RNA–Protein interactions for RNA: ENST00000545419.5

RNF10-223, Transcript of ring finger protein 10, human

TSL 5

Gene RNF10, Length 1,336 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF10-223	ENST00000545419	FYB1	O15117	783 aa		10.93	□□□□□ -0.66
RNF10-223	ENST00000545419	PDE4A	P27815	886 aa		10.93	□□□□□ -0.66
RNF10-223	ENST00000545419	CARD14	Q9BXL6	1004 aa		10.93	□□□□□ -0.66
RNF10-223	ENST00000545419	AATK	Q6ZMQ8	1374 aa		10.93	□□□□□ -0.66
RNF10-223	ENST00000545419	SPATA31A5	Q5VU36	1347 aa		10.93	□□□□□ -0.66
RNF10-223	ENST00000545419	SPATA31A7	Q8IWB4	1347 aa		10.93	□□□□□ -0.66
RNF10-223	ENST00000545419	EDC4	Q6P2E9	1401 aa	Known RBP	10.93	□□□□□ -0.66
RNF10-223	ENST00000545419	C7	P10643	843 aa		10.92	□□□□□ -0.66
RNF10-223	ENST00000545419	NME9	Q86XW9	330 aa		10.92	□□□□□ -0.66
RNF10-223	ENST00000545419	PDCD7	Q8N8D1	485 aa	Known RBP	10.92	□□□□□ -0.66
RNF10-223	ENST00000545419	AXIN2	Q9Y2T1	843 aa		10.92	□□□□□ -0.66
RNF10-223	ENST00000545419		A0A1W2PP64	1363 aa		10.92	□□□□□ -0.66
RNF10-223	ENST00000545419	ANKRD36B	Q8N2N9	1353 aa		10.91	□□□□□ -0.66
RNF10-223	ENST00000545419	C11orf95	C9JLR9	678 aa	Predicted RBP	10.91	□□□□□ -0.66
RNF10-223	ENST00000545419	DPY19L2	Q6NUT2	758 aa		10.91	□□□□□ -0.66
RNF10-223	ENST00000545419	SEPT12	Q8IYM1	358 aa		10.91	□□□□□ -0.66
RNF10-223	ENST00000545419	UPF1	Q92900	1129 aa	Known RBP eCLIP	10.91	□□□□□ -0.66	6e-7	■□□□□ 9.7
RNF10-223	ENST00000545419	CCDC9	Q9Y3X0	531 aa	Known RBP	10.91	□□□□□ -0.66
RNF10-223	ENST00000545419	NWD2	Q9ULI1	1742 aa		10.9	□□□□□ -0.66
RNF10-223	ENST00000545419	PELP1	Q8IZL8	1130 aa	Known RBP	10.9	□□□□□ -0.66
RNF10-223	ENST00000545419	L3MBTL3	Q96JM7	780 aa	Predicted RBP	10.9	□□□□□ -0.66
RNF10-223	ENST00000545419	THRAP3	Q9Y2W1	955 aa	Known RBP	10.9	□□□□□ -0.66
RNF10-223	ENST00000545419	AKAP12	Q02952	1782 aa		10.9	□□□□□ -0.66
RNF10-223	ENST00000545419	COL14A1	Q05707	1796 aa	Known RBP	10.9	□□□□□ -0.66
RNF10-223	ENST00000545419	SPATA31A1	Q5TZJ5	1347 aa		10.9	□□□□□ -0.66
RNF10-223	ENST00000545419	CRYBG1	Q9Y4K1	1723 aa		10.9	□□□□□ -0.67
RNF10-223	ENST00000545419	LARP1	Q6PKG0	1096 aa	Known RBP	10.89	□□□□□ -0.67
RNF10-223	ENST00000545419	BARGIN	Q6ZT62	677 aa		10.89	□□□□□ -0.67
RNF10-223	ENST00000545419	CCDC125	Q86Z20	511 aa		10.89	□□□□□ -0.67
RNF10-223	ENST00000545419	COG3	Q96JB2	828 aa		10.89	□□□□□ -0.67
RNF10-223	ENST00000545419	STRN4	Q9NRL3	753 aa		10.89	□□□□□ -0.67
RNF10-223	ENST00000545419	SLIT3	O75094	1523 aa		10.89	□□□□□ -0.67
RNF10-223	ENST00000545419	CAMTA1	Q9Y6Y1	1673 aa		10.88	□□□□□ -0.67
RNF10-223	ENST00000545419	NBR1	Q14596	966 aa		10.88	□□□□□ -0.67
RNF10-223	ENST00000545419	FAM98C	Q17RN3	349 aa	Known RBP	10.88	□□□□□ -0.67
RNF10-223	ENST00000545419	BOLA1	Q9Y3E2	137 aa		10.88	□□□□□ -0.67
RNF10-223	ENST00000545419	ABCA3	Q99758	1704 aa		10.88	□□□□□ -0.67
RNF10-223	ENST00000545419	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	10.88	□□□□□ -0.67
RNF10-223	ENST00000545419	RGS12	O14924	1447 aa		10.87	□□□□□ -0.67
RNF10-223	ENST00000545419	TCP11L2	Q8N4U5	519 aa		10.87	□□□□□ -0.67
RNF10-223	ENST00000545419	IP6K1	Q92551	441 aa		10.87	□□□□□ -0.67
RNF10-223	ENST00000545419	LARP6	Q9BRS8	491 aa	Known RBP	10.87	□□□□□ -0.67
RNF10-223	ENST00000545419	KRT27	Q7Z3Y8	459 aa		10.86	□□□□□ -0.67
RNF10-223	ENST00000545419	MICALL2	Q8IY33	904 aa		10.86	□□□□□ -0.67
RNF10-223	ENST00000545419	CARD10	Q9BWT7	1032 aa		10.86	□□□□□ -0.67
RNF10-223	ENST00000545419	PANK3	Q9H999	370 aa		10.86	□□□□□ -0.67
RNF10-223	ENST00000545419	METRN	Q9UJH8	293 aa		10.86	□□□□□ -0.67
RNF10-223	ENST00000545419	PIK3C2A	O00443	1686 aa		10.86	□□□□□ -0.67
RNF10-223	ENST00000545419	MON2	Q7Z3U7	1717 aa		10.86	□□□□□ -0.67
RNF10-223	ENST00000545419	GGNBP2	Q9H3C7	697 aa		10.85	□□□□□ -0.67
RNF10-223	ENST00000545419	WDR17	Q8IZU2	1322 aa		10.85	□□□□□ -0.67
RNF10-223	ENST00000545419	GLI3	P10071	1580 aa		10.85	□□□□□ -0.67
RNF10-223	ENST00000545419	PHRF1	Q9P1Y6	1649 aa	Known RBP	10.85	□□□□□ -0.67
RNF10-223	ENST00000545419	ZBTB7C	A1YPR0	619 aa		10.84	□□□□□ -0.67
RNF10-223	ENST00000545419	FBLN1	P23142	703 aa		10.84	□□□□□ -0.67
RNF10-223	ENST00000545419	USP35	Q9P2H5	1018 aa		10.84	□□□□□ -0.67
RNF10-223	ENST00000545419	PLCH1	Q4KWH8	1693 aa		10.84	□□□□□ -0.67
RNF10-223	ENST00000545419	NRK	Q7Z2Y5	1582 aa		10.84	□□□□□ -0.67
RNF10-223	ENST00000545419	POTEI	P0CG38	1075 aa		10.84	□□□□□ -0.67
RNF10-223	ENST00000545419	TOM1L2	Q6ZVM7	507 aa		10.84	□□□□□ -0.67
RNF10-223	ENST00000545419	POLR3GL	Q9BT43	218 aa		10.84	□□□□□ -0.67
RNF10-223	ENST00000545419	CDCA7	Q9BWT1	371 aa	Predicted RBP	10.84	□□□□□ -0.67
RNF10-223	ENST00000545419	CRISPLD2	Q9H0B8	497 aa		10.84	□□□□□ -0.67
RNF10-223	ENST00000545419	COLQ	Q9Y215	455 aa	Predicted RBP	10.84	□□□□□ -0.67
RNF10-223	ENST00000545419	COL18A1	P39060	1754 aa		10.83	□□□□□ -0.68
RNF10-223	ENST00000545419	OVOS2	A0A0J9YW53	1432 aa		10.83	□□□□□ -0.68
RNF10-223	ENST00000545419	CRB1	P82279	1406 aa		10.83	□□□□□ -0.68
RNF10-223	ENST00000545419	OVOS2	Q6IE36	1432 aa		10.83	□□□□□ -0.68
RNF10-223	ENST00000545419	COL5A2	P05997	1499 aa	Predicted RBP	10.83	□□□□□ -0.68
RNF10-223	ENST00000545419	NFAT5	O94916	1531 aa		10.83	□□□□□ -0.68
RNF10-223	ENST00000545419	LMO7	Q8WWI1	1683 aa		10.83	□□□□□ -0.68
RNF10-223	ENST00000545419	PER1	O15534	1290 aa	Predicted RBP	10.83	□□□□□ -0.68
RNF10-223	ENST00000545419	TMC2	Q8TDI7	906 aa		10.83	□□□□□ -0.68
RNF10-223	ENST00000545419	DDX27	Q96GQ7	796 aa	Known RBP	10.83	□□□□□ -0.68
RNF10-223	ENST00000545419	CGNL1	Q0VF96	1302 aa		10.82	□□□□□ -0.68
RNF10-223	ENST00000545419	MAP3K19	Q56UN5	1328 aa		10.82	□□□□□ -0.68
RNF10-223	ENST00000545419	NRAP	Q86VF7	1730 aa		10.82	□□□□□ -0.68
RNF10-223	ENST00000545419	AMPH	P49418	695 aa		10.82	□□□□□ -0.68
RNF10-223	ENST00000545419	PDE3B	Q13370	1112 aa		10.82	□□□□□ -0.68
RNF10-223	ENST00000545419	E2F4	Q16254	413 aa		10.82	□□□□□ -0.68
RNF10-223	ENST00000545419	FAM196A	Q6ZSG2	479 aa		10.82	□□□□□ -0.68
RNF10-223	ENST00000545419	ANKRD24	Q8TF21	1146 aa		10.82	□□□□□ -0.68
RNF10-223	ENST00000545419	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	10.82	□□□□□ -0.68
RNF10-223	ENST00000545419	KIF7	Q2M1P5	1343 aa		10.82	□□□□□ -0.68
RNF10-223	ENST00000545419	USP54	Q70EL1	1684 aa		10.81	□□□□□ -0.68
RNF10-223	ENST00000545419	CSB-PGBD3	P0DP91	1061 aa		10.81	□□□□□ -0.68
RNF10-223	ENST00000545419	HOXC9	P31274	260 aa		10.81	□□□□□ -0.68
RNF10-223	ENST00000545419	GPHN	Q9NQX3	736 aa	Predicted RBP	10.81	□□□□□ -0.68
RNF10-223	ENST00000545419	ERBB3	P21860	1342 aa		10.81	□□□□□ -0.68
RNF10-223	ENST00000545419	SRCAP	Q6ZRS2	3230 aa		10.8	□□□□□ -0.68
RNF10-223	ENST00000545419		A0A0G2JS52	829 aa		10.8	□□□□□ -0.68
RNF10-223	ENST00000545419	EXOC5	O00471	708 aa		10.8	□□□□□ -0.68
RNF10-223	ENST00000545419	MYT1	Q01538	1121 aa		10.8	□□□□□ -0.68
RNF10-223	ENST00000545419	MFSD10	Q14728	455 aa		10.8	□□□□□ -0.68
RNF10-223	ENST00000545419	NSD3	Q9BZ95	1437 aa		10.8	□□□□□ -0.68
RNF10-223	ENST00000545419	NLRP2	Q9NX02	1062 aa		10.8	□□□□□ -0.68
RNF10-223	ENST00000545419	KNSTRN	Q9Y448	316 aa		10.8	□□□□□ -0.68
RNF10-223	ENST00000545419	ABCC6	O95255	1503 aa		10.79	□□□□□ -0.68
RNF10-223	ENST00000545419	BLM	P54132	1417 aa	Predicted RBP	10.79	□□□□□ -0.68
RNF10-223	ENST00000545419	KIF24	Q5T7B8	1368 aa		10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 18 ms