RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 EXOC5O00471 708 aa30.93■■■□□ 2.54
SMARCD1-203ENST00000547247 MRS2Q9HD23 443 aa30.93■■■□□ 2.54
SMARCD1-203ENST00000547247 OVOS2A0A0G2JMS6 1433 aa30.92■■■□□ 2.54
SMARCD1-203ENST00000547247 PDE3BQ13370 1112 aa30.9■■■□□ 2.54
SMARCD1-203ENST00000547247 EP400Q96L91 3159 aa30.9■■■□□ 2.54
SMARCD1-203ENST00000547247 LRRC37A3O60309 1634 aa30.89■■■□□ 2.54
SMARCD1-203ENST00000547247 WDR43Q15061 677 aaKnown RBP eCLIP30.89■■■□□ 2.54
SMARCD1-203ENST00000547247 KRT27Q7Z3Y8 459 aa30.89■■■□□ 2.54
SMARCD1-203ENST00000547247 ZCRB1Q8TBF4 217 aaKnown RBP30.89■■■□□ 2.54
SMARCD1-203ENST00000547247 PLEKHG2Q9H7P9 1386 aa30.89■■■□□ 2.54
SMARCD1-203ENST00000547247 TNS2Q63HR2 1409 aa30.88■■■□□ 2.53
SMARCD1-203ENST00000547247 FCHSD2O94868 740 aa30.88■■■□□ 2.53
SMARCD1-203ENST00000547247 RSPH6AQ9H0K4 717 aa30.88■■■□□ 2.53
SMARCD1-203ENST00000547247 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.87■■■□□ 2.537e-6■■□□□ 12.8
SMARCD1-203ENST00000547247 MIER1Q8N108 512 aa30.85■■■□□ 2.53
SMARCD1-203ENST00000547247 SPG7Q9UQ90 795 aa30.85■■■□□ 2.53
SMARCD1-203ENST00000547247 CCER2I3L3R5 266 aa30.83■■■□□ 2.53
SMARCD1-203ENST00000547247 PRKAR2BP31323 418 aa30.83■■■□□ 2.53
SMARCD1-203ENST00000547247 AMOTQ4VCS5 1084 aa30.83■■■□□ 2.53
SMARCD1-203ENST00000547247 PLEKHO1Q53GL0 409 aaPredicted RBP30.83■■■□□ 2.53
SMARCD1-203ENST00000547247 UPF1Q92900 1129 aaKnown RBP eCLIP30.83■■■□□ 2.53
SMARCD1-203ENST00000547247 PNNQ9H307 717 aaKnown RBP30.82■■■□□ 2.52
SMARCD1-203ENST00000547247 PKD1L3Q7Z443 1732 aa30.81■■■□□ 2.52
SMARCD1-203ENST00000547247 DDX54Q8TDD1 881 aaKnown RBP30.81■■■□□ 2.52
SMARCD1-203ENST00000547247 PNISRQ8TF01 805 aaKnown RBP30.81■■■□□ 2.52
SMARCD1-203ENST00000547247 ADAMTS8Q9UP79 889 aa30.81■■■□□ 2.52
SMARCD1-203ENST00000547247 PCDH11XQ9BZA7 1347 aa30.81■■■□□ 2.52
SMARCD1-203ENST00000547247 PCDH11YQ9BZA8 1340 aa30.81■■■□□ 2.52
SMARCD1-203ENST00000547247 MARCH10Q8NA82 808 aaPredicted RBP30.79■■■□□ 2.52
SMARCD1-203ENST00000547247 FAM182BQ5T319 152 aa30.79■■■□□ 2.52
SMARCD1-203ENST00000547247 NEFMP07197 916 aa30.78■■■□□ 2.52
SMARCD1-203ENST00000547247 SHANK3Q9BYB0 1731 aa30.77■■■□□ 2.52
SMARCD1-203ENST00000547247 CYP27B1O15528 508 aa30.76■■■□□ 2.52
SMARCD1-203ENST00000547247 PHACTR3Q96KR7 559 aa30.75■■■□□ 2.51
SMARCD1-203ENST00000547247 PLEKHF1Q96S99 279 aa30.75■■■□□ 2.51
SMARCD1-203ENST00000547247 ZNF530Q6P9A1 599 aaPredicted RBP30.75■■■□□ 2.51
SMARCD1-203ENST00000547247 IFNL2Q8IZJ0 200 aa30.75■■■□□ 2.51
SMARCD1-203ENST00000547247 MTHFSDQ2M296 383 aaKnown RBP30.74■■■□□ 2.51
SMARCD1-203ENST00000547247 PHKG2P15735 406 aa30.72■■■□□ 2.51
SMARCD1-203ENST00000547247 FAM196AQ6ZSG2 479 aa30.72■■■□□ 2.51
SMARCD1-203ENST00000547247 GAS2L2Q8NHY3 880 aa30.72■■■□□ 2.51
SMARCD1-203ENST00000547247 MAPK8IP3Q9UPT6 1336 aa30.72■■■□□ 2.51
SMARCD1-203ENST00000547247 C1orf141Q5JVX7 400 aa30.71■■■□□ 2.51
SMARCD1-203ENST00000547247 CCDC146Q8IYE0 955 aa30.69■■■□□ 2.5
SMARCD1-203ENST00000547247 FAM9BQ8IZU0 186 aa30.69■■■□□ 2.5
SMARCD1-203ENST00000547247 RUNDC1Q96C34 613 aa30.69■■■□□ 2.5
SMARCD1-203ENST00000547247 BCL9O00512 1426 aa30.68■■■□□ 2.5
SMARCD1-203ENST00000547247 AKAP4Q5JQC9 854 aa30.68■■■□□ 2.5
SMARCD1-203ENST00000547247 HSP90AB1P08238 724 aaKnown RBP30.67■■■□□ 2.5
SMARCD1-203ENST00000547247 NKX1-1Q15270 411 aaPredicted RBP30.67■■■□□ 2.5
SMARCD1-203ENST00000547247 CCDC125Q86Z20 511 aa30.64■■■□□ 2.5
SMARCD1-203ENST00000547247 DCAF5Q96JK2 942 aa30.62■■■□□ 2.49
SMARCD1-203ENST00000547247 GNAT3A8MTJ3 354 aa30.62■■■□□ 2.49
SMARCD1-203ENST00000547247 NFE2L2Q16236 605 aa30.62■■■□□ 2.49
SMARCD1-203ENST00000547247 SBF2Q86WG5 1849 aa30.61■■■□□ 2.49
SMARCD1-203ENST00000547247 MAP3K5Q99683 1374 aa30.61■■■□□ 2.49
SMARCD1-203ENST00000547247 MPRIPQ6WCQ1 1025 aa30.61■■■□□ 2.49
SMARCD1-203ENST00000547247 ACSBG1Q96GR2 724 aa30.6■■■□□ 2.49
SMARCD1-203ENST00000547247 TNS1Q9HBL0 1735 aaKnown RBP30.6■■■□□ 2.49
SMARCD1-203ENST00000547247 SF3B2Q13435 895 aaKnown RBP30.58■■■□□ 2.49
SMARCD1-203ENST00000547247 KAT6BQ8WYB5 2073 aa30.58■■■□□ 2.49
SMARCD1-203ENST00000547247 TRIM37O94972 964 aa30.58■■■□□ 2.49
SMARCD1-203ENST00000547247 TMPOP42166 694 aaKnown RBP30.58■■■□□ 2.49
SMARCD1-203ENST00000547247 KDM6AO15550 1401 aaPredicted RBP30.57■■■□□ 2.48
SMARCD1-203ENST00000547247 APAF1O14727 1248 aa30.56■■■□□ 2.48
SMARCD1-203ENST00000547247 PRIM1P49642 420 aaKnown RBP30.56■■■□□ 2.48
SMARCD1-203ENST00000547247 RTF1Q92541 710 aaKnown RBP30.56■■■□□ 2.48
SMARCD1-203ENST00000547247 SYTL4Q96C24 671 aaPredicted RBP30.56■■■□□ 2.48
SMARCD1-203ENST00000547247 DOT1LQ8TEK3 1739 aa30.56■■■□□ 2.48
SMARCD1-203ENST00000547247 RNMTO43148 476 aaKnown RBP30.55■■■□□ 2.48
SMARCD1-203ENST00000547247 KCNQ2O43526 872 aa30.55■■■□□ 2.48
SMARCD1-203ENST00000547247 HTATSF1O43719 755 aaKnown RBP30.55■■■□□ 2.48
SMARCD1-203ENST00000547247 RIPK4P57078 832 aa30.55■■■□□ 2.48
SMARCD1-203ENST00000547247 ERVV-2B6SEH9 535 aa30.54■■■□□ 2.48
SMARCD1-203ENST00000547247 BCL11BQ9C0K0 894 aaPredicted RBP30.54■■■□□ 2.48
SMARCD1-203ENST00000547247 LGR6Q9HBX8 967 aa30.54■■■□□ 2.48
SMARCD1-203ENST00000547247 RRP7AQ9Y3A4 280 aaKnown RBP30.54■■■□□ 2.48
SMARCD1-203ENST00000547247 NEUROD2Q15784 382 aa30.54■■■□□ 2.48
SMARCD1-203ENST00000547247 TOGARAM1Q9Y4F4 1720 aa30.53■■■□□ 2.48
SMARCD1-203ENST00000547247 NHSQ6T4R5 1651 aa30.52■■■□□ 2.48
SMARCD1-203ENST00000547247 DLG5Q8TDM6 1919 aa30.52■■■□□ 2.48
SMARCD1-203ENST00000547247 IL17REQ8NFR9 667 aa30.52■■■□□ 2.48
SMARCD1-203ENST00000547247 SCN11AQ9UI33 1791 aa30.52■■■□□ 2.48
SMARCD1-203ENST00000547247 DEFB132Q7Z7B7 95 aa30.51■■■□□ 2.47
SMARCD1-203ENST00000547247 CABP4P57796 275 aa30.5■■■□□ 2.47
SMARCD1-203ENST00000547247 ADAMTS7Q9UKP4 1686 aa30.5■■■□□ 2.47
SMARCD1-203ENST00000547247 LMOD3Q0VAK6 560 aa30.49■■■□□ 2.47
SMARCD1-203ENST00000547247 PTF1AQ7RTS3 328 aa30.49■■■□□ 2.47
SMARCD1-203ENST00000547247 TMOD3Q9NYL9 352 aa30.49■■■□□ 2.47
SMARCD1-203ENST00000547247 BAG6P46379 1132 aa30.48■■■□□ 2.47
SMARCD1-203ENST00000547247 DCTN1Q14203 1278 aa30.48■■■□□ 2.47
SMARCD1-203ENST00000547247 MCM10Q7L590 875 aa30.48■■■□□ 2.47
SMARCD1-203ENST00000547247 CEMIPQ8WUJ3 1361 aa30.48■■■□□ 2.47
SMARCD1-203ENST00000547247 ITGB4P16144 1822 aa30.47■■■□□ 2.47
SMARCD1-203ENST00000547247 VIRMAQ69YN4 1812 aaKnown RBP30.47■■■□□ 2.47
SMARCD1-203ENST00000547247 SLC52A2Q9HAB3 445 aa30.47■■■□□ 2.47
SMARCD1-203ENST00000547247 NFATC2IPQ8NCF5 419 aa30.46■■■□□ 2.47
SMARCD1-203ENST00000547247 TEFQ10587 303 aa30.45■■■□□ 2.47
SMARCD1-203ENST00000547247 PIGBQ92521 554 aa30.45■■■□□ 2.47
SMARCD1-203ENST00000547247 APBA3O96018 575 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms