RNA–Protein interactions for RNA: ENST00000546279.5

LMO3-233, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-233ENST00000546279 NUP188Q5SRE5 1749 aa14.5□□□□□ -0.09
LMO3-233ENST00000546279 USP35Q9P2H5 1018 aa14.5□□□□□ -0.09
LMO3-233ENST00000546279 THRAP3Q9Y2W1 955 aaKnown RBP14.5□□□□□ -0.09
LMO3-233ENST00000546279 ERBB3P21860 1342 aa14.49□□□□□ -0.09
LMO3-233ENST00000546279 PPP2R1AP30153 589 aa14.49□□□□□ -0.09
LMO3-233ENST00000546279 TNNT2P45379 298 aaPredicted RBP14.49□□□□□ -0.09
LMO3-233ENST00000546279 C1QTNF8P60827 252 aa14.49□□□□□ -0.09
LMO3-233ENST00000546279 HSP90AB2PQ58FF8 381 aa14.49□□□□□ -0.09
LMO3-233ENST00000546279 TCP11L2Q8N4U5 519 aa14.49□□□□□ -0.09
LMO3-233ENST00000546279 PRKRIP1Q9H875 184 aaPredicted RBP14.49□□□□□ -0.09
LMO3-233ENST00000546279 SHANK3Q9BYB0 1731 aa14.49□□□□□ -0.09
LMO3-233ENST00000546279 PLSCR1O15162 318 aa14.48□□□□□ -0.09
LMO3-233ENST00000546279 PARP4Q9UKK3 1724 aaKnown RBP14.48□□□□□ -0.09
LMO3-233ENST00000546279 WDR17Q8IZU2 1322 aa14.47□□□□□ -0.09
LMO3-233ENST00000546279 MTHFSP49914 203 aa14.46□□□□□ -0.09
LMO3-233ENST00000546279 LARP1Q6PKG0 1096 aaKnown RBP14.46□□□□□ -0.09
LMO3-233ENST00000546279 CRB1P82279 1406 aa14.46□□□□□ -0.09
LMO3-233ENST00000546279 C1QBPQ07021 282 aaKnown RBP14.45□□□□□ -0.1
LMO3-233ENST00000546279 RALBP1Q15311 655 aa14.45□□□□□ -0.1
LMO3-233ENST00000546279 SPINK5Q9NQ38 1064 aaPredicted RBP14.45□□□□□ -0.1
LMO3-233ENST00000546279 LRRC37A3O60309 1634 aa14.44□□□□□ -0.1
LMO3-233ENST00000546279 PKD1L3Q7Z443 1732 aa14.44□□□□□ -0.1
LMO3-233ENST00000546279 ZBTB7CA1YPR0 619 aa14.44□□□□□ -0.1
LMO3-233ENST00000546279 AMPHP49418 695 aa14.44□□□□□ -0.1
LMO3-233ENST00000546279 CNGB1Q14028 1251 aaPredicted RBP14.44□□□□□ -0.1
LMO3-233ENST00000546279 EIF4A2Q14240 407 aaKnown RBP14.44□□□□□ -0.1
LMO3-233ENST00000546279 ANKRD24Q8TF21 1146 aa14.44□□□□□ -0.1
LMO3-233ENST00000546279 BCL11BQ9C0K0 894 aaPredicted RBP14.43□□□□□ -0.1
LMO3-233ENST00000546279 IL13P35225 146 aa14.42□□□□□ -0.1
LMO3-233ENST00000546279 MYBBP1AQ9BQG0 1328 aaKnown RBP14.41□□□□□ -0.1
LMO3-233ENST00000546279 OVOS2A0A0G2JMS6 1433 aa14.41□□□□□ -0.1
LMO3-233ENST00000546279 ZBTB7AO95365 584 aa14.41□□□□□ -0.1
LMO3-233ENST00000546279 NBPF6Q5VWK0 638 aa14.41□□□□□ -0.1
LMO3-233ENST00000546279 NBPF4Q96M43 638 aa14.41□□□□□ -0.1
LMO3-233ENST00000546279 SYT17Q9BSW7 474 aa14.41□□□□□ -0.1
LMO3-233ENST00000546279 CARD10Q9BWT7 1032 aa14.41□□□□□ -0.1
LMO3-233ENST00000546279 IGSF1Q8N6C5 1336 aa14.41□□□□□ -0.1
LMO3-233ENST00000546279 RGPD3A6NKT7 1758 aaPredicted RBP14.4□□□□□ -0.1
LMO3-233ENST00000546279 RGPD4Q7Z3J3 1758 aa14.4□□□□□ -0.1
LMO3-233ENST00000546279 KDRP35968 1356 aa14.4□□□□□ -0.1
LMO3-233ENST00000546279 PTGER2P43116 358 aa14.4□□□□□ -0.1
LMO3-233ENST00000546279 EYA1Q99502 592 aa14.4□□□□□ -0.1
LMO3-233ENST00000546279 MEGF6O75095 1541 aa14.4□□□□□ -0.1
LMO3-233ENST00000546279 PPM1GO15355 546 aaPredicted RBP14.39□□□□□ -0.11
LMO3-233ENST00000546279 CCDC184Q52MB2 194 aa14.39□□□□□ -0.11
LMO3-233ENST00000546279 FHDC1Q9C0D6 1143 aaPredicted RBP14.39□□□□□ -0.11
LMO3-233ENST00000546279 ANO8Q9HCE9 1232 aaPredicted RBP14.39□□□□□ -0.11
LMO3-233ENST00000546279 STK32BQ9NY57 414 aa14.39□□□□□ -0.11
LMO3-233ENST00000546279 VIRMAQ69YN4 1812 aaKnown RBP14.38□□□□□ -0.11
LMO3-233ENST00000546279 LTV1Q96GA3 475 aaPredicted RBP14.38□□□□□ -0.11
LMO3-233ENST00000546279 MTFR1LQ9H019 292 aa14.38□□□□□ -0.11
LMO3-233ENST00000546279 CASZ1Q86V15 1759 aa14.37□□□□□ -0.11
LMO3-233ENST00000546279 SBF2Q86WG5 1849 aa14.37□□□□□ -0.11
LMO3-233ENST00000546279 GIGYF1O75420 1035 aaPredicted RBP14.37□□□□□ -0.11
LMO3-233ENST00000546279 DDB1Q16531 1140 aa14.37□□□□□ -0.11
LMO3-233ENST00000546279 CHD4Q14839 1912 aa14.37□□□□□ -0.11
LMO3-233ENST00000546279 CAPN15O75808 1086 aa14.36□□□□□ -0.11
LMO3-233ENST00000546279 TOM1L2Q6ZVM7 507 aa14.36□□□□□ -0.11
LMO3-233ENST00000546279 SLC15A2Q16348 729 aa14.35□□□□□ -0.11
LMO3-233ENST00000546279 AEBP1Q8IUX7 1158 aa14.35□□□□□ -0.11
LMO3-233ENST00000546279 USHBP1Q8N6Y0 703 aa14.35□□□□□ -0.11
LMO3-233ENST00000546279 CDCA7Q9BWT1 371 aaPredicted RBP14.35□□□□□ -0.11
LMO3-233ENST00000546279 PDGFDQ9GZP0 370 aaPredicted RBP14.35□□□□□ -0.11
LMO3-233ENST00000546279 ZNF219Q9P2Y4 722 aaPredicted RBP14.35□□□□□ -0.11
LMO3-233ENST00000546279 DLG5Q8TDM6 1919 aa14.35□□□□□ -0.11
LMO3-233ENST00000546279 ADAMTS7Q9UKP4 1686 aa14.34□□□□□ -0.11
LMO3-233ENST00000546279 DIAPH1O60610 1272 aaKnown RBP14.34□□□□□ -0.11
LMO3-233ENST00000546279 PROM2Q8N271 834 aa14.34□□□□□ -0.11
LMO3-233ENST00000546279 NLRP2Q9NX02 1062 aa14.34□□□□□ -0.11
LMO3-233ENST00000546279 TOGARAM1Q9Y4F4 1720 aa14.34□□□□□ -0.11
LMO3-233ENST00000546279 PLEKHG2Q9H7P9 1386 aa14.34□□□□□ -0.11
LMO3-233ENST00000546279 BCL9O00512 1426 aa14.33□□□□□ -0.11
LMO3-233ENST00000546279 CSB-PGBD3P0DP91 1061 aa14.33□□□□□ -0.12
LMO3-233ENST00000546279 DIEXFQ68CQ4 756 aaKnown RBP14.33□□□□□ -0.12
LMO3-233ENST00000546279 ARXQ96QS3 562 aa14.33□□□□□ -0.12
LMO3-233ENST00000546279 MAP3K5Q99683 1374 aa14.33□□□□□ -0.12
LMO3-233ENST00000546279 TNS2Q63HR2 1409 aa14.32□□□□□ -0.12
LMO3-233ENST00000546279 UTRNP46939 3433 aa14.32□□□□□ -0.12
LMO3-233ENST00000546279 ANP32CO43423 234 aa14.32□□□□□ -0.12
LMO3-233ENST00000546279 GPR162Q16538 588 aa14.32□□□□□ -0.12
LMO3-233ENST00000546279 TXNRD1Q16881 649 aa14.32□□□□□ -0.12
LMO3-233ENST00000546279 SGIP1Q9BQI5 828 aa14.31□□□□□ -0.12
LMO3-233ENST00000546279 SCN11AQ9UI33 1791 aa14.3□□□□□ -0.12
LMO3-233ENST00000546279 RSPH6AQ9H0K4 717 aa14.3□□□□□ -0.12
LMO3-233ENST00000546279 ITGB4P16144 1822 aa14.29□□□□□ -0.12
LMO3-233ENST00000546279 IL2RBP14784 551 aa14.29□□□□□ -0.12
LMO3-233ENST00000546279 CFAP53Q96M91 514 aa14.29□□□□□ -0.12
LMO3-233ENST00000546279 DOT1LQ8TEK3 1739 aa14.29□□□□□ -0.12
LMO3-233ENST00000546279 SULT6B1Q6IMI4 303 aa14.28□□□□□ -0.12
LMO3-233ENST00000546279 PTF1AQ7RTS3 328 aa14.28□□□□□ -0.12
LMO3-233ENST00000546279 MARCH10Q8NA82 808 aaPredicted RBP14.28□□□□□ -0.12
LMO3-233ENST00000546279 PNISRQ8TF01 805 aaKnown RBP14.28□□□□□ -0.12
LMO3-233ENST00000546279 SIPA1L3O60292 1781 aaPredicted RBP14.27□□□□□ -0.12
LMO3-233ENST00000546279 HMOX1P09601 288 aa14.27□□□□□ -0.13
LMO3-233ENST00000546279 MIER1Q8N108 512 aa14.27□□□□□ -0.13
LMO3-233ENST00000546279 PLEKHF1Q96S99 279 aa14.27□□□□□ -0.13
LMO3-233ENST00000546279 NHSQ6T4R5 1651 aa14.26□□□□□ -0.13
LMO3-233ENST00000546279 EXOC5O00471 708 aa14.26□□□□□ -0.13
LMO3-233ENST00000546279 CYP27B1O15528 508 aa14.25□□□□□ -0.13
LMO3-233ENST00000546279 PHACTR3Q96KR7 559 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms