RNA–Protein interactions for RNA: ENST00000546961.1

SCN8A-204, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-204ENST00000546961 MYOM1P52179 1685 aa28.03■■■□□ 2.08
SCN8A-204ENST00000546961 CDCA8Q53HL2 280 aa28.03■■■□□ 2.08
SCN8A-204ENST00000546961 TFCP2L1Q9NZI6 479 aa28.02■■■□□ 2.08
SCN8A-204ENST00000546961 RAPGEF4Q8WZA2 1011 aa28.01■■■□□ 2.07
SCN8A-204ENST00000546961 HSP90AB2PQ58FF8 381 aa28■■■□□ 2.07
SCN8A-204ENST00000546961 SLC16A10Q8TF71 515 aa27.99■■■□□ 2.07
SCN8A-204ENST00000546961 RTL1A6NKG5 1358 aa27.99■■■□□ 2.07
SCN8A-204ENST00000546961 MEGF6O75095 1541 aa27.97■■■□□ 2.07
SCN8A-204ENST00000546961 TATP17735 454 aaPredicted RBP27.97■■■□□ 2.07
SCN8A-204ENST00000546961 FAM208AQ9UK61 1670 aaKnown RBP27.97■■■□□ 2.07
SCN8A-204ENST00000546961 PAPPAQ13219 1627 aa27.96■■■□□ 2.07
SCN8A-204ENST00000546961 CGNL1Q0VF96 1302 aa27.96■■■□□ 2.07
SCN8A-204ENST00000546961 PNPLA7Q6ZV29 1317 aa27.96■■■□□ 2.07
SCN8A-204ENST00000546961 CARD14Q9BXL6 1004 aa27.96■■■□□ 2.07
SCN8A-204ENST00000546961 CCNL1Q9UK58 526 aaPredicted RBP27.96■■■□□ 2.07
SCN8A-204ENST00000546961 POLD1P28340 1107 aa27.95■■■□□ 2.06
SCN8A-204ENST00000546961 KLHL34Q8N239 644 aa27.95■■■□□ 2.06
SCN8A-204ENST00000546961 SMG6Q86US8 1419 aaKnown RBP27.94■■■□□ 2.06
SCN8A-204ENST00000546961 RGPD2P0DJD1 1756 aa27.94■■■□□ 2.06
SCN8A-204ENST00000546961 NSD2O96028 1365 aa27.93■■■□□ 2.06
SCN8A-204ENST00000546961 INSRP06213 1382 aa27.93■■■□□ 2.06
SCN8A-204ENST00000546961 MSH5O43196 834 aa27.91■■■□□ 2.06
SCN8A-204ENST00000546961 GPR162Q16538 588 aa27.9■■■□□ 2.06
SCN8A-204ENST00000546961 PPM1GO15355 546 aaPredicted RBP27.89■■■□□ 2.06
SCN8A-204ENST00000546961 ZNF784Q8NCA9 323 aaPredicted RBP27.89■■■□□ 2.06
SCN8A-204ENST00000546961 EMILIN1Q9Y6C2 1016 aa27.89■■■□□ 2.06
SCN8A-204ENST00000546961 FLT4P35916 1363 aa27.88■■■□□ 2.05
SCN8A-204ENST00000546961 MAP3K5Q99683 1374 aa27.88■■■□□ 2.05
SCN8A-204ENST00000546961 MPRIPQ6WCQ1 1025 aa27.87■■■□□ 2.05
SCN8A-204ENST00000546961 COL23A1Q86Y22 540 aaPredicted RBP27.86■■■□□ 2.05
SCN8A-204ENST00000546961 PCDH11XQ9BZA7 1347 aa27.86■■■□□ 2.05
SCN8A-204ENST00000546961 PCDH11YQ9BZA8 1340 aa27.86■■■□□ 2.05
SCN8A-204ENST00000546961 DOT1LQ8TEK3 1739 aa27.85■■■□□ 2.05
SCN8A-204ENST00000546961 CYP27B1O15528 508 aa27.85■■■□□ 2.05
SCN8A-204ENST00000546961 PELP1Q8IZL8 1130 aaKnown RBP27.85■■■□□ 2.05
SCN8A-204ENST00000546961 TIMELESSQ9UNS1 1208 aa27.85■■■□□ 2.05
SCN8A-204ENST00000546961 KIF24Q5T7B8 1368 aa27.85■■■□□ 2.05
SCN8A-204ENST00000546961 NSD3Q9BZ95 1437 aa27.84■■■□□ 2.05
SCN8A-204ENST00000546961 PCGF6Q9BYE7 350 aa27.84■■■□□ 2.05
SCN8A-204ENST00000546961 POLR3GLQ9BT43 218 aa27.83■■■□□ 2.05
SCN8A-204ENST00000546961 SHANK3Q9BYB0 1731 aa27.82■■■□□ 2.04
SCN8A-204ENST00000546961 NLGN2Q8NFZ4 835 aa27.8■■■□□ 2.04
SCN8A-204ENST00000546961 UTRNP46939 3433 aa27.8■■■□□ 2.04
SCN8A-204ENST00000546961 MSL1Q68DK7 614 aa27.79■■■□□ 2.04
SCN8A-204ENST00000546961 LY75O60449 1722 aa27.78■■■□□ 2.04
SCN8A-204ENST00000546961 HMGB2P26583 209 aaKnown RBP27.78■■■□□ 2.04
SCN8A-204ENST00000546961 PALLDQ8WX93 1383 aa27.77■■■□□ 2.04
SCN8A-204ENST00000546961 WASHC2AQ641Q2 1341 aa27.77■■■□□ 2.04
SCN8A-204ENST00000546961 SMARCC1Q92922 1105 aaPredicted RBP27.77■■■□□ 2.04
SCN8A-204ENST00000546961 EYA1Q99502 592 aa27.77■■■□□ 2.04
SCN8A-204ENST00000546961 SPG7Q9UQ90 795 aa27.77■■■□□ 2.04
SCN8A-204ENST00000546961 PIGBQ92521 554 aa27.76■■■□□ 2.03
SCN8A-204ENST00000546961 KIF20BQ96Q89 1820 aa27.76■■■□□ 2.03
SCN8A-204ENST00000546961 QSER1Q2KHR3 1735 aa27.75■■■□□ 2.03
SCN8A-204ENST00000546961 FLAD1Q8NFF5 587 aa27.75■■■□□ 2.03
SCN8A-204ENST00000546961 POLKQ9UBT6 870 aa27.75■■■□□ 2.03
SCN8A-204ENST00000546961 TNNT2P45379 298 aaPredicted RBP27.74■■■□□ 2.03
SCN8A-204ENST00000546961 NKX1-1Q15270 411 aaPredicted RBP27.74■■■□□ 2.03
SCN8A-204ENST00000546961 TUBGCP6Q96RT7 1819 aa27.72■■■□□ 2.03
SCN8A-204ENST00000546961 AK7Q96M32 723 aa27.7■■■□□ 2.02
SCN8A-204ENST00000546961 CHD4Q14839 1912 aa27.7■■■□□ 2.02
SCN8A-204ENST00000546961 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.69■■■□□ 2.02
SCN8A-204ENST00000546961 CLSPNQ9HAW4 1339 aa27.68■■■□□ 2.02
SCN8A-204ENST00000546961 SMIM5Q71RC9 77 aa27.68■■■□□ 2.02
SCN8A-204ENST00000546961 COL24A1Q17RW2 1714 aa27.67■■■□□ 2.02
SCN8A-204ENST00000546961 GRIN3BO60391 1043 aa27.67■■■□□ 2.02
SCN8A-204ENST00000546961 YBX3P16989 372 aaKnown RBP eCLIP27.67■■■□□ 2.02
SCN8A-204ENST00000546961 IFNL2Q8IZJ0 200 aa27.67■■■□□ 2.02
SCN8A-204ENST00000546961 TMOD3Q9NYL9 352 aa27.67■■■□□ 2.02
SCN8A-204ENST00000546961 PHF14O94880 888 aa27.66■■■□□ 2.02
SCN8A-204ENST00000546961 LOC102724428A0A0B4J2F2 783 aa27.65■■■□□ 2.02
SCN8A-204ENST00000546961 SIK1P57059 783 aa27.65■■■□□ 2.02
SCN8A-204ENST00000546961 EIF4A2Q14240 407 aaKnown RBP27.65■■■□□ 2.02
SCN8A-204ENST00000546961 AMIGO3Q86WK7 504 aa27.65■■■□□ 2.02
SCN8A-204ENST00000546961 ASAP1Q9ULH1 1129 aa27.65■■■□□ 2.02
SCN8A-204ENST00000546961 NCAPD2Q15021 1401 aa27.65■■■□□ 2.02
SCN8A-204ENST00000546961 PHKG2P15735 406 aa27.64■■■□□ 2.02
SCN8A-204ENST00000546961 EIF4G2P78344 907 aaKnown RBP eCLIP27.64■■■□□ 2.02
SCN8A-204ENST00000546961 PANK3Q9H999 370 aa27.64■■■□□ 2.02
SCN8A-204ENST00000546961 CD2APQ9Y5K6 639 aa27.64■■■□□ 2.02
SCN8A-204ENST00000546961 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.63■■■□□ 2.01
SCN8A-204ENST00000546961 HSPA5P11021 654 aaKnown RBP27.63■■■□□ 2.01
SCN8A-204ENST00000546961 MAP2P11137 1827 aaKnown RBP27.62■■■□□ 2.01
SCN8A-204ENST00000546961 C1QTNF8P60827 252 aa27.62■■■□□ 2.01
SCN8A-204ENST00000546961 LINC00116Q8NCU8 138 aa27.62■■■□□ 2.01
SCN8A-204ENST00000546961 C5P01031 1676 aa27.61■■■□□ 2.01
SCN8A-204ENST00000546961 ATP6V1AP38606 617 aa27.6■■■□□ 2.01
SCN8A-204ENST00000546961 ATG3Q9NT62 314 aa27.59■■■□□ 2.01
SCN8A-204ENST00000546961 ITGB4P16144 1822 aa27.59■■■□□ 2.01
SCN8A-204ENST00000546961 TOGARAM1Q9Y4F4 1720 aa27.58■■■□□ 2.01
SCN8A-204ENST00000546961 ITPK1Q13572 414 aa27.58■■■□□ 2.01
SCN8A-204ENST00000546961 PKD1L3Q7Z443 1732 aa27.58■■■□□ 2.01
SCN8A-204ENST00000546961 SSFA2P28290 1259 aa27.57■■■□□ 2
SCN8A-204ENST00000546961 SENP3-EIF4A1A0A087X0R7 540 aa27.56■■■□□ 2
SCN8A-204ENST00000546961 GNPATO15228 680 aa27.56■■■□□ 2
SCN8A-204ENST00000546961 GOLGB1Q14789 3259 aaKnown RBP27.56■■■□□ 2
SCN8A-204ENST00000546961 C4BP0C0L5 1744 aa27.55■■■□□ 2
SCN8A-204ENST00000546961 TAF1LQ8IZX4 1826 aa27.55■■■□□ 2
SCN8A-204ENST00000546961 GIGYF1O75420 1035 aaPredicted RBP27.55■■■□□ 2
SCN8A-204ENST00000546961 PLEKHO1Q53GL0 409 aaPredicted RBP27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms