RNA–Protein interactions for RNA: ENST00000545549.1

LINC01965-204, Transcript of long intergenic non-protein coding RNA 1965, humanhuman

TSL 4 BASIC

Gene LINC01965, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01965-204ENST00000545549 TBC1D12O60347 775 aa5.17□□□□□ -1.58
LINC01965-204ENST00000545549 EVI5O60447 810 aa5.17□□□□□ -1.58
LINC01965-204ENST00000545549 HOXB1P14653 301 aaPredicted RBP5.17□□□□□ -1.58
LINC01965-204ENST00000545549 DDX17Q92841 729 aaKnown RBP5.17□□□□□ -1.58
LINC01965-204ENST00000545549 GCC1Q96CN9 775 aa5.17□□□□□ -1.58
LINC01965-204ENST00000545549 ARXQ96QS3 562 aa5.17□□□□□ -1.58
LINC01965-204ENST00000545549 ZSWIM6Q9HCJ5 1215 aa5.17□□□□□ -1.58
LINC01965-204ENST00000545549 TBX22Q9Y458 520 aa5.17□□□□□ -1.58
LINC01965-204ENST00000545549 NRXN1Q9ULB1 1477 aa5.17□□□□□ -1.58
LINC01965-204ENST00000545549 NEXMIFQ5QGS0 1516 aa5.17□□□□□ -1.58
LINC01965-204ENST00000545549 PIK3R4Q99570 1358 aa5.16□□□□□ -1.58
LINC01965-204ENST00000545549 MST1RQ04912 1400 aa5.16□□□□□ -1.58
LINC01965-204ENST00000545549 RIMS2Q9UQ26 1411 aa5.16□□□□□ -1.58
LINC01965-204ENST00000545549 ZNF316A6NFI3 1004 aaPredicted RBP5.16□□□□□ -1.58
LINC01965-204ENST00000545549 TRIM37O94972 964 aa5.16□□□□□ -1.58
LINC01965-204ENST00000545549 ARHGEF1Q92888 912 aaKnown RBP5.16□□□□□ -1.58
LINC01965-204ENST00000545549 MPHOSPH9Q99550 1183 aa5.16□□□□□ -1.58
LINC01965-204ENST00000545549 ARIH1Q9Y4X5 557 aaPredicted RBP5.16□□□□□ -1.58
LINC01965-204ENST00000545549 MARF1Q9Y4F3 1742 aaKnown RBP5.16□□□□□ -1.58
LINC01965-204ENST00000545549 CLSPNQ9HAW4 1339 aa5.16□□□□□ -1.58
LINC01965-204ENST00000545549 TNRC18O15417 2968 aaPredicted RBP5.16□□□□□ -1.58
LINC01965-204ENST00000545549 DHX57Q6P158 1386 aaKnown RBP5.16□□□□□ -1.58
LINC01965-204ENST00000545549 PTPRUQ92729 1446 aa5.15□□□□□ -1.58
LINC01965-204ENST00000545549 FOXN1O15353 648 aa5.15□□□□□ -1.59
LINC01965-204ENST00000545549 ITGAEP38570 1179 aa5.15□□□□□ -1.59
LINC01965-204ENST00000545549 FSTL1Q12841 308 aa5.15□□□□□ -1.59
LINC01965-204ENST00000545549 FAM182BQ5T319 152 aa5.15□□□□□ -1.59
LINC01965-204ENST00000545549 RBM46Q8TBY0 533 aaKnown RBP5.15□□□□□ -1.59
LINC01965-204ENST00000545549 PDGFDQ9GZP0 370 aaPredicted RBP5.15□□□□□ -1.59
LINC01965-204ENST00000545549 MTFR1LQ9H019 292 aa5.15□□□□□ -1.59
LINC01965-204ENST00000545549 LHX6Q9UPM6 363 aa5.15□□□□□ -1.59
LINC01965-204ENST00000545549 CHD2O14647 1828 aaKnown RBP5.15□□□□□ -1.59
LINC01965-204ENST00000545549 POTEB3A0JP26 581 aa5.14□□□□□ -1.59
LINC01965-204ENST00000545549 SEMA3EO15041 775 aa5.14□□□□□ -1.59
LINC01965-204ENST00000545549 CTCFP49711 727 aaPredicted RBP5.14□□□□□ -1.59
LINC01965-204ENST00000545549 EMP3P54852 163 aa5.14□□□□□ -1.59
LINC01965-204ENST00000545549 PDIA6Q15084 440 aa5.14□□□□□ -1.59
LINC01965-204ENST00000545549 POTEBQ6S5H4 581 aa5.14□□□□□ -1.59
LINC01965-204ENST00000545549 DDX12PQ92771 950 aa5.14□□□□□ -1.59
LINC01965-204ENST00000545549 CCDC9Q9Y3X0 531 aaKnown RBP5.14□□□□□ -1.59
LINC01965-204ENST00000545549 SOS2Q07890 1332 aaPredicted RBP5.14□□□□□ -1.59
LINC01965-204ENST00000545549 RPGRIP1LQ68CZ1 1315 aa5.14□□□□□ -1.59
LINC01965-204ENST00000545549 PDE4DIPQ5VU43 2346 aa5.14□□□□□ -1.59
LINC01965-204ENST00000545549 XRN1Q8IZH2 1706 aaKnown RBP5.14□□□□□ -1.59
LINC01965-204ENST00000545549 TECPR2O15040 1411 aa5.14□□□□□ -1.59
LINC01965-204ENST00000545549 LAMC1P11047 1609 aa5.13□□□□□ -1.59
LINC01965-204ENST00000545549 USP32Q8NFA0 1604 aa5.13□□□□□ -1.59
LINC01965-204ENST00000545549 FAM205CA6NFA0 338 aa5.13□□□□□ -1.59
LINC01965-204ENST00000545549 YBX3P16989 372 aaKnown RBP eCLIP5.13□□□□□ -1.59
LINC01965-204ENST00000545549 MLLT3P42568 568 aaPredicted RBP5.13□□□□□ -1.59
LINC01965-204ENST00000545549 FAM196AQ6ZSG2 479 aa5.13□□□□□ -1.59
LINC01965-204ENST00000545549 SLC17A8Q8NDX2 589 aa5.13□□□□□ -1.59
LINC01965-204ENST00000545549 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.13□□□□□ -1.59
LINC01965-204ENST00000545549 ANO8Q9HCE9 1232 aaPredicted RBP5.13□□□□□ -1.59
LINC01965-204ENST00000545549 IFT172Q9UG01 1749 aa5.13□□□□□ -1.59
LINC01965-204ENST00000545549 PPLO60437 1756 aa5.12□□□□□ -1.59
LINC01965-204ENST00000545549 GRXCR2A6NFK2 248 aa5.12□□□□□ -1.59
LINC01965-204ENST00000545549 SPDYE16A6NNV3 312 aaPredicted RBP5.12□□□□□ -1.59
LINC01965-204ENST00000545549 FAM98CQ17RN3 349 aaKnown RBP5.12□□□□□ -1.59
LINC01965-204ENST00000545549 VARS2Q5ST30 1063 aaKnown RBP5.12□□□□□ -1.59
LINC01965-204ENST00000545549 ERBB3P21860 1342 aa5.12□□□□□ -1.59
LINC01965-204ENST00000545549 METP08581 1390 aa5.12□□□□□ -1.59
LINC01965-204ENST00000545549 TULP4Q9NRJ4 1543 aa5.12□□□□□ -1.59
LINC01965-204ENST00000545549 HABP4Q5JVS0 413 aaKnown RBP5.11□□□□□ -1.59
LINC01965-204ENST00000545549 ZNF454Q8N9F8 522 aa5.11□□□□□ -1.59
LINC01965-204ENST00000545549 PIK3C2GO75747 1445 aa5.11□□□□□ -1.59
LINC01965-204ENST00000545549 CACNA1AO00555 2505 aa5.11□□□□□ -1.59
LINC01965-204ENST00000545549 ADGRB1O14514 1584 aa5.1□□□□□ -1.59
LINC01965-204ENST00000545549 KIF1BO60333 1816 aa5.1□□□□□ -1.59
LINC01965-204ENST00000545549 PRIM1P49642 420 aaKnown RBP5.1□□□□□ -1.59
LINC01965-204ENST00000545549 FOSBP53539 338 aa5.1□□□□□ -1.59
LINC01965-204ENST00000545549 NBR1Q14596 966 aa5.1□□□□□ -1.59
LINC01965-204ENST00000545549 POTEGQ6S5H5 508 aa5.1□□□□□ -1.59
LINC01965-204ENST00000545549 C16orf71Q8IYS4 520 aaPredicted RBP5.1□□□□□ -1.59
LINC01965-204ENST00000545549 ADGRF5Q8IZF2 1346 aa5.1□□□□□ -1.59
LINC01965-204ENST00000545549 ARHGEF28Q8N1W1 1705 aaKnown RBP5.1□□□□□ -1.59
LINC01965-204ENST00000545549 AIDAQ96BJ3 306 aa5.1□□□□□ -1.59
LINC01965-204ENST00000545549 ABCC11Q96J66 1382 aa5.1□□□□□ -1.59
LINC01965-204ENST00000545549 HS3ST6Q96QI5 342 aa5.1□□□□□ -1.59
LINC01965-204ENST00000545549 PCDHGA10Q9Y5H3 936 aa5.1□□□□□ -1.59
LINC01965-204ENST00000545549 GOLGB1Q14789 3259 aaKnown RBP5.1□□□□□ -1.59
LINC01965-204ENST00000545549 CUL9Q8IWT3 2517 aa5.09□□□□□ -1.59
LINC01965-204ENST00000545549 CCDC144AA2RUR9 1427 aa5.09□□□□□ -1.59
LINC01965-204ENST00000545549 TESPA1A2RU30 521 aaPredicted RBP5.09□□□□□ -1.59
LINC01965-204ENST00000545549 POTEMA6NI47 508 aa5.09□□□□□ -1.59
LINC01965-204ENST00000545549 HDGFP51858 240 aaKnown RBP5.09□□□□□ -1.59
LINC01965-204ENST00000545549 SIRT1Q96EB6 747 aa5.09□□□□□ -1.59
LINC01965-204ENST00000545549 BCANQ96GW7 911 aa5.09□□□□□ -1.59
LINC01965-204ENST00000545549 STAC3Q96MF2 364 aa5.09□□□□□ -1.59
LINC01965-204ENST00000545549 C14orf93Q9H972 538 aaKnown RBP5.09□□□□□ -1.59
LINC01965-204ENST00000545549 LRPPRCP42704 1394 aaKnown RBP5.08□□□□□ -1.6
LINC01965-204ENST00000545549 ROBO2Q9HCK4 1378 aa5.08□□□□□ -1.6
LINC01965-204ENST00000545549 LBX1P52954 281 aa5.08□□□□□ -1.6
LINC01965-204ENST00000545549 NLGN2Q8NFZ4 835 aa5.08□□□□□ -1.6
LINC01965-204ENST00000545549 NWD2Q9ULI1 1742 aa5.07□□□□□ -1.6
LINC01965-204ENST00000545549 PHF14O94880 888 aa5.07□□□□□ -1.6
LINC01965-204ENST00000545549 OSBPP22059 807 aa5.07□□□□□ -1.6
LINC01965-204ENST00000545549 PPP4R3BQ5MIZ7 849 aa5.07□□□□□ -1.6
LINC01965-204ENST00000545549 TYW1BQ6NUM6 668 aa5.07□□□□□ -1.6
LINC01965-204ENST00000545549 ZDHHC16Q969W1 377 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms