1O00255 615 aa8.81□□□□□ -1
SCAF11-210ENST00000547654 TRIM34Q9BYJ4 488 aa8.81□□□□□ -1
SCAF11-210ENST00000547654 CUEDC1Q9NWM3 386 aaPredicted RBP8.81□□□□□ -1
SCAF11-210ENST00000547654 DNMT3AQ9Y6K1 912 aaPredicted RBP8.81□□□□□ -1
SCAF11-210ENST00000547654 RNF144AP50876 292 aaPredicted RBP8.8□□□□□ -1
SCAF11-210ENST00000547654 TMEM259Q4ZIN3 620 aa8.8□□□□□ -1
SCAF11-210ENST00000547654 KANK3Q6NY19 840 aa8.8□□□□□ -1
SCAF11-210ENST00000547654 FOXR1Q6PIV2 292 aa8.8□□□□□ -1
SCAF11-210ENST00000547654 RIPOR1Q6ZS17 1223 aa8.8□□□□□ -1
SCAF11-210ENST00000547654 GPR37L1O60883 481 aa8.79□□□□□ -1
SCAF11-210ENST00000547654 GAS6Q14393 721 aa8.79□□□□□ -1
SCAF11-210ENST00000547654 ZNF837Q96EG3 531 aaPredicted RBP8.79□□□□□ -1
SCAF11-210ENST00000547654 GIGYF1O75420 1035 aaPredicted RBP8.78□□□□□ -1
SCAF11-210ENST00000547654 IGHA1P01876 353 aa8.78□□□□□ -1
SCAF11-210ENST00000547654 LYPD4Q6UWN0 246 aa8.78□□□□□ -1
SCAF11-210ENST00000547654 TRIM22Q8IYM9 498 aa8.78□□□□□ -1
SCAF11-210ENST00000547654 ENAMQ9NRM1 1142 aa8.78□□□□□ -1
SCAF11-210ENST00000547654 FBXO45P0C2W1 286 aa8.77□□□□□ -1.01
SCAF11-210ENST00000547654 GPC1P35052 558 aa8.77□□□□□ -1.01
SCAF11-210ENST00000547654 SLC27A3Q5K4L6 730 aa8.77□□□□□ -1.01
SCAF11-210ENST00000547654 RNF20Q5VTR2 975 aa8.77□□□□□ -1.01
SCAF11-210ENST00000547654 CCDC125Q86Z20 511 aa8.77□□□□□ -1.01
SCAF11-210ENST00000547654 GMCL1Q96IK5 515 aa8.77□□□□□ -1.01
SCAF11-210ENST00000547654 GJD4Q96KN9 370 aaPredicted RBP8.77□□□□□ -1.01
SCAF11-210ENST00000547654 NLRP3Q96P20 1036 aa8.77□□□□□ -1.01
SCAF11-210ENST00000547654 MBIPQ9NS73 344 aa8.77□□□□□ -1.01
SCAF11-210ENST00000547654 GPR25O00155 361 aa8.76□□□□□ -1.01
SCAF11-210ENST00000547654 CELA2BP08218 269 aaPredicted RBP8.76□□□□□ -1.01
SCAF11-210ENST00000547654 CC2D2BQ6DHV5 1058 aa8.76□□□□□ -1.01
SCAF11-210ENST00000547654 A0A1W2PRU2 124 aa8.75□□□□□ -1.01
SCAF11-210ENST00000547654 H7C1W4 665 aa8.75□□□□□ -1.01
SCAF11-210ENST00000547654 ERVK-9P63128 1117 aa8.75□□□□□ -1.01
SCAF11-210ENST00000547654 CYP2U1Q7Z449 544 aa8.75□□□□□ -1.01
SCAF11-210ENST00000547654 ZNF592Q92610 1267 aa8.75□□□□□ -1.01
SCAF11-210ENST00000547654 TRERF1Q96PN7 1200 aa8.75□□□□□ -1.01
SCAF11-210ENST00000547654 GAS2L1Q99501 681 aaPredicted RBP8.75□□□□□ -1.01
SCAF11-210ENST00000547654 ESF1Q9H501 851 aaKnown RBP8.75□□□□□ -1.01
SCAF11-210ENST00000547654 FOXK2Q01167 660 aa8.74□□□□□ -1.01
SCAF11-210ENST00000547654 DYRK1BQ9Y463 629 aa8.74□□□□□ -1.01
SCAF11-210ENST00000547654 IGF1RP08069 1367 aa8.73□□□□□ -1.01
SCAF11-210ENST00000547654 SOCS7O14512 581 aa8.73□□□□□ -1.01
SCAF11-210ENST00000547654 GTPBP3Q969Y2 492 aaKnown RBP8.73□□□□□ -1.01
SCAF11-210ENST00000547654 ZNF330Q9Y3S2 320 aaPredicted RBP8.73□□□□□ -1.01
SCAF11-210ENST00000547654 ADAM23O75077 832 aa8.72□□□□□ -1.01
SCAF11-210ENST00000547654 MCCD1P59942 119 aaPredicted RBP8.72□□□□□ -1.01
SCAF11-210ENST00000547654 POU4F2Q12837 409 aa8.72□□□□□ -1.01
SCAF11-210ENST00000547654 DBN1Q16643 649 aa8.72□□□□□ -1.01
SCAF11-210ENST00000547654 PODNQ7Z5L7 613 aa8.72□□□□□ -1.01
SCAF11-210ENST00000547654 PCDHB11Q9Y5F2 797 aa8.72□□□□□ -1.01
SCAF11-210ENST00000547654 PHF20L1A8MW92 1017 aa8.71□□□□□ -1.02
SCAF11-210ENST00000547654 NR1H3Q13133 447 aa8.71□□□□□ -1.02
SCAF11-210ENST00000547654 CLN3Q13286 438 aa8.71□□□□□ -1.02
SCAF11-210ENST00000547654 NBPF10Q6P3W6 841 aaKnown RBP8.71□□□□□ -1.02
SCAF11-210ENST00000547654 NBPF15Q8N660 670 aa8.71□□□□□ -1.02
SCAF11-210ENST00000547654 NEDD1Q8NHV4 660 aa8.71□□□□□ -1.02
SCAF11-210ENST00000547654 ARHGEF10LQ9HCE6 1279 aa8.71□□□□□ -1.02
SCAF11-210ENST00000547654 NSFL1CQ9UNZ2 370 aaKnown RBP8.71□□□□□ -1.02
SCAF11-210ENST00000547654 BCRP11274 1271 aa8.7□□□□□ -1.02
SCAF11-210ENST00000547654 SCTRP47872 440 aa8.7□□□□□ -1.02
SCAF11-210ENST00000547654 MTMR14Q8NCE2 650 aa8.69□□□□□ -1.02
SCAF11-210ENST00000547654 TIMMDC1Q9NPL8 285 aa8.69□□□□□ -1.02
SCAF11-210ENST00000547654 WASLO00401 505 aaPredicted RBP8.68□□□□□ -1.02
SCAF11-210ENST00000547654 MX2P20592 715 aa8.68□□□□□ -1.02
SCAF11-210ENST00000547654 TAS1R3Q7RTX0 852 aa8.68□□□□□ -1.02
SCAF11-210ENST00000547654 BANK1Q8NDB2 785 aa8.68□□□□□ -1.02
SCAF11-210ENST00000547654 GRIP2Q9C0E4 1043 aa8.68□□□□□ -1.02
SCAF11-210ENST00000547654 NUCKS1Q9H1E3 243 aaKnown RBP8.68□□□□□ -1.02
SCAF11-210ENST00000547654 RAB6BQ9NRW1 208 aa8.67□□□□□ -1.02
SCAF11-210ENST00000547654 NDUFB9Q9Y6M9 179 aa8.67□□□□□ -1.02
SCAF11-210ENST00000547654 SPATA31C2B4DYI2 1134 aa8.66□□□□□ -1.02
SCAF11-210ENST00000547654 APBB1O00213 710 aa8.66□□□□□ -1.02
SCAF11-210ENST00000547654 F11P03951 625 aa8.66□□□□□ -1.02
SCAF11-210ENST00000547654 WDR44Q5JSH3 913 aa8.66□□□□□ -1.02
SCAF11-210ENST00000547654 BEND7Q8N7W2 519 aaPredicted RBP8.66□□□□□ -1.02
SCAF11-210ENST00000547654 ACDQ96AP0 544 aa8.66□□□□□ -1.02
SCAF11-210ENST00000547654 OSBPL3Q9H4L5 887 aa8.66□□□□□ -1.02
SCAF11-210ENST00000547654 SNRKQ9NRH2 765 aa8.66□□□□□ -1.02
SCAF11-210ENST00000547654 CNTNAP5Q8WYK1 1306 aa8.65□□□□□ -1.02
SCAF11-210ENST00000547654 MYCP01106 439 aaPredicted RBP8.65□□□□□ -1.02
SCAF11-210ENST00000547654 TRAK2O60296 914 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms