RNA–Protein interactions for RNA: ENST00000546592.1

GPN3-204, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 638 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-204ENST00000546592 AEBP1Q8IUX7 1158 aa25.81■■□□□ 1.72
GPN3-204ENST00000546592 PLEKHG2Q9H7P9 1386 aa25.81■■□□□ 1.72
GPN3-204ENST00000546592 HMOX1P09601 288 aa25.8■■□□□ 1.72
GPN3-204ENST00000546592 U2AF1L5P0DN76 240 aaPredicted RBP25.8■■□□□ 1.72
GPN3-204ENST00000546592 U2AF1Q01081 240 aaKnown RBP eCLIP25.8■■□□□ 1.72
GPN3-204ENST00000546592 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.79■■□□□ 1.72
GPN3-204ENST00000546592 SPG7Q9UQ90 795 aa25.79■■□□□ 1.72
GPN3-204ENST00000546592 DDX54Q8TDD1 881 aaKnown RBP25.77■■□□□ 1.72
GPN3-204ENST00000546592 PLEKHO1Q53GL0 409 aaPredicted RBP25.76■■□□□ 1.71
GPN3-204ENST00000546592 DIEXFQ68CQ4 756 aaKnown RBP25.76■■□□□ 1.71
GPN3-204ENST00000546592 FAM196AQ6ZSG2 479 aa25.76■■□□□ 1.71
GPN3-204ENST00000546592 MARCH10Q8NA82 808 aaPredicted RBP25.76■■□□□ 1.71
GPN3-204ENST00000546592 PCDH11XQ9BZA7 1347 aa25.75■■□□□ 1.71
GPN3-204ENST00000546592 PCDH11YQ9BZA8 1340 aa25.75■■□□□ 1.71
GPN3-204ENST00000546592 AMOTQ4VCS5 1084 aa25.75■■□□□ 1.71
GPN3-204ENST00000546592 FAM182BQ5T319 152 aa25.75■■□□□ 1.71
GPN3-204ENST00000546592 FCHSD2O94868 740 aa25.73■■□□□ 1.71
GPN3-204ENST00000546592 WDR43Q15061 677 aaKnown RBP eCLIP25.73■■□□□ 1.71
GPN3-204ENST00000546592 PKD1L3Q7Z443 1732 aa25.71■■□□□ 1.71
GPN3-204ENST00000546592 RSPH6AQ9H0K4 717 aa25.71■■□□□ 1.71
GPN3-204ENST00000546592 PNNQ9H307 717 aaKnown RBP25.71■■□□□ 1.71
GPN3-204ENST00000546592 NEFMP07197 916 aa25.7■■□□□ 1.7
GPN3-204ENST00000546592 PRKAR2BP31323 418 aa25.7■■□□□ 1.7
GPN3-204ENST00000546592 MRS2Q9HD23 443 aa25.69■■□□□ 1.7
GPN3-204ENST00000546592 BCL9O00512 1426 aa25.69■■□□□ 1.7
GPN3-204ENST00000546592 ZNF530Q6P9A1 599 aaPredicted RBP25.68■■□□□ 1.7
GPN3-204ENST00000546592 IFNL2Q8IZJ0 200 aa25.68■■□□□ 1.7
GPN3-204ENST00000546592 CYP27B1O15528 508 aa25.67■■□□□ 1.7
GPN3-204ENST00000546592 C1orf141Q5JVX7 400 aa25.67■■□□□ 1.7
GPN3-204ENST00000546592 SHANK3Q9BYB0 1731 aa25.66■■□□□ 1.7
GPN3-204ENST00000546592 HSP90AB1P08238 724 aaKnown RBP25.65■■□□□ 1.7
GPN3-204ENST00000546592 PHKG2P15735 406 aa25.65■■□□□ 1.7
GPN3-204ENST00000546592 CCDC184Q52MB2 194 aa25.64■■□□□ 1.7
GPN3-204ENST00000546592 CCDC125Q86Z20 511 aa25.64■■□□□ 1.7
GPN3-204ENST00000546592 GAS2L2Q8NHY3 880 aa25.64■■□□□ 1.7
GPN3-204ENST00000546592 SF3B2Q13435 895 aaKnown RBP25.63■■□□□ 1.69
GPN3-204ENST00000546592 SOCS7O14512 581 aa25.62■■□□□ 1.69
GPN3-204ENST00000546592 TRIM37O94972 964 aa25.62■■□□□ 1.69
GPN3-204ENST00000546592 NKX1-1Q15270 411 aaPredicted RBP25.62■■□□□ 1.69
GPN3-204ENST00000546592 MTHFSDQ2M296 383 aaKnown RBP25.62■■□□□ 1.69
GPN3-204ENST00000546592 UPF1Q92900 1129 aaKnown RBP eCLIP25.62■■□□□ 1.69
GPN3-204ENST00000546592 MAPK8IP3Q9UPT6 1336 aa25.62■■□□□ 1.69
GPN3-204ENST00000546592 AKAP4Q5JQC9 854 aa25.61■■□□□ 1.69
GPN3-204ENST00000546592 ADAMTS8Q9UP79 889 aa25.61■■□□□ 1.69
GPN3-204ENST00000546592 ACSBG1Q96GR2 724 aa25.6■■□□□ 1.69
GPN3-204ENST00000546592 PHACTR3Q96KR7 559 aa25.6■■□□□ 1.69
GPN3-204ENST00000546592 BCL11BQ9C0K0 894 aaPredicted RBP25.59■■□□□ 1.69
GPN3-204ENST00000546592 DCAF5Q96JK2 942 aa25.58■■□□□ 1.69
GPN3-204ENST00000546592 PLEKHF1Q96S99 279 aa25.58■■□□□ 1.69
GPN3-204ENST00000546592 PNISRQ8TF01 805 aaKnown RBP25.57■■□□□ 1.68
GPN3-204ENST00000546592 CCER2I3L3R5 266 aa25.56■■□□□ 1.68
GPN3-204ENST00000546592 PRIM1P49642 420 aaKnown RBP25.56■■□□□ 1.68
GPN3-204ENST00000546592 SYTL4Q96C24 671 aaPredicted RBP25.56■■□□□ 1.68
GPN3-204ENST00000546592 RUNDC1Q96C34 613 aa25.55■■□□□ 1.68
GPN3-204ENST00000546592 SBF2Q86WG5 1849 aa25.55■■□□□ 1.68
GPN3-204ENST00000546592 GNAT3A8MTJ3 354 aa25.54■■□□□ 1.68
GPN3-204ENST00000546592 KCNQ2O43526 872 aa25.54■■□□□ 1.68
GPN3-204ENST00000546592 NHSQ6T4R5 1651 aa25.54■■□□□ 1.68
GPN3-204ENST00000546592 MAP3K5Q99683 1374 aa25.54■■□□□ 1.68
GPN3-204ENST00000546592 APBA3O96018 575 aa25.53■■□□□ 1.68
GPN3-204ENST00000546592 MPRIPQ6WCQ1 1025 aa25.53■■□□□ 1.68
GPN3-204ENST00000546592 DOT1LQ8TEK3 1739 aa25.53■■□□□ 1.68
GPN3-204ENST00000546592 ERVV-2B6SEH9 535 aa25.52■■□□□ 1.68
GPN3-204ENST00000546592 BAG6P46379 1132 aa25.52■■□□□ 1.68
GPN3-204ENST00000546592 CCDC146Q8IYE0 955 aa25.52■■□□□ 1.68
GPN3-204ENST00000546592 NFE2L2Q16236 605 aa25.51■■□□□ 1.67
GPN3-204ENST00000546592 MIER1Q8N108 512 aa25.51■■□□□ 1.67
GPN3-204ENST00000546592 RTF1Q92541 710 aaKnown RBP25.51■■□□□ 1.67
GPN3-204ENST00000546592 EP400Q96L91 3159 aa25.51■■□□□ 1.67
GPN3-204ENST00000546592 KAT6BQ8WYB5 2073 aa25.51■■□□□ 1.67
GPN3-204ENST00000546592 KDM6AO15550 1401 aaPredicted RBP25.5■■□□□ 1.67
GPN3-204ENST00000546592 TMOD3Q9NYL9 352 aa25.5■■□□□ 1.67
GPN3-204ENST00000546592 RNMTO43148 476 aaKnown RBP25.49■■□□□ 1.67
GPN3-204ENST00000546592 HTATSF1O43719 755 aaKnown RBP25.49■■□□□ 1.67
GPN3-204ENST00000546592 CABP4P57796 275 aa25.49■■□□□ 1.67
GPN3-204ENST00000546592 PTF1AQ7RTS3 328 aa25.49■■□□□ 1.67
GPN3-204ENST00000546592 TNS1Q9HBL0 1735 aaKnown RBP25.49■■□□□ 1.67
GPN3-204ENST00000546592 TOGARAM1Q9Y4F4 1720 aa25.47■■□□□ 1.67
GPN3-204ENST00000546592 FAM9BQ8IZU0 186 aa25.47■■□□□ 1.67
GPN3-204ENST00000546592 LGR6Q9HBX8 967 aa25.47■■□□□ 1.67
GPN3-204ENST00000546592 PLSCR1O15162 318 aa25.45■■□□□ 1.66
GPN3-204ENST00000546592 TMPOP42166 694 aaKnown RBP25.45■■□□□ 1.66
GPN3-204ENST00000546592 PIGBQ92521 554 aa25.45■■□□□ 1.66
GPN3-204ENST00000546592 RIPK4P57078 832 aa25.44■■□□□ 1.66
GPN3-204ENST00000546592 LMOD3Q0VAK6 560 aa25.44■■□□□ 1.66
GPN3-204ENST00000546592 DEFB132Q7Z7B7 95 aa25.44■■□□□ 1.66
GPN3-204ENST00000546592 IL17REQ8NFR9 667 aa25.44■■□□□ 1.66
GPN3-204ENST00000546592 SCN11AQ9UI33 1791 aa25.44■■□□□ 1.66
GPN3-204ENST00000546592 BTAF1O14981 1849 aa25.43■■□□□ 1.66
GPN3-204ENST00000546592 EN1Q05925 392 aaPredicted RBP25.43■■□□□ 1.66
GPN3-204ENST00000546592 TEFQ10587 303 aa25.43■■□□□ 1.66
GPN3-204ENST00000546592 SLC52A2Q9HAB3 445 aa25.43■■□□□ 1.66
GPN3-204ENST00000546592 ITGB4P16144 1822 aa25.42■■□□□ 1.66
GPN3-204ENST00000546592 NFATC2IPQ8NCF5 419 aa25.42■■□□□ 1.66
GPN3-204ENST00000546592 SMARCC1Q92922 1105 aaPredicted RBP25.42■■□□□ 1.66
GPN3-204ENST00000546592 ADAMTS7Q9UKP4 1686 aa25.42■■□□□ 1.66
GPN3-204ENST00000546592 APAF1O14727 1248 aa25.41■■□□□ 1.66
GPN3-204ENST00000546592 NEUROD2Q15784 382 aa25.41■■□□□ 1.66
GPN3-204ENST00000546592 MCM10Q7L590 875 aa25.4■■□□□ 1.66
GPN3-204ENST00000546592 RRP7AQ9Y3A4 280 aaKnown RBP25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms