RNA–Protein interactions for RNA: ENST00000547378.1

AL139353.1-202, humanhuman

APPRIS P1 TSL 3 BASIC

Gene AL139353.1, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139353.1-202ENST00000547378 NEFMP07197 916 aa17.12■□□□□ 0.33
AL139353.1-202ENST00000547378 TATP17735 454 aaPredicted RBP17.12■□□□□ 0.33
AL139353.1-202ENST00000547378 USHBP1Q8N6Y0 703 aa17.12■□□□□ 0.33
AL139353.1-202ENST00000547378 THSD7AQ9UPZ6 1657 aa17.11■□□□□ 0.33
AL139353.1-202ENST00000547378 QTRT2Q9H974 415 aaKnown RBP17.11■□□□□ 0.33
AL139353.1-202ENST00000547378 PLEKHO1Q53GL0 409 aaPredicted RBP17.1■□□□□ 0.33
AL139353.1-202ENST00000547378 GAS2L2Q8NHY3 880 aa17.1■□□□□ 0.33
AL139353.1-202ENST00000547378 MAPK8IP3Q9UPT6 1336 aa17.1■□□□□ 0.33
AL139353.1-202ENST00000547378 TNS2Q63HR2 1409 aa17.1■□□□□ 0.33
AL139353.1-202ENST00000547378 RBM6P78332 1123 aaKnown RBP17.09■□□□□ 0.33
AL139353.1-202ENST00000547378 PHACTR3Q96KR7 559 aa17.09■□□□□ 0.33
AL139353.1-202ENST00000547378 RGS17Q9UGC6 210 aaPredicted RBP17.09■□□□□ 0.33
AL139353.1-202ENST00000547378 SPG7Q9UQ90 795 aa17.09■□□□□ 0.33
AL139353.1-202ENST00000547378 HTATSF1O43719 755 aaKnown RBP17.08■□□□□ 0.32
AL139353.1-202ENST00000547378 NFE2L2Q16236 605 aa17.08■□□□□ 0.32
AL139353.1-202ENST00000547378 CCDC27Q2M243 656 aa17.08■□□□□ 0.32
AL139353.1-202ENST00000547378 PHF23Q9BUL5 403 aaPredicted RBP17.08■□□□□ 0.32
AL139353.1-202ENST00000547378 ZCRB1Q8TBF4 217 aaKnown RBP17.07■□□□□ 0.32
AL139353.1-202ENST00000547378 CCDC9Q9Y3X0 531 aaKnown RBP17.07■□□□□ 0.32
AL139353.1-202ENST00000547378 PCDH11XQ9BZA7 1347 aa17.06■□□□□ 0.32
AL139353.1-202ENST00000547378 PCDH11YQ9BZA8 1340 aa17.06■□□□□ 0.32
AL139353.1-202ENST00000547378 TMPOP42166 694 aaKnown RBP17.06■□□□□ 0.32
AL139353.1-202ENST00000547378 USP35Q9P2H5 1018 aa17.06■□□□□ 0.32
AL139353.1-202ENST00000547378 APAF1O14727 1248 aa17.05■□□□□ 0.32
AL139353.1-202ENST00000547378 MTHFSDQ2M296 383 aaKnown RBP17.05■□□□□ 0.32
AL139353.1-202ENST00000547378 CCDC146Q8IYE0 955 aa17.05■□□□□ 0.32
AL139353.1-202ENST00000547378 LRRC37A3O60309 1634 aa17.05■□□□□ 0.32
AL139353.1-202ENST00000547378 BCL9O00512 1426 aa17.04■□□□□ 0.32
AL139353.1-202ENST00000547378 LMOD3Q0VAK6 560 aa17.04■□□□□ 0.32
AL139353.1-202ENST00000547378 NKX1-1Q15270 411 aaPredicted RBP17.04■□□□□ 0.32
AL139353.1-202ENST00000547378 FAM98CQ17RN3 349 aaKnown RBP17.04■□□□□ 0.32
AL139353.1-202ENST00000547378 AKAP4Q5JQC9 854 aa17.04■□□□□ 0.32
AL139353.1-202ENST00000547378 SHANK3Q9BYB0 1731 aa17.04■□□□□ 0.32
AL139353.1-202ENST00000547378 ADAMTS7Q9UKP4 1686 aa17.04■□□□□ 0.32
AL139353.1-202ENST00000547378 EXOC5O00471 708 aa17.03■□□□□ 0.32
AL139353.1-202ENST00000547378 HSP90AB1P08238 724 aaKnown RBP17.03■□□□□ 0.32
AL139353.1-202ENST00000547378 DDB1Q16531 1140 aa17.03■□□□□ 0.32
AL139353.1-202ENST00000547378 MAP3K5Q99683 1374 aa17.02■□□□□ 0.32
AL139353.1-202ENST00000547378 CYP27B1O15528 508 aa17.02■□□□□ 0.32
AL139353.1-202ENST00000547378 PHKG2P15735 406 aa17.02■□□□□ 0.32
AL139353.1-202ENST00000547378 RXRBP28702 533 aa17.02■□□□□ 0.32
AL139353.1-202ENST00000547378 ZNF530Q6P9A1 599 aaPredicted RBP17.02■□□□□ 0.32
AL139353.1-202ENST00000547378 IFNL2Q8IZJ0 200 aa17.02■□□□□ 0.32
AL139353.1-202ENST00000547378 GNAT3A8MTJ3 354 aa17.01■□□□□ 0.31
AL139353.1-202ENST00000547378 CEMIPQ8WUJ3 1361 aa17.01■□□□□ 0.31
AL139353.1-202ENST00000547378 ZNF521Q96K83 1311 aa17■□□□□ 0.31
AL139353.1-202ENST00000547378 RIPK4P57078 832 aa17■□□□□ 0.31
AL139353.1-202ENST00000547378 C1orf141Q5JVX7 400 aa17■□□□□ 0.31
AL139353.1-202ENST00000547378 POTEAQ6S8J7 498 aa17■□□□□ 0.31
AL139353.1-202ENST00000547378 DCAF5Q96JK2 942 aa17■□□□□ 0.31
AL139353.1-202ENST00000547378 ZBED9Q6R2W3 1325 aa16.99■□□□□ 0.31
AL139353.1-202ENST00000547378 SEPT12Q8IYM1 358 aa16.99■□□□□ 0.31
AL139353.1-202ENST00000547378 TRIM35Q9UPQ4 493 aa16.99■□□□□ 0.31
AL139353.1-202ENST00000547378 CALD1Q05682 793 aaKnown RBP16.98■□□□□ 0.31
AL139353.1-202ENST00000547378 MRC1P22897 1456 aa16.98■□□□□ 0.31
AL139353.1-202ENST00000547378 IL16Q14005 1332 aa16.97■□□□□ 0.31
AL139353.1-202ENST00000547378 WDR63Q8IWG1 891 aa16.97■□□□□ 0.31
AL139353.1-202ENST00000547378 WWC1Q8IX03 1113 aa16.97■□□□□ 0.31
AL139353.1-202ENST00000547378 DLG5Q8TDM6 1919 aa16.97■□□□□ 0.31
AL139353.1-202ENST00000547378 KDM6AO15550 1401 aaPredicted RBP16.96■□□□□ 0.31
AL139353.1-202ENST00000547378 HNRNPUQ00839 825 aaKnown RBP eCLIP16.96■□□□□ 0.31
AL139353.1-202ENST00000547378 RTF1Q92541 710 aaKnown RBP16.96■□□□□ 0.31
AL139353.1-202ENST00000547378 RGS12O14924 1447 aa16.96■□□□□ 0.3
AL139353.1-202ENST00000547378 ERVV-2B6SEH9 535 aa16.95■□□□□ 0.3
AL139353.1-202ENST00000547378 PDE3BQ13370 1112 aa16.95■□□□□ 0.3
AL139353.1-202ENST00000547378 MARCH10Q8NA82 808 aaPredicted RBP16.95■□□□□ 0.3
AL139353.1-202ENST00000547378 BABAM1Q9NWV8 329 aa16.95■□□□□ 0.3
AL139353.1-202ENST00000547378 RRP7AQ9Y3A4 280 aaKnown RBP16.95■□□□□ 0.3
AL139353.1-202ENST00000547378 SCN11AQ9UI33 1791 aa16.94■□□□□ 0.3
AL139353.1-202ENST00000547378 RNMTO43148 476 aaKnown RBP16.94■□□□□ 0.3
AL139353.1-202ENST00000547378 IL17REQ8NFR9 667 aa16.94■□□□□ 0.3
AL139353.1-202ENST00000547378 DDX54Q8TDD1 881 aaKnown RBP16.93■□□□□ 0.3
AL139353.1-202ENST00000547378 KRT27Q7Z3Y8 459 aa16.92■□□□□ 0.3
AL139353.1-202ENST00000547378 A0A0G2JS52 829 aa16.91■□□□□ 0.3
AL139353.1-202ENST00000547378 MYT1Q01538 1121 aa16.91■□□□□ 0.3
AL139353.1-202ENST00000547378 NEUROD2Q15784 382 aa16.91■□□□□ 0.3
AL139353.1-202ENST00000547378 MPRIPQ6WCQ1 1025 aa16.91■□□□□ 0.3
AL139353.1-202ENST00000547378 ZNF853P0CG23 659 aa16.9■□□□□ 0.3
AL139353.1-202ENST00000547378 SLC52A2Q9HAB3 445 aa16.9■□□□□ 0.3
AL139353.1-202ENST00000547378 IFT57Q9NWB7 429 aa16.9■□□□□ 0.3
AL139353.1-202ENST00000547378 SIPA1L3O60292 1781 aaPredicted RBP16.89■□□□□ 0.3
AL139353.1-202ENST00000547378 BRWD3Q6RI45 1802 aa16.89■□□□□ 0.29
AL139353.1-202ENST00000547378 TAF7Q15545 349 aaPredicted RBP16.89■□□□□ 0.29
AL139353.1-202ENST00000547378 FAM196AQ6ZSG2 479 aa16.89■□□□□ 0.29
AL139353.1-202ENST00000547378 MCM10Q7L590 875 aa16.89■□□□□ 0.29
AL139353.1-202ENST00000547378 CFAP44Q96MT7 982 aa16.89■□□□□ 0.29
AL139353.1-202ENST00000547378 LGR6Q9HBX8 967 aa16.89■□□□□ 0.29
AL139353.1-202ENST00000547378 TOGARAM1Q9Y4F4 1720 aa16.89■□□□□ 0.29
AL139353.1-202ENST00000547378 E9PSI1 815 aa16.88■□□□□ 0.29
AL139353.1-202ENST00000547378 CHL1O00533 1208 aa16.88■□□□□ 0.29
AL139353.1-202ENST00000547378 GNAI1P63096 354 aa16.88■□□□□ 0.29
AL139353.1-202ENST00000547378 GOLGA2Q08379 1002 aa16.88■□□□□ 0.29
AL139353.1-202ENST00000547378 TEFQ10587 303 aa16.88■□□□□ 0.29
AL139353.1-202ENST00000547378 DCTN1Q14203 1278 aa16.87■□□□□ 0.29
AL139353.1-202ENST00000547378 TRMT2AQ8IZ69 625 aaKnown RBP16.87■□□□□ 0.29
AL139353.1-202ENST00000547378 VIRMAQ69YN4 1812 aaKnown RBP16.86■□□□□ 0.29
AL139353.1-202ENST00000547378 NHSQ6T4R5 1651 aa16.86■□□□□ 0.29
AL139353.1-202ENST00000547378 CABP4P57796 275 aa16.86■□□□□ 0.29
AL139353.1-202ENST00000547378 MYH16Q9H6N6 1097 aa16.86■□□□□ 0.29
AL139353.1-202ENST00000547378 DOT1LQ8TEK3 1739 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms