RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 OVOS2A0A0G2JMS6 1433 aa17.25■□□□□ 0.35
CDCA3-210ENST00000545368 A0A0G2JS52 829 aa17.25■□□□□ 0.35
CDCA3-210ENST00000545368 MYT1Q01538 1121 aa17.25■□□□□ 0.35
CDCA3-210ENST00000545368 FAM98CQ17RN3 349 aaKnown RBP17.25■□□□□ 0.35
CDCA3-210ENST00000545368 THSD7AQ9UPZ6 1657 aa17.25■□□□□ 0.35
CDCA3-210ENST00000545368 LRRC37A3O60309 1634 aa17.25■□□□□ 0.35
CDCA3-210ENST00000545368 PKD1L3Q7Z443 1732 aa17.24■□□□□ 0.35
CDCA3-210ENST00000545368 MAPK8IP3Q9UPT6 1336 aa17.24■□□□□ 0.35
CDCA3-210ENST00000545368 RXRBP28702 533 aa17.24■□□□□ 0.35
CDCA3-210ENST00000545368 AMOTQ4VCS5 1084 aa17.22■□□□□ 0.35
CDCA3-210ENST00000545368 PLEKHO1Q53GL0 409 aaPredicted RBP17.22■□□□□ 0.35
CDCA3-210ENST00000545368 RUNDC1Q96C34 613 aa17.22■□□□□ 0.35
CDCA3-210ENST00000545368 SPG7Q9UQ90 795 aa17.22■□□□□ 0.35
CDCA3-210ENST00000545368 TNS2Q63HR2 1409 aa17.21■□□□□ 0.35
CDCA3-210ENST00000545368 POTEAQ6S8J7 498 aa17.21■□□□□ 0.35
CDCA3-210ENST00000545368 CCDC146Q8IYE0 955 aa17.21■□□□□ 0.35
CDCA3-210ENST00000545368 PLEKHF1Q96S99 279 aa17.21■□□□□ 0.35
CDCA3-210ENST00000545368 EXOC5O00471 708 aa17.2■□□□□ 0.34
CDCA3-210ENST00000545368 DDB1Q16531 1140 aa17.2■□□□□ 0.34
CDCA3-210ENST00000545368 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.2■□□□□ 0.34
CDCA3-210ENST00000545368 SHANK3Q9BYB0 1731 aa17.19■□□□□ 0.34
CDCA3-210ENST00000545368 ONECUT3O60422 494 aaPredicted RBP17.19■□□□□ 0.34
CDCA3-210ENST00000545368 GAS2L2Q8NHY3 880 aa17.19■□□□□ 0.34
CDCA3-210ENST00000545368 ZCRB1Q8TBF4 217 aaKnown RBP17.19■□□□□ 0.34
CDCA3-210ENST00000545368 PCDH11XQ9BZA7 1347 aa17.19■□□□□ 0.34
CDCA3-210ENST00000545368 PCDH11YQ9BZA8 1340 aa17.19■□□□□ 0.34
CDCA3-210ENST00000545368 SEPT12Q8IYM1 358 aa17.18■□□□□ 0.34
CDCA3-210ENST00000545368 C1orf141Q5JVX7 400 aa17.17■□□□□ 0.34
CDCA3-210ENST00000545368 ZNF530Q6P9A1 599 aaPredicted RBP17.17■□□□□ 0.34
CDCA3-210ENST00000545368 PHACTR3Q96KR7 559 aa17.17■□□□□ 0.34
CDCA3-210ENST00000545368 RGS12O14924 1447 aa17.16■□□□□ 0.34
CDCA3-210ENST00000545368 PDE3BQ13370 1112 aa17.16■□□□□ 0.34
CDCA3-210ENST00000545368 MTHFSDQ2M296 383 aaKnown RBP17.16■□□□□ 0.34
CDCA3-210ENST00000545368 BRWD3Q6RI45 1802 aa17.15■□□□□ 0.34
CDCA3-210ENST00000545368 DLG5Q8TDM6 1919 aa17.14■□□□□ 0.33
CDCA3-210ENST00000545368 NFE2L2Q16236 605 aa17.14■□□□□ 0.33
CDCA3-210ENST00000545368 IFNL2Q8IZJ0 200 aa17.14■□□□□ 0.33
CDCA3-210ENST00000545368 DDX54Q8TDD1 881 aaKnown RBP17.14■□□□□ 0.33
CDCA3-210ENST00000545368 MAP3K5Q99683 1374 aa17.14■□□□□ 0.33
CDCA3-210ENST00000545368 APAF1O14727 1248 aa17.13■□□□□ 0.33
CDCA3-210ENST00000545368 HSP90AB1P08238 724 aaKnown RBP17.13■□□□□ 0.33
CDCA3-210ENST00000545368 AKAP4Q5JQC9 854 aa17.13■□□□□ 0.33
CDCA3-210ENST00000545368 PHKG2P15735 406 aa17.12■□□□□ 0.33
CDCA3-210ENST00000545368 TMPOP42166 694 aaKnown RBP17.12■□□□□ 0.33
CDCA3-210ENST00000545368 LMOD3Q0VAK6 560 aa17.12■□□□□ 0.33
CDCA3-210ENST00000545368 GNAT3A8MTJ3 354 aa17.11■□□□□ 0.33
CDCA3-210ENST00000545368 CYP27B1O15528 508 aa17.11■□□□□ 0.33
CDCA3-210ENST00000545368 RIPK4P57078 832 aa17.11■□□□□ 0.33
CDCA3-210ENST00000545368 NEUROD2Q15784 382 aa17.11■□□□□ 0.33
CDCA3-210ENST00000545368 KRT27Q7Z3Y8 459 aa17.11■□□□□ 0.33
CDCA3-210ENST00000545368 RTF1Q92541 710 aaKnown RBP17.11■□□□□ 0.33
CDCA3-210ENST00000545368 VIRMAQ69YN4 1812 aaKnown RBP17.11■□□□□ 0.33
CDCA3-210ENST00000545368 RRP7AQ9Y3A4 280 aaKnown RBP17.1■□□□□ 0.33
CDCA3-210ENST00000545368 MARCH10Q8NA82 808 aaPredicted RBP17.09■□□□□ 0.33
CDCA3-210ENST00000545368 SCN11AQ9UI33 1791 aa17.09■□□□□ 0.33
CDCA3-210ENST00000545368 DOT1LQ8TEK3 1739 aa17.08■□□□□ 0.32
CDCA3-210ENST00000545368 HTATSF1O43719 755 aaKnown RBP17.08■□□□□ 0.32
CDCA3-210ENST00000545368 NGEFQ8N5V2 710 aa17.08■□□□□ 0.32
CDCA3-210ENST00000545368 DCAF5Q96JK2 942 aa17.08■□□□□ 0.32
CDCA3-210ENST00000545368 ADAMTS7Q9UKP4 1686 aa17.07■□□□□ 0.32
CDCA3-210ENST00000545368 NKX1-1Q15270 411 aaPredicted RBP17.07■□□□□ 0.32
CDCA3-210ENST00000545368 NCBP3Q53F19 620 aaKnown RBP17.07■□□□□ 0.32
CDCA3-210ENST00000545368 KDM6AO15550 1401 aaPredicted RBP17.06■□□□□ 0.32
CDCA3-210ENST00000545368 SENP3-EIF4A1A0A087X0R7 540 aa17.06■□□□□ 0.32
CDCA3-210ENST00000545368 MPRIPQ6WCQ1 1025 aa17.06■□□□□ 0.32
CDCA3-210ENST00000545368 TOGARAM1Q9Y4F4 1720 aa17.06■□□□□ 0.32
CDCA3-210ENST00000545368 BCL9O00512 1426 aa17.05■□□□□ 0.32
CDCA3-210ENST00000545368 RNMTO43148 476 aaKnown RBP17.05■□□□□ 0.32
CDCA3-210ENST00000545368 HNRNPUQ00839 825 aaKnown RBP eCLIP17.05■□□□□ 0.32
CDCA3-210ENST00000545368 CCDC27Q2M243 656 aa17.05■□□□□ 0.32
CDCA3-210ENST00000545368 SALL2Q9Y467 1007 aaPredicted RBP17.05■□□□□ 0.32
CDCA3-210ENST00000545368 FAM196AQ6ZSG2 479 aa17.04■□□□□ 0.32
CDCA3-210ENST00000545368 MCM10Q7L590 875 aa17.04■□□□□ 0.32
CDCA3-210ENST00000545368 KAT6BQ8WYB5 2073 aa17.03■□□□□ 0.32
CDCA3-210ENST00000545368 CALD1Q05682 793 aaKnown RBP17.03■□□□□ 0.32
CDCA3-210ENST00000545368 TEFQ10587 303 aa17.03■□□□□ 0.32
CDCA3-210ENST00000545368 FAM182BQ5T319 152 aa17.03■□□□□ 0.32
CDCA3-210ENST00000545368 TRIM35Q9UPQ4 493 aa17.03■□□□□ 0.32
CDCA3-210ENST00000545368 MRC1P22897 1456 aa17.03■□□□□ 0.32
CDCA3-210ENST00000545368 NHSQ6T4R5 1651 aa17.03■□□□□ 0.32
CDCA3-210ENST00000545368 ITGB4P16144 1822 aa17.03■□□□□ 0.32
CDCA3-210ENST00000545368 CEMIPQ8WUJ3 1361 aa17.02■□□□□ 0.32
CDCA3-210ENST00000545368 ERVV-2B6SEH9 535 aa17.02■□□□□ 0.32
CDCA3-210ENST00000545368 DCTN1Q14203 1278 aa17.02■□□□□ 0.32
CDCA3-210ENST00000545368 IL17REQ8NFR9 667 aa17.02■□□□□ 0.32
CDCA3-210ENST00000545368 LGR6Q9HBX8 967 aa17.02■□□□□ 0.32
CDCA3-210ENST00000545368 SBF2Q86WG5 1849 aa17.02■□□□□ 0.31
CDCA3-210ENST00000545368 CABP4P57796 275 aa17.01■□□□□ 0.31
CDCA3-210ENST00000545368 WWC1Q8IX03 1113 aa17.01■□□□□ 0.31
CDCA3-210ENST00000545368 SYTL4Q96C24 671 aaPredicted RBP17.01■□□□□ 0.31
CDCA3-210ENST00000545368 ACSBG1Q96GR2 724 aa17.01■□□□□ 0.31
CDCA3-210ENST00000545368 SIPA1L3O60292 1781 aaPredicted RBP17■□□□□ 0.31
CDCA3-210ENST00000545368 THUMPD2Q9BTF0 503 aaKnown RBP17■□□□□ 0.31
CDCA3-210ENST00000545368 SLC52A2Q9HAB3 445 aa17■□□□□ 0.31
CDCA3-210ENST00000545368 TMOD3Q9NYL9 352 aa17■□□□□ 0.31
CDCA3-210ENST00000545368 YTHDC1Q96MU7 727 aaKnown RBP16.99■□□□□ 0.31
CDCA3-210ENST00000545368 PRIM1P49642 420 aaKnown RBP16.98■□□□□ 0.31
CDCA3-210ENST00000545368 ZBED9Q6R2W3 1325 aa16.97■□□□□ 0.31
CDCA3-210ENST00000545368 WDR63Q8IWG1 891 aa16.97■□□□□ 0.31
CDCA3-210ENST00000545368 BTAF1O14981 1849 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms