RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 EIF4G2P78344 907 aaKnown RBP eCLIP14.34□□□□□ -0.11
BEST3-208ENST00000547208 UTRNP46939 3433 aa14.34□□□□□ -0.11
BEST3-208ENST00000547208 PAPPAQ13219 1627 aa14.33□□□□□ -0.12
BEST3-208ENST00000547208 KIF24Q5T7B8 1368 aa14.33□□□□□ -0.12
BEST3-208ENST00000547208 PKD1L3Q7Z443 1732 aa14.32□□□□□ -0.12
BEST3-208ENST00000547208 KCNQ2O43526 872 aa14.32□□□□□ -0.12
BEST3-208ENST00000547208 PROM2Q8N271 834 aa14.32□□□□□ -0.12
BEST3-208ENST00000547208 INSRP06213 1382 aa14.32□□□□□ -0.12
BEST3-208ENST00000547208 ANO8Q9HCE9 1232 aaPredicted RBP14.31□□□□□ -0.12
BEST3-208ENST00000547208 LY75O60449 1722 aa14.31□□□□□ -0.12
BEST3-208ENST00000547208 FLT4P35916 1363 aa14.31□□□□□ -0.12
BEST3-208ENST00000547208 HSP90AB2PQ58FF8 381 aa14.3□□□□□ -0.12
BEST3-208ENST00000547208 NBPF6Q5VWK0 638 aa14.3□□□□□ -0.12
BEST3-208ENST00000547208 NBPF4Q96M43 638 aa14.3□□□□□ -0.12
BEST3-208ENST00000547208 NCAPD2Q15021 1401 aa14.3□□□□□ -0.12
BEST3-208ENST00000547208 TOGARAM1Q9Y4F4 1720 aa14.29□□□□□ -0.12
BEST3-208ENST00000547208 ITGB4P16144 1822 aa14.29□□□□□ -0.12
BEST3-208ENST00000547208 CGNL1Q0VF96 1302 aa14.28□□□□□ -0.12
BEST3-208ENST00000547208 QSER1Q2KHR3 1735 aa14.28□□□□□ -0.12
BEST3-208ENST00000547208 NBPF14Q5TI25 921 aa14.28□□□□□ -0.12
BEST3-208ENST00000547208 SMG6Q86US8 1419 aaKnown RBP14.28□□□□□ -0.12
BEST3-208ENST00000547208 ACSBG1Q96GR2 724 aa14.28□□□□□ -0.12
BEST3-208ENST00000547208 TUBGCP6Q96RT7 1819 aa14.28□□□□□ -0.12
BEST3-208ENST00000547208 EMILIN1Q9Y6C2 1016 aa14.28□□□□□ -0.12
BEST3-208ENST00000547208 USHBP1Q8N6Y0 703 aa14.27□□□□□ -0.13
BEST3-208ENST00000547208 POLR3GLQ9BT43 218 aa14.27□□□□□ -0.13
BEST3-208ENST00000547208 TXNRD1Q16881 649 aa14.26□□□□□ -0.13
BEST3-208ENST00000547208 NSD2O96028 1365 aa14.25□□□□□ -0.13
BEST3-208ENST00000547208 DDX54Q8TDD1 881 aaKnown RBP14.25□□□□□ -0.13
BEST3-208ENST00000547208 PANK3Q9H999 370 aa14.25□□□□□ -0.13
BEST3-208ENST00000547208 WASHC2AQ641Q2 1341 aa14.24□□□□□ -0.13
BEST3-208ENST00000547208 ZCRB1Q8TBF4 217 aaKnown RBP14.24□□□□□ -0.13
BEST3-208ENST00000547208 POLKQ9UBT6 870 aa14.24□□□□□ -0.13
BEST3-208ENST00000547208 TAF1LQ8IZX4 1826 aa14.23□□□□□ -0.13
BEST3-208ENST00000547208 ZBTB7AO95365 584 aa14.23□□□□□ -0.13
BEST3-208ENST00000547208 SPON1Q9HCB6 807 aa14.23□□□□□ -0.13
BEST3-208ENST00000547208 COL24A1Q17RW2 1714 aa14.22□□□□□ -0.13
BEST3-208ENST00000547208 PPP1R1BQ9UD71 204 aaPredicted RBP14.22□□□□□ -0.13
BEST3-208ENST00000547208 ATF5Q9Y2D1 282 aaPredicted RBP14.22□□□□□ -0.13
BEST3-208ENST00000547208 KIF7Q2M1P5 1343 aa14.21□□□□□ -0.13
BEST3-208ENST00000547208 PTGER2P43116 358 aa14.21□□□□□ -0.13
BEST3-208ENST00000547208 RAPGEF4Q8WZA2 1011 aa14.21□□□□□ -0.13
BEST3-208ENST00000547208 C5P01031 1676 aa14.2□□□□□ -0.14
BEST3-208ENST00000547208 PPM1GO15355 546 aaPredicted RBP14.2□□□□□ -0.14
BEST3-208ENST00000547208 TATP17735 454 aaPredicted RBP14.2□□□□□ -0.14
BEST3-208ENST00000547208 PRIM1P49642 420 aaKnown RBP14.2□□□□□ -0.14
BEST3-208ENST00000547208 ZNF784Q8NCA9 323 aaPredicted RBP14.2□□□□□ -0.14
BEST3-208ENST00000547208 LRRC4BQ9NT99 713 aa14.2□□□□□ -0.14
BEST3-208ENST00000547208 SLC15A2Q16348 729 aa14.19□□□□□ -0.14
BEST3-208ENST00000547208 EYA1Q99502 592 aa14.19□□□□□ -0.14
BEST3-208ENST00000547208 PCDH11XQ9BZA7 1347 aa14.18□□□□□ -0.14
BEST3-208ENST00000547208 PCDH11YQ9BZA8 1340 aa14.18□□□□□ -0.14
BEST3-208ENST00000547208 CYP27B1O15528 508 aa14.18□□□□□ -0.14
BEST3-208ENST00000547208 TNNT2P45379 298 aaPredicted RBP14.18□□□□□ -0.14
BEST3-208ENST00000547208 STK32BQ9NY57 414 aa14.18□□□□□ -0.14
BEST3-208ENST00000547208 EIF4A2Q14240 407 aaKnown RBP14.17□□□□□ -0.14
BEST3-208ENST00000547208 ZNF827Q17R98 1081 aa14.17□□□□□ -0.14
BEST3-208ENST00000547208 SYTL4Q96C24 671 aaPredicted RBP14.17□□□□□ -0.14
BEST3-208ENST00000547208 VIRMAQ69YN4 1812 aaKnown RBP14.17□□□□□ -0.14
BEST3-208ENST00000547208 AMER1Q5JTC6 1135 aaPredicted RBP14.16□□□□□ -0.14
BEST3-208ENST00000547208 SLC27A3Q5K4L6 730 aa14.15□□□□□ -0.14
BEST3-208ENST00000547208 AKT1S1Q96B36 256 aa14.15□□□□□ -0.14
BEST3-208ENST00000547208 IGSF1Q8N6C5 1336 aa14.15□□□□□ -0.15
BEST3-208ENST00000547208 PLEKHG2Q9H7P9 1386 aa14.14□□□□□ -0.15
BEST3-208ENST00000547208 PER1O15534 1290 aaPredicted RBP14.14□□□□□ -0.15
BEST3-208ENST00000547208 KCNQ4P56696 695 aa14.14□□□□□ -0.15
BEST3-208ENST00000547208 NKX1-1Q15270 411 aaPredicted RBP14.14□□□□□ -0.15
BEST3-208ENST00000547208 FHDC1Q9C0D6 1143 aaPredicted RBP14.14□□□□□ -0.15
BEST3-208ENST00000547208 UBR3Q6ZT12 1888 aa14.13□□□□□ -0.15
BEST3-208ENST00000547208 MORC1Q86VD1 984 aa14.13□□□□□ -0.15
BEST3-208ENST00000547208 SGIP1Q9BQI5 828 aa14.13□□□□□ -0.15
BEST3-208ENST00000547208 SYT17Q9BSW7 474 aa14.13□□□□□ -0.15
BEST3-208ENST00000547208 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.13□□□□□ -0.15
BEST3-208ENST00000547208 KNSTRNQ9Y448 316 aa14.13□□□□□ -0.15
BEST3-208ENST00000547208 C4BP0C0L5 1744 aa14.12□□□□□ -0.15
BEST3-208ENST00000547208 SCN11AQ9UI33 1791 aa14.11□□□□□ -0.15
BEST3-208ENST00000547208 SENP3-EIF4A1A0A087X0R7 540 aa14.11□□□□□ -0.15
BEST3-208ENST00000547208 SPG7Q9UQ90 795 aa14.11□□□□□ -0.15
BEST3-208ENST00000547208 ZNF831Q5JPB2 1677 aa14.1□□□□□ -0.15
BEST3-208ENST00000547208 CHD4Q14839 1912 aa14.1□□□□□ -0.15
BEST3-208ENST00000547208 MTFR1LQ9H019 292 aa14.1□□□□□ -0.15
BEST3-208ENST00000547208 PNPLA7Q6ZV29 1317 aa14.1□□□□□ -0.15
BEST3-208ENST00000547208 PALLDQ8WX93 1383 aa14.09□□□□□ -0.15
BEST3-208ENST00000547208 PHKG2P15735 406 aa14.09□□□□□ -0.15
BEST3-208ENST00000547208 MPRIPQ6WCQ1 1025 aa14.09□□□□□ -0.15
BEST3-208ENST00000547208 CCNL1Q9UK58 526 aaPredicted RBP14.09□□□□□ -0.15
BEST3-208ENST00000547208 KDRP35968 1356 aa14.09□□□□□ -0.15
BEST3-208ENST00000547208 COL5A3P25940 1745 aaPredicted RBP14.08□□□□□ -0.16
BEST3-208ENST00000547208 PIGBQ92521 554 aa14.08□□□□□ -0.16
BEST3-208ENST00000547208 IL13P35225 146 aa14.07□□□□□ -0.16
BEST3-208ENST00000547208 C1QTNF8P60827 252 aa14.07□□□□□ -0.16
BEST3-208ENST00000547208 AEBP1Q8IUX7 1158 aa14.07□□□□□ -0.16
BEST3-208ENST00000547208 IFNL2Q8IZJ0 200 aa14.07□□□□□ -0.16
BEST3-208ENST00000547208 GOLGB1Q14789 3259 aaKnown RBP14.07□□□□□ -0.16
BEST3-208ENST00000547208 NPC1L1Q9UHC9 1359 aa14.07□□□□□ -0.16
BEST3-208ENST00000547208 KDM6AO15550 1401 aaPredicted RBP14.07□□□□□ -0.16
BEST3-208ENST00000547208 COL3A1P02461 1466 aaPredicted RBP14.06□□□□□ -0.16
BEST3-208ENST00000547208 ADAMTS7Q9UKP4 1686 aa14.05□□□□□ -0.16
BEST3-208ENST00000547208 TFCP2L1Q9NZI6 479 aa14.05□□□□□ -0.16
BEST3-208ENST00000547208 MTHFSP49914 203 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms