RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 REC8O95072 547 aa17.39■□□□□ 0.37
SRP54-202ENST00000546080 C8orf58Q8NAV2 365 aa17.39■□□□□ 0.37
SRP54-202ENST00000546080 ANKRD44Q8N8A2 993 aa17.39■□□□□ 0.37
SRP54-202ENST00000546080 YTHDC2Q9H6S0 1430 aaKnown RBP17.38■□□□□ 0.37
SRP54-202ENST00000546080 MBD3O95983 291 aa17.38■□□□□ 0.37
SRP54-202ENST00000546080 LMOD3Q0VAK6 560 aa17.38■□□□□ 0.37
SRP54-202ENST00000546080 OTUD7AQ8TE49 926 aaPredicted RBP17.38■□□□□ 0.37
SRP54-202ENST00000546080 CABP1Q9NZU7 370 aa17.38■□□□□ 0.37
SRP54-202ENST00000546080 DYNC1I1O14576 645 aa17.38■□□□□ 0.37
SRP54-202ENST00000546080 FBLN1P23142 703 aa17.38■□□□□ 0.37
SRP54-202ENST00000546080 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.38■□□□□ 0.375e-7■■□□□ 13.5
SRP54-202ENST00000546080 ASXL2Q76L83 1435 aa17.37■□□□□ 0.37
SRP54-202ENST00000546080 MTERF4Q7Z6M4 381 aaKnown RBP17.37■□□□□ 0.37
SRP54-202ENST00000546080 POGZQ7Z3K3 1410 aa17.37■□□□□ 0.37
SRP54-202ENST00000546080 ATP10DQ9P241 1426 aa17.37■□□□□ 0.37
SRP54-202ENST00000546080 MLH3Q9UHC1 1453 aa17.37■□□□□ 0.37
SRP54-202ENST00000546080 CDK19Q9BWU1 502 aa17.36■□□□□ 0.37
SRP54-202ENST00000546080 SASS6Q6UVJ0 657 aa17.36■□□□□ 0.37
SRP54-202ENST00000546080 RPAP2Q8IXW5 612 aaPredicted RBP17.36■□□□□ 0.37
SRP54-202ENST00000546080 ERC2O15083 957 aa17.35■□□□□ 0.37
SRP54-202ENST00000546080 NPM1P06748 294 aaKnown RBP eCLIP17.35■□□□□ 0.37
SRP54-202ENST00000546080 FOXD4L5Q5VV16 416 aaPredicted RBP17.35■□□□□ 0.37
SRP54-202ENST00000546080 FOXD4L4Q8WXT5 416 aaPredicted RBP17.35■□□□□ 0.37
SRP54-202ENST00000546080 CHAMP1Q96JM3 812 aa17.35■□□□□ 0.37
SRP54-202ENST00000546080 NSFL1CQ9UNZ2 370 aaKnown RBP17.35■□□□□ 0.37
SRP54-202ENST00000546080 RIMS2Q9UQ26 1411 aa17.35■□□□□ 0.37
SRP54-202ENST00000546080 APBB1O00213 710 aa17.35■□□□□ 0.37
SRP54-202ENST00000546080 SMARCA5O60264 1052 aaPredicted RBP17.35■□□□□ 0.37
SRP54-202ENST00000546080 CEP85Q6P2H3 762 aa17.35■□□□□ 0.37
SRP54-202ENST00000546080 IDI1Q13907 227 aa17.34■□□□□ 0.37
SRP54-202ENST00000546080 RNF214Q8ND24 703 aa17.34■□□□□ 0.37
SRP54-202ENST00000546080 PTMAP06454 111 aaKnown RBP17.33■□□□□ 0.37
SRP54-202ENST00000546080 IL13P35225 146 aa17.33■□□□□ 0.36
SRP54-202ENST00000546080 ARHGEF40Q8TER5 1519 aa17.33■□□□□ 0.36
SRP54-202ENST00000546080 TSPY26PQ9H489 355 aa17.32■□□□□ 0.36
SRP54-202ENST00000546080 EMILIN1Q9Y6C2 1016 aa17.32■□□□□ 0.36
SRP54-202ENST00000546080 TMX3Q96JJ7 454 aa17.32■□□□□ 0.36
SRP54-202ENST00000546080 MAP2P11137 1827 aaKnown RBP17.32■□□□□ 0.36
SRP54-202ENST00000546080 MSH6P52701 1360 aa17.31■□□□□ 0.36
SRP54-202ENST00000546080 FAM83GA6ND36 823 aa17.31■□□□□ 0.36
SRP54-202ENST00000546080 MCM2P49736 904 aa17.31■□□□□ 0.36
SRP54-202ENST00000546080 NEK4P51957 841 aa17.31■□□□□ 0.36
SRP54-202ENST00000546080 SYAP1Q96A49 352 aaPredicted RBP17.31■□□□□ 0.36
SRP54-202ENST00000546080 DLG5Q8TDM6 1919 aa17.31■□□□□ 0.36
SRP54-202ENST00000546080 KIAA2012Q0VF49 1180 aa17.3■□□□□ 0.36
SRP54-202ENST00000546080 RTL1A6NKG5 1358 aa17.3■□□□□ 0.36
SRP54-202ENST00000546080 ATP7BP35670 1465 aa17.3■□□□□ 0.36
SRP54-202ENST00000546080 CDK12Q9NYV4 1490 aaPredicted RBP17.3■□□□□ 0.36
SRP54-202ENST00000546080 BRD1O95696 1058 aa17.3■□□□□ 0.36
SRP54-202ENST00000546080 HAP1P54257 671 aaPredicted RBP17.3■□□□□ 0.36
SRP54-202ENST00000546080 CPSF1Q10570 1443 aaKnown RBP17.3■□□□□ 0.36
SRP54-202ENST00000546080 DCTN1Q14203 1278 aa17.29■□□□□ 0.36
SRP54-202ENST00000546080 SLC52A1Q9NWF4 448 aa17.29■□□□□ 0.36
SRP54-202ENST00000546080 RGS12O14924 1447 aa17.29■□□□□ 0.36
SRP54-202ENST00000546080 MYO5BQ9ULV0 1848 aa17.28■□□□□ 0.36
SRP54-202ENST00000546080 PHF14O94880 888 aa17.28■□□□□ 0.36
SRP54-202ENST00000546080 MEIS3Q99687 375 aa17.28■□□□□ 0.36
SRP54-202ENST00000546080 ARID3AQ99856 593 aa17.28■□□□□ 0.36
SRP54-202ENST00000546080 PRDM4Q9UKN5 801 aa17.28■□□□□ 0.36
SRP54-202ENST00000546080 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.28■□□□□ 0.36
SRP54-202ENST00000546080 HMMRO75330 724 aa17.27■□□□□ 0.36
SRP54-202ENST00000546080 MCCP23508 829 aa17.27■□□□□ 0.36
SRP54-202ENST00000546080 CUL4AQ13619 759 aa17.26■□□□□ 0.35
SRP54-202ENST00000546080 SMAP1Q8IYB5 467 aaPredicted RBP17.26■□□□□ 0.35
SRP54-202ENST00000546080 PTPRCP08575 1304 aa17.26■□□□□ 0.35
SRP54-202ENST00000546080 PDE1AP54750 535 aa17.26■□□□□ 0.35
SRP54-202ENST00000546080 DNTTIP2Q5QJE6 756 aaKnown RBP17.26■□□□□ 0.35
SRP54-202ENST00000546080 OSBPL3Q9H4L5 887 aa17.26■□□□□ 0.35
SRP54-202ENST00000546080 TMEM131LA2VDJ0 1609 aa17.25■□□□□ 0.35
SRP54-202ENST00000546080 INTS4Q96HW7 963 aaKnown RBP17.25■□□□□ 0.35
SRP54-202ENST00000546080 ALKQ9UM73 1620 aa17.24■□□□□ 0.35
SRP54-202ENST00000546080 KRT24Q2M2I5 525 aa17.24■□□□□ 0.35
SRP54-202ENST00000546080 EDC4Q6P2E9 1401 aaKnown RBP17.24■□□□□ 0.35
SRP54-202ENST00000546080 NOL8Q76FK4 1167 aaKnown RBP17.23■□□□□ 0.35
SRP54-202ENST00000546080 NME9Q86XW9 330 aa17.23■□□□□ 0.35
SRP54-202ENST00000546080 MYRIPQ8NFW9 859 aa17.23■□□□□ 0.35
SRP54-202ENST00000546080 ESYT1Q9BSJ8 1104 aa17.23■□□□□ 0.35
SRP54-202ENST00000546080 AATKQ6ZMQ8 1374 aa17.23■□□□□ 0.35
SRP54-202ENST00000546080 FAM184AQ8NB25 1140 aa17.22■□□□□ 0.35
SRP54-202ENST00000546080 ANAPC15P60006 121 aa17.22■□□□□ 0.35
SRP54-202ENST00000546080 UVSSAQ2YD98 709 aa17.22■□□□□ 0.35
SRP54-202ENST00000546080 ZBTB7CA1YPR0 619 aa17.21■□□□□ 0.35
SRP54-202ENST00000546080 RRS1Q15050 365 aaKnown RBP17.21■□□□□ 0.35
SRP54-202ENST00000546080 FOXD4L6Q3SYB3 417 aaPredicted RBP17.21■□□□□ 0.35
SRP54-202ENST00000546080 FOXD4L3Q6VB84 417 aaPredicted RBP17.21■□□□□ 0.35
SRP54-202ENST00000546080 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.21■□□□□ 0.35
SRP54-202ENST00000546080 CCDC94Q9BW85 323 aaPredicted RBP17.21■□□□□ 0.35
SRP54-202ENST00000546080 GADD45BO75293 160 aaPredicted RBP17.21■□□□□ 0.34
SRP54-202ENST00000546080 PIBF1Q8WXW3 757 aa17.21■□□□□ 0.34
SRP54-202ENST00000546080 PRIMPOLQ96LW4 560 aa17.21■□□□□ 0.34
SRP54-202ENST00000546080 GDPD2Q9HCC8 539 aa17.21■□□□□ 0.34
SRP54-202ENST00000546080 ANO2Q9NQ90 1003 aa17.21■□□□□ 0.34
SRP54-202ENST00000546080 ZRANB1Q9UGI0 708 aa17.21■□□□□ 0.34
SRP54-202ENST00000546080 PALD1Q9ULE6 856 aa17.21■□□□□ 0.34
SRP54-202ENST00000546080 KIAA0232Q92628 1395 aa17.2■□□□□ 0.34
SRP54-202ENST00000546080 COG3Q96JB2 828 aa17.2■□□□□ 0.34
SRP54-202ENST00000546080 PREX1Q8TCU6 1659 aa17.2■□□□□ 0.34
SRP54-202ENST00000546080 HMGN5P82970 282 aaKnown RBP17.19■□□□□ 0.34
SRP54-202ENST00000546080 TSHZ3Q63HK5 1081 aa17.19■□□□□ 0.34
SRP54-202ENST00000546080 USP48Q86UV5 1035 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms