RNA–Protein interactions for RNA: ENST00000545868.4

GABRB3-205, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 1,267 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-205ENST00000545868 DDB1Q16531 1140 aa13.79□□□□□ -0.2
GABRB3-205ENST00000545868 TTC21AQ8NDW8 1320 aa13.79□□□□□ -0.2
GABRB3-205ENST00000545868 CHD4Q14839 1912 aa13.78□□□□□ -0.2
GABRB3-205ENST00000545868 TNS2Q63HR2 1409 aa13.78□□□□□ -0.2
GABRB3-205ENST00000545868 PLSCR1O15162 318 aa13.77□□□□□ -0.21
GABRB3-205ENST00000545868 QSER1Q2KHR3 1735 aa13.77□□□□□ -0.21
GABRB3-205ENST00000545868 USP31Q70CQ4 1352 aa13.77□□□□□ -0.21
GABRB3-205ENST00000545868 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.77□□□□□ -0.21
GABRB3-205ENST00000545868 NBPF14Q5TI25 921 aa13.76□□□□□ -0.21
GABRB3-205ENST00000545868 KCNH5Q8NCM2 988 aa13.76□□□□□ -0.21
GABRB3-205ENST00000545868 CARD10Q9BWT7 1032 aa13.76□□□□□ -0.21
GABRB3-205ENST00000545868 PDGFDQ9GZP0 370 aaPredicted RBP13.76□□□□□ -0.21
GABRB3-205ENST00000545868 DOT1LQ8TEK3 1739 aa13.76□□□□□ -0.21
GABRB3-205ENST00000545868 C11orf95C9JLR9 678 aaPredicted RBP13.75□□□□□ -0.21
GABRB3-205ENST00000545868 BCL11BQ9C0K0 894 aaPredicted RBP13.75□□□□□ -0.21
GABRB3-205ENST00000545868 COL24A1Q17RW2 1714 aa13.75□□□□□ -0.21
GABRB3-205ENST00000545868 LY75O60449 1722 aa13.74□□□□□ -0.21
GABRB3-205ENST00000545868 NME9Q86XW9 330 aa13.74□□□□□ -0.21
GABRB3-205ENST00000545868 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.74□□□□□ -0.21
GABRB3-205ENST00000545868 KIF20BQ96Q89 1820 aa13.74□□□□□ -0.21
GABRB3-205ENST00000545868 CCDC7Q96M83 1385 aa13.73□□□□□ -0.21
GABRB3-205ENST00000545868 ERBB3P21860 1342 aa13.73□□□□□ -0.21
GABRB3-205ENST00000545868 KCNQ2O43526 872 aa13.73□□□□□ -0.21
GABRB3-205ENST00000545868 CHRM1P11229 460 aaPredicted RBP13.73□□□□□ -0.21
GABRB3-205ENST00000545868 CDCA7Q9BWT1 371 aaPredicted RBP13.73□□□□□ -0.21
GABRB3-205ENST00000545868 EDC4Q6P2E9 1401 aaKnown RBP13.73□□□□□ -0.21
GABRB3-205ENST00000545868 A0A1W2PP64 1363 aa13.72□□□□□ -0.21
GABRB3-205ENST00000545868 CSB-PGBD3P0DP91 1061 aa13.72□□□□□ -0.21
GABRB3-205ENST00000545868 SPON1Q9HCB6 807 aa13.72□□□□□ -0.21
GABRB3-205ENST00000545868 FXR2P51116 673 aaKnown RBP eCLIP13.71□□□□□ -0.21
GABRB3-205ENST00000545868 CARD11Q9BXL7 1154 aa13.71□□□□□ -0.21
GABRB3-205ENST00000545868 SLC12A5Q9H2X9 1139 aa13.71□□□□□ -0.21
GABRB3-205ENST00000545868 FARP1Q9Y4F1 1045 aaPredicted RBP13.71□□□□□ -0.21
GABRB3-205ENST00000545868 GOLGB1Q14789 3259 aaKnown RBP13.71□□□□□ -0.22
GABRB3-205ENST00000545868 NINLQ9Y2I6 1382 aa13.71□□□□□ -0.22
GABRB3-205ENST00000545868 RIOK3O14730 519 aaKnown RBP13.7□□□□□ -0.22
GABRB3-205ENST00000545868 HS6ST3Q8IZP7 471 aa13.7□□□□□ -0.22
GABRB3-205ENST00000545868 PRKAR2AP13861 404 aaKnown RBP13.69□□□□□ -0.22
GABRB3-205ENST00000545868 TXNRD1Q16881 649 aa13.69□□□□□ -0.22
GABRB3-205ENST00000545868 PAXIP1Q6ZW49 1069 aaPredicted RBP13.69□□□□□ -0.22
GABRB3-205ENST00000545868 TAF1LQ8IZX4 1826 aa13.69□□□□□ -0.22
GABRB3-205ENST00000545868 EXOC5O00471 708 aa13.68□□□□□ -0.22
GABRB3-205ENST00000545868 PTGER2P43116 358 aa13.68□□□□□ -0.22
GABRB3-205ENST00000545868 ITGB4P16144 1822 aa13.67□□□□□ -0.22
GABRB3-205ENST00000545868 ZBTB7AO95365 584 aa13.67□□□□□ -0.22
GABRB3-205ENST00000545868 TMC1Q8TDI8 760 aa13.67□□□□□ -0.22
GABRB3-205ENST00000545868 ACSBG1Q96GR2 724 aa13.67□□□□□ -0.22
GABRB3-205ENST00000545868 PPP1R1BQ9UD71 204 aaPredicted RBP13.67□□□□□ -0.22
GABRB3-205ENST00000545868 ANKRD24Q8TF21 1146 aa13.66□□□□□ -0.22
GABRB3-205ENST00000545868 TESK2Q96S53 571 aa13.66□□□□□ -0.22
GABRB3-205ENST00000545868 NLRP2Q9NX02 1062 aa13.66□□□□□ -0.22
GABRB3-205ENST00000545868 IL2RBP14784 551 aa13.65□□□□□ -0.22
GABRB3-205ENST00000545868 SLC15A2Q16348 729 aa13.65□□□□□ -0.22
GABRB3-205ENST00000545868 HDGFL2Q7Z4V5 671 aaPredicted RBP13.65□□□□□ -0.22
GABRB3-205ENST00000545868 CFAP44Q96MT7 982 aa13.65□□□□□ -0.22
GABRB3-205ENST00000545868 TONSLQ96HA7 1378 aa13.65□□□□□ -0.22
GABRB3-205ENST00000545868 TOGARAM1Q9Y4F4 1720 aa13.64□□□□□ -0.23
GABRB3-205ENST00000545868 MAP2P11137 1827 aaKnown RBP13.64□□□□□ -0.23
GABRB3-205ENST00000545868 PYGBP11216 843 aa13.64□□□□□ -0.23
GABRB3-205ENST00000545868 CHRDL2Q6WN34 429 aa13.64□□□□□ -0.23
GABRB3-205ENST00000545868 SGIP1Q9BQI5 828 aa13.64□□□□□ -0.23
GABRB3-205ENST00000545868 FBLN1P23142 703 aa13.63□□□□□ -0.23
GABRB3-205ENST00000545868 YY1P25490 414 aa13.63□□□□□ -0.23
GABRB3-205ENST00000545868 STK32BQ9NY57 414 aa13.63□□□□□ -0.23
GABRB3-205ENST00000545868 TAOK2Q9UL54 1235 aa13.63□□□□□ -0.23
GABRB3-205ENST00000545868 ANKRD26Q9UPS8 1709 aa13.63□□□□□ -0.23
GABRB3-205ENST00000545868 MEGF6O75095 1541 aa13.63□□□□□ -0.23
GABRB3-205ENST00000545868 C5P01031 1676 aa13.63□□□□□ -0.23
GABRB3-205ENST00000545868 ST20-MTHFSA0A0A6YYL1 179 aa13.62□□□□□ -0.23
GABRB3-205ENST00000545868 ZNF827Q17R98 1081 aa13.62□□□□□ -0.23
GABRB3-205ENST00000545868 SPRYD3Q8NCJ5 442 aa13.62□□□□□ -0.23
GABRB3-205ENST00000545868 IP6K1Q92551 441 aa13.62□□□□□ -0.23
GABRB3-205ENST00000545868 PUS7Q96PZ0 661 aaKnown RBP13.62□□□□□ -0.23
GABRB3-205ENST00000545868 LRRC4BQ9NT99 713 aa13.62□□□□□ -0.23
GABRB3-205ENST00000545868 TERF2IPQ9NYB0 399 aa13.62□□□□□ -0.23
GABRB3-205ENST00000545868 PKD1L3Q7Z443 1732 aa13.61□□□□□ -0.23
GABRB3-205ENST00000545868 MAP3K19Q56UN5 1328 aa13.61□□□□□ -0.23
GABRB3-205ENST00000545868 NSD2O96028 1365 aa13.6□□□□□ -0.23
GABRB3-205ENST00000545868 TSPYL2Q9H2G4 693 aaPredicted RBP13.6□□□□□ -0.23
GABRB3-205ENST00000545868 HOXC9P31274 260 aa13.59□□□□□ -0.23
GABRB3-205ENST00000545868 PIP4P2Q8N4L2 257 aa13.59□□□□□ -0.23
GABRB3-205ENST00000545868 LTV1Q96GA3 475 aaPredicted RBP13.59□□□□□ -0.23
GABRB3-205ENST00000545868 FHDC1Q9C0D6 1143 aaPredicted RBP13.59□□□□□ -0.23
GABRB3-205ENST00000545868 MTFR1LQ9H019 292 aa13.59□□□□□ -0.23
GABRB3-205ENST00000545868 ANKRD36BQ8N2N9 1353 aa13.58□□□□□ -0.23
GABRB3-205ENST00000545868 UBR3Q6ZT12 1888 aa13.58□□□□□ -0.24
GABRB3-205ENST00000545868 VSIG10Q8N0Z9 540 aa13.57□□□□□ -0.24
GABRB3-205ENST00000545868 SYT17Q9BSW7 474 aa13.57□□□□□ -0.24
GABRB3-205ENST00000545868 DDX54Q8TDD1 881 aaKnown RBP13.56□□□□□ -0.24
GABRB3-205ENST00000545868 COG3Q96JB2 828 aa13.56□□□□□ -0.24
GABRB3-205ENST00000545868 RTL1A6NKG5 1358 aa13.56□□□□□ -0.24
GABRB3-205ENST00000545868 KCNQ4P56696 695 aa13.55□□□□□ -0.24
GABRB3-205ENST00000545868 RRS1Q15050 365 aaKnown RBP13.55□□□□□ -0.24
GABRB3-205ENST00000545868 USP47Q96K76 1375 aa13.55□□□□□ -0.24
GABRB3-205ENST00000545868 MAP3K5Q99683 1374 aa13.55□□□□□ -0.24
GABRB3-205ENST00000545868 PNPLA7Q6ZV29 1317 aa13.54□□□□□ -0.24
GABRB3-205ENST00000545868 STK25O00506 426 aa13.53□□□□□ -0.24
GABRB3-205ENST00000545868 FYB1O15117 783 aa13.53□□□□□ -0.24
GABRB3-205ENST00000545868 NKX1-1Q15270 411 aaPredicted RBP13.53□□□□□ -0.24
GABRB3-205ENST00000545868 NBPF6Q5VWK0 638 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms