RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 NUDCQ9Y266 331 aa27.87■■■□□ 2.05
SCARB1-211ENST00000546215 HMOX1P09601 288 aa27.86■■■□□ 2.05
SCARB1-211ENST00000546215 FAM182BQ5T319 152 aa27.86■■■□□ 2.05
SCARB1-211ENST00000546215 ZCRB1Q8TBF4 217 aaKnown RBP27.86■■■□□ 2.05
SCARB1-211ENST00000546215 MARCH10Q8NA82 808 aaPredicted RBP27.85■■■□□ 2.05
SCARB1-211ENST00000546215 PLEKHG2Q9H7P9 1386 aa27.82■■■□□ 2.04
SCARB1-211ENST00000546215 SHANK3Q9BYB0 1731 aa27.82■■■□□ 2.04
SCARB1-211ENST00000546215 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.82■■■□□ 2.04
SCARB1-211ENST00000546215 U2AF1L5P0DN76 240 aaPredicted RBP27.8■■■□□ 2.04
SCARB1-211ENST00000546215 U2AF1Q01081 240 aaKnown RBP eCLIP27.8■■■□□ 2.043e-14■■□□□ 13.6
SCARB1-211ENST00000546215 PKD1L3Q7Z443 1732 aa27.8■■■□□ 2.04
SCARB1-211ENST00000546215 DDX54Q8TDD1 881 aaKnown RBP27.8■■■□□ 2.04
SCARB1-211ENST00000546215 FAM196AQ6ZSG2 479 aa27.78■■■□□ 2.04
SCARB1-211ENST00000546215 SPG7Q9UQ90 795 aa27.78■■■□□ 2.04
SCARB1-211ENST00000546215 CCDC184Q52MB2 194 aa27.77■■■□□ 2.04
SCARB1-211ENST00000546215 RSPH6AQ9H0K4 717 aa27.77■■■□□ 2.04
SCARB1-211ENST00000546215 PCDH11XQ9BZA7 1347 aa27.76■■■□□ 2.03
SCARB1-211ENST00000546215 PCDH11YQ9BZA8 1340 aa27.76■■■□□ 2.03
SCARB1-211ENST00000546215 CYP27B1O15528 508 aa27.76■■■□□ 2.03
SCARB1-211ENST00000546215 PLEKHO1Q53GL0 409 aaPredicted RBP27.76■■■□□ 2.03
SCARB1-211ENST00000546215 BCL9O00512 1426 aa27.76■■■□□ 2.03
SCARB1-211ENST00000546215 FCHSD2O94868 740 aa27.75■■■□□ 2.03
SCARB1-211ENST00000546215 DIEXFQ68CQ4 756 aaKnown RBP27.75■■■□□ 2.03
SCARB1-211ENST00000546215 AMOTQ4VCS5 1084 aa27.74■■■□□ 2.03
SCARB1-211ENST00000546215 PRKAR2BP31323 418 aa27.72■■■□□ 2.03
SCARB1-211ENST00000546215 UPF1Q92900 1129 aaKnown RBP eCLIP27.71■■■□□ 2.039e-8■■■□□ 18.4
SCARB1-211ENST00000546215 SOCS7O14512 581 aa27.69■■■□□ 2.02
SCARB1-211ENST00000546215 PHKG2P15735 406 aa27.69■■■□□ 2.02
SCARB1-211ENST00000546215 IFNL2Q8IZJ0 200 aa27.69■■■□□ 2.02
SCARB1-211ENST00000546215 SBF2Q86WG5 1849 aa27.69■■■□□ 2.02
SCARB1-211ENST00000546215 ZNF530Q6P9A1 599 aaPredicted RBP27.69■■■□□ 2.02
SCARB1-211ENST00000546215 PHACTR3Q96KR7 559 aa27.69■■■□□ 2.02
SCARB1-211ENST00000546215 NKX1-1Q15270 411 aaPredicted RBP27.68■■■□□ 2.02
SCARB1-211ENST00000546215 MTHFSDQ2M296 383 aaKnown RBP27.68■■■□□ 2.02
SCARB1-211ENST00000546215 TRIM37O94972 964 aa27.67■■■□□ 2.02
SCARB1-211ENST00000546215 MRS2Q9HD23 443 aa27.67■■■□□ 2.02
SCARB1-211ENST00000546215 WDR43Q15061 677 aaKnown RBP eCLIP27.66■■■□□ 2.028e-6■■□□□ 11.7
SCARB1-211ENST00000546215 PLEKHF1Q96S99 279 aa27.66■■■□□ 2.02
SCARB1-211ENST00000546215 KAT6BQ8WYB5 2073 aa27.66■■■□□ 2.02
SCARB1-211ENST00000546215 ADAMTS8Q9UP79 889 aa27.65■■■□□ 2.02
SCARB1-211ENST00000546215 CCDC125Q86Z20 511 aa27.64■■■□□ 2.01
SCARB1-211ENST00000546215 ACSBG1Q96GR2 724 aa27.64■■■□□ 2.01
SCARB1-211ENST00000546215 KCNQ2O43526 872 aa27.63■■■□□ 2.01
SCARB1-211ENST00000546215 C1orf141Q5JVX7 400 aa27.63■■■□□ 2.01
SCARB1-211ENST00000546215 PTF1AQ7RTS3 328 aa27.63■■■□□ 2.01
SCARB1-211ENST00000546215 PNNQ9H307 717 aaKnown RBP27.63■■■□□ 2.01
SCARB1-211ENST00000546215 AKAP4Q5JQC9 854 aa27.62■■■□□ 2.01
SCARB1-211ENST00000546215 PNISRQ8TF01 805 aaKnown RBP27.62■■■□□ 2.01
SCARB1-211ENST00000546215 GAS2L2Q8NHY3 880 aa27.61■■■□□ 2.01
SCARB1-211ENST00000546215 BCL11BQ9C0K0 894 aaPredicted RBP27.61■■■□□ 2.01
SCARB1-211ENST00000546215 HSP90AB1P08238 724 aaKnown RBP27.6■■■□□ 2.01
SCARB1-211ENST00000546215 DOT1LQ8TEK3 1739 aa27.6■■■□□ 2.01
SCARB1-211ENST00000546215 NHSQ6T4R5 1651 aa27.59■■■□□ 2.01
SCARB1-211ENST00000546215 PRIM1P49642 420 aaKnown RBP27.59■■■□□ 2.01
SCARB1-211ENST00000546215 DCAF5Q96JK2 942 aa27.59■■■□□ 2.01
SCARB1-211ENST00000546215 TNS1Q9HBL0 1735 aaKnown RBP27.58■■■□□ 2.01
SCARB1-211ENST00000546215 TOGARAM1Q9Y4F4 1720 aa27.58■■■□□ 2.01
SCARB1-211ENST00000546215 KDM6AO15550 1401 aaPredicted RBP27.57■■■□□ 2
SCARB1-211ENST00000546215 NEFMP07197 916 aa27.57■■■□□ 2
SCARB1-211ENST00000546215 SF3B2Q13435 895 aaKnown RBP27.56■■■□□ 2
SCARB1-211ENST00000546215 MPRIPQ6WCQ1 1025 aa27.56■■■□□ 2
SCARB1-211ENST00000546215 MIER1Q8N108 512 aa27.56■■■□□ 2
SCARB1-211ENST00000546215 SYTL4Q96C24 671 aaPredicted RBP27.56■■■□□ 2
SCARB1-211ENST00000546215 CCDC146Q8IYE0 955 aa27.55■■■□□ 2
SCARB1-211ENST00000546215 MAPK8IP3Q9UPT6 1336 aa27.54■■■□□ 2
SCARB1-211ENST00000546215 CCER2I3L3R5 266 aa27.54■■■□□ 2
SCARB1-211ENST00000546215 APBA3O96018 575 aa27.54■■■□□ 2
SCARB1-211ENST00000546215 RUNDC1Q96C34 613 aa27.54■■■□□ 2
SCARB1-211ENST00000546215 MAP3K5Q99683 1374 aa27.53■■■□□ 2
SCARB1-211ENST00000546215 GNAT3A8MTJ3 354 aa27.53■■■□□ 2
SCARB1-211ENST00000546215 LGR6Q9HBX8 967 aa27.53■■■□□ 2
SCARB1-211ENST00000546215 ITGB4P16144 1822 aa27.53■■■□□ 2
SCARB1-211ENST00000546215 ERVV-2B6SEH9 535 aa27.52■■■□□ 2
SCARB1-211ENST00000546215 SCN11AQ9UI33 1791 aa27.52■■■□□ 2
SCARB1-211ENST00000546215 DEFB132Q7Z7B7 95 aa27.52■■■□□ 2
SCARB1-211ENST00000546215 BTAF1O14981 1849 aa27.51■■□□□ 1.99
SCARB1-211ENST00000546215 RNMTO43148 476 aaKnown RBP27.51■■□□□ 1.99
SCARB1-211ENST00000546215 NFE2L2Q16236 605 aa27.51■■□□□ 1.99
SCARB1-211ENST00000546215 ADAMTS7Q9UKP4 1686 aa27.5■■□□□ 1.99
SCARB1-211ENST00000546215 BAG6P46379 1132 aa27.5■■□□□ 1.99
SCARB1-211ENST00000546215 VIRMAQ69YN4 1812 aaKnown RBP27.49■■□□□ 1.99
SCARB1-211ENST00000546215 IL17REQ8NFR9 667 aa27.49■■□□□ 1.99
SCARB1-211ENST00000546215 PIGBQ92521 554 aa27.49■■□□□ 1.99
SCARB1-211ENST00000546215 PLSCR1O15162 318 aa27.48■■□□□ 1.99
SCARB1-211ENST00000546215 DLG5Q8TDM6 1919 aa27.48■■□□□ 1.99
SCARB1-211ENST00000546215 TMPOP42166 694 aaKnown RBP27.48■■□□□ 1.99
SCARB1-211ENST00000546215 EN1Q05925 392 aaPredicted RBP27.48■■□□□ 1.99
SCARB1-211ENST00000546215 TMOD3Q9NYL9 352 aa27.48■■□□□ 1.99
SCARB1-211ENST00000546215 HTATSF1O43719 755 aaKnown RBP27.46■■□□□ 1.99
SCARB1-211ENST00000546215 CABP4P57796 275 aa27.46■■□□□ 1.99
SCARB1-211ENST00000546215 CAMKK2Q96RR4 588 aa27.46■■□□□ 1.99
SCARB1-211ENST00000546215 CEMIPQ8WUJ3 1361 aa27.45■■□□□ 1.99
SCARB1-211ENST00000546215 FAM9BQ8IZU0 186 aa27.45■■□□□ 1.99
SCARB1-211ENST00000546215 NFATC2IPQ8NCF5 419 aa27.45■■□□□ 1.99
SCARB1-211ENST00000546215 RTF1Q92541 710 aaKnown RBP27.44■■□□□ 1.98
SCARB1-211ENST00000546215 SLC52A2Q9HAB3 445 aa27.44■■□□□ 1.98
SCARB1-211ENST00000546215 MRC1P22897 1456 aa27.44■■□□□ 1.98
SCARB1-211ENST00000546215 RIPK4P57078 832 aa27.43■■□□□ 1.98
SCARB1-211ENST00000546215 MCM10Q7L590 875 aa27.43■■□□□ 1.98
SCARB1-211ENST00000546215 DCTN1Q14203 1278 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms