RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 ABTB2Q8N961 1025 aa8.26□□□□□ -1.09
NECAP1-208ENST00000545807 THUMPD2Q9BTF0 503 aaKnown RBP8.26□□□□□ -1.09
NECAP1-208ENST00000545807 TTC21BQ7Z4L5 1316 aa8.26□□□□□ -1.09
NECAP1-208ENST00000545807 MAPK8IP3Q9UPT6 1336 aa8.26□□□□□ -1.09
NECAP1-208ENST00000545807 HMGB1P09429 215 aaKnown RBP8.26□□□□□ -1.09
NECAP1-208ENST00000545807 CCDC173Q0VFZ6 552 aa8.26□□□□□ -1.09
NECAP1-208ENST00000545807 SASS6Q6UVJ0 657 aa8.26□□□□□ -1.09
NECAP1-208ENST00000545807 ZNF592Q92610 1267 aa8.26□□□□□ -1.09
NECAP1-208ENST00000545807 CHMP4CQ96CF2 233 aa8.26□□□□□ -1.09
NECAP1-208ENST00000545807 PRR29P0C7W0 189 aa8.25□□□□□ -1.09
NECAP1-208ENST00000545807 CAPN2P17655 700 aa8.25□□□□□ -1.09
NECAP1-208ENST00000545807 PRKAR2BP31323 418 aa8.25□□□□□ -1.09
NECAP1-208ENST00000545807 PSME1Q06323 249 aa8.25□□□□□ -1.09
NECAP1-208ENST00000545807 HSP90AB2PQ58FF8 381 aa8.25□□□□□ -1.09
NECAP1-208ENST00000545807 RUNDC1Q96C34 613 aa8.25□□□□□ -1.09
NECAP1-208ENST00000545807 CBX1P83916 185 aa8.25□□□□□ -1.09
NECAP1-208ENST00000545807 TSR2Q969E8 191 aaKnown RBP8.25□□□□□ -1.09
NECAP1-208ENST00000545807 IGSF3O75054 1194 aa8.25□□□□□ -1.09
NECAP1-208ENST00000545807 ATP2B3Q16720 1220 aa8.25□□□□□ -1.09
NECAP1-208ENST00000545807 EXOC6Q8TAG9 804 aa8.25□□□□□ -1.09
NECAP1-208ENST00000545807 SETD1AO15047 1707 aaKnown RBP8.24□□□□□ -1.09
NECAP1-208ENST00000545807 KDM4FA0A1W2PPD8 638 aa8.24□□□□□ -1.09
NECAP1-208ENST00000545807 C8orf34Q49A92 452 aa8.24□□□□□ -1.09
NECAP1-208ENST00000545807 ZNF692Q9BU19 519 aaPredicted RBP8.24□□□□□ -1.09
NECAP1-208ENST00000545807 CPS1P31327 1500 aa8.24□□□□□ -1.09
NECAP1-208ENST00000545807 POLR3AO14802 1390 aaPredicted RBP8.24□□□□□ -1.09
NECAP1-208ENST00000545807 FAM135BQ49AJ0 1406 aa8.24□□□□□ -1.09
NECAP1-208ENST00000545807 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.24□□□□□ -1.09
NECAP1-208ENST00000545807 MCM4P33991 863 aa8.24□□□□□ -1.09
NECAP1-208ENST00000545807 AMPHP49418 695 aa8.24□□□□□ -1.09
NECAP1-208ENST00000545807 C20orf194Q5TEA3 1177 aa8.24□□□□□ -1.09
NECAP1-208ENST00000545807 PHACTR3Q96KR7 559 aa8.24□□□□□ -1.09
NECAP1-208ENST00000545807 PHF8Q9UPP1 1060 aa8.24□□□□□ -1.09
NECAP1-208ENST00000545807 NINLQ9Y2I6 1382 aa8.24□□□□□ -1.09
NECAP1-208ENST00000545807 ARHGAP23Q9P227 1491 aa8.24□□□□□ -1.09
NECAP1-208ENST00000545807 ELL2O00472 640 aaPredicted RBP8.23□□□□□ -1.09
NECAP1-208ENST00000545807 BCAR3O75815 825 aa8.23□□□□□ -1.09
NECAP1-208ENST00000545807 CSPP1Q1MSJ5 1256 aa8.23□□□□□ -1.09
NECAP1-208ENST00000545807 FAM161AQ3B820 660 aa8.23□□□□□ -1.09
NECAP1-208ENST00000545807 SIRT1Q96EB6 747 aa8.23□□□□□ -1.09
NECAP1-208ENST00000545807 CCDC66A2RUB6 948 aa8.23□□□□□ -1.09
NECAP1-208ENST00000545807 MSNP26038 577 aaKnown RBP8.23□□□□□ -1.09
NECAP1-208ENST00000545807 DCTN1Q14203 1278 aa8.23□□□□□ -1.09
NECAP1-208ENST00000545807 BECN1Q14457 450 aa8.23□□□□□ -1.09
NECAP1-208ENST00000545807 DUSP27Q5VZP5 1158 aa8.23□□□□□ -1.09
NECAP1-208ENST00000545807 ZNF710Q8N1W2 664 aa8.23□□□□□ -1.09
NECAP1-208ENST00000545807 TIGD1Q96MW7 591 aa8.23□□□□□ -1.09
NECAP1-208ENST00000545807 NPHP4O75161 1426 aaPredicted RBP8.23□□□□□ -1.09
NECAP1-208ENST00000545807 BLMP54132 1417 aaPredicted RBP8.23□□□□□ -1.09
NECAP1-208ENST00000545807 ATP7BP35670 1465 aa8.23□□□□□ -1.09
NECAP1-208ENST00000545807 TRIM6-TRIM34B2RNG4 842 aa8.23□□□□□ -1.09
NECAP1-208ENST00000545807 RRP1P56182 461 aaKnown RBP8.23□□□□□ -1.09
NECAP1-208ENST00000545807 TRIM34Q9BYJ4 488 aa8.23□□□□□ -1.09
NECAP1-208ENST00000545807 SLIT1O75093 1534 aa8.22□□□□□ -1.09
NECAP1-208ENST00000545807 DLC1Q96QB1 1528 aa8.22□□□□□ -1.09
NECAP1-208ENST00000545807 PDE3BQ13370 1112 aa8.22□□□□□ -1.09
NECAP1-208ENST00000545807 SULT6B1Q6IMI4 303 aa8.22□□□□□ -1.09
NECAP1-208ENST00000545807 TECPR2O15040 1411 aa8.22□□□□□ -1.09
NECAP1-208ENST00000545807 PLEKHG3A1L390 1219 aa8.22□□□□□ -1.09
NECAP1-208ENST00000545807 GTF2F1P35269 517 aaKnown RBP eCLIP8.22□□□□□ -1.09
NECAP1-208ENST00000545807 GABPB1Q06547 395 aaPredicted RBP8.22□□□□□ -1.09
NECAP1-208ENST00000545807 SLFN5Q08AF3 891 aa8.22□□□□□ -1.09
NECAP1-208ENST00000545807 USHBP1Q8N6Y0 703 aa8.22□□□□□ -1.09
NECAP1-208ENST00000545807 MED14O60244 1454 aa8.21□□□□□ -1.09
NECAP1-208ENST00000545807 NSD2O96028 1365 aa8.21□□□□□ -1.09
NECAP1-208ENST00000545807 LOC102724159A0A0B4J2E5 919 aa8.21□□□□□ -1.09
NECAP1-208ENST00000545807 FAM83GA6ND36 823 aa8.21□□□□□ -1.09
NECAP1-208ENST00000545807 PWP2Q15269 919 aaKnown RBP8.21□□□□□ -1.09
NECAP1-208ENST00000545807 HSP90AB3PQ58FF7 597 aa8.21□□□□□ -1.09
NECAP1-208ENST00000545807 CLUAP1Q96AJ1 413 aa8.21□□□□□ -1.09
NECAP1-208ENST00000545807 NOL7Q9UMY1 257 aaKnown RBP8.21□□□□□ -1.09
NECAP1-208ENST00000545807 KIF3AQ9Y496 699 aa8.21□□□□□ -1.09
NECAP1-208ENST00000545807 NKTRP30414 1462 aaKnown RBP8.21□□□□□ -1.1
NECAP1-208ENST00000545807 EDC4Q6P2E9 1401 aaKnown RBP8.21□□□□□ -1.1
NECAP1-208ENST00000545807 TRAK2O60296 914 aa8.21□□□□□ -1.1
NECAP1-208ENST00000545807 TMPOP42166 694 aaKnown RBP8.21□□□□□ -1.1
NECAP1-208ENST00000545807 SKAP1Q86WV1 359 aa8.21□□□□□ -1.1
NECAP1-208ENST00000545807 BANK1Q8NDB2 785 aa8.21□□□□□ -1.1
NECAP1-208ENST00000545807 SH3BP1Q9Y3L3 701 aa8.21□□□□□ -1.1
NECAP1-208ENST00000545807 ADAMTSL3P82987 1691 aa8.21□□□□□ -1.1
NECAP1-208ENST00000545807 CPSF1Q10570 1443 aaKnown RBP8.21□□□□□ -1.1
NECAP1-208ENST00000545807 RGPD8O14715 1765 aaPredicted RBP8.21□□□□□ -1.1
NECAP1-208ENST00000545807 IRF6O14896 467 aa8.2□□□□□ -1.1
NECAP1-208ENST00000545807 SETQ01105 290 aaPredicted RBP8.2□□□□□ -1.1
NECAP1-208ENST00000545807 LMOD3Q0VAK6 560 aa8.2□□□□□ -1.1
NECAP1-208ENST00000545807 MYRIPQ8NFW9 859 aa8.2□□□□□ -1.1
NECAP1-208ENST00000545807 CRBNQ96SW2 442 aa8.2□□□□□ -1.1
NECAP1-208ENST00000545807 ATF3P18847 181 aa8.2□□□□□ -1.1
NECAP1-208ENST00000545807 SATB1Q01826 763 aa8.2□□□□□ -1.1
NECAP1-208ENST00000545807 CABLES1Q8TDN4 633 aa8.2□□□□□ -1.1
NECAP1-208ENST00000545807 ZBTB9Q96C00 473 aa8.2□□□□□ -1.1
NECAP1-208ENST00000545807 MAP3K19Q56UN5 1328 aa8.2□□□□□ -1.1
NECAP1-208ENST00000545807 BRPF1P55201 1214 aaPredicted RBP8.2□□□□□ -1.1
NECAP1-208ENST00000545807 EIF4A2Q14240 407 aaKnown RBP8.2□□□□□ -1.1
NECAP1-208ENST00000545807 MCM5P33992 734 aa8.19□□□□□ -1.1
NECAP1-208ENST00000545807 ZC3H6P61129 1189 aaKnown RBP8.19□□□□□ -1.1
NECAP1-208ENST00000545807 ZNF771Q7L3S4 317 aaPredicted RBP8.19□□□□□ -1.1
NECAP1-208ENST00000545807 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.19□□□□□ -1.1
NECAP1-208ENST00000545807 TNNQ9UQP3 1299 aa8.19□□□□□ -1.1
NECAP1-208ENST00000545807 USP19O94966 1318 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms