RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 NBPF6Q5VWK0 638 aa19.69■□□□□ 0.74
DDX11-228ENST00000545115 NBPF4Q96M43 638 aa19.69■□□□□ 0.74
DDX11-228ENST00000545115 SGIP1Q9BQI5 828 aa19.69■□□□□ 0.74
DDX11-228ENST00000545115 TIMELESSQ9UNS1 1208 aa19.69■□□□□ 0.74
DDX11-228ENST00000545115 CGNL1Q0VF96 1302 aa19.69■□□□□ 0.74
DDX11-228ENST00000545115 KIF20BQ96Q89 1820 aa19.69■□□□□ 0.74
DDX11-228ENST00000545115 PRIM1P49642 420 aaKnown RBP19.68■□□□□ 0.74
DDX11-228ENST00000545115 FLT4P35916 1363 aa19.68■□□□□ 0.74
DDX11-228ENST00000545115 KIF24Q5T7B8 1368 aa19.68■□□□□ 0.74
DDX11-228ENST00000545115 RAPGEF4Q8WZA2 1011 aa19.67■□□□□ 0.74
DDX11-228ENST00000545115 AKT1S1Q96B36 256 aa19.67■□□□□ 0.74
DDX11-228ENST00000545115 SYT17Q9BSW7 474 aa19.67■□□□□ 0.74
DDX11-228ENST00000545115 FHDC1Q9C0D6 1143 aaPredicted RBP19.67■□□□□ 0.74
DDX11-228ENST00000545115 NSD2O96028 1365 aa19.67■□□□□ 0.74
DDX11-228ENST00000545115 INSRP06213 1382 aa19.67■□□□□ 0.74
DDX11-228ENST00000545115 USHBP1Q8N6Y0 703 aa19.66■□□□□ 0.74
DDX11-228ENST00000545115 HSP90AB2PQ58FF8 381 aa19.65■□□□□ 0.74
DDX11-228ENST00000545115 NSD3Q9BZ95 1437 aa19.65■□□□□ 0.74
DDX11-228ENST00000545115 TATP17735 454 aaPredicted RBP19.64■□□□□ 0.73
DDX11-228ENST00000545115 ARXQ96QS3 562 aa19.64■□□□□ 0.73
DDX11-228ENST00000545115 CLSPNQ9HAW4 1339 aa19.64■□□□□ 0.73
DDX11-228ENST00000545115 QSER1Q2KHR3 1735 aa19.63■□□□□ 0.73
DDX11-228ENST00000545115 SLC16A10Q8TF71 515 aa19.63■□□□□ 0.73
DDX11-228ENST00000545115 CARD14Q9BXL6 1004 aa19.63■□□□□ 0.73
DDX11-228ENST00000545115 LY75O60449 1722 aa19.62■□□□□ 0.73
DDX11-228ENST00000545115 MAP3K5Q99683 1374 aa19.62■□□□□ 0.73
DDX11-228ENST00000545115 PNPLA7Q6ZV29 1317 aa19.62■□□□□ 0.73
DDX11-228ENST00000545115 PCDH11XQ9BZA7 1347 aa19.62■□□□□ 0.73
DDX11-228ENST00000545115 PCDH11YQ9BZA8 1340 aa19.62■□□□□ 0.73
DDX11-228ENST00000545115 KCNQ4P56696 695 aa19.62■□□□□ 0.73
DDX11-228ENST00000545115 TFCP2L1Q9NZI6 479 aa19.62■□□□□ 0.73
DDX11-228ENST00000545115 CCNL1Q9UK58 526 aaPredicted RBP19.61■□□□□ 0.73
DDX11-228ENST00000545115 EMILIN1Q9Y6C2 1016 aa19.6■□□□□ 0.73
DDX11-228ENST00000545115 POLD1P28340 1107 aa19.58■□□□□ 0.72
DDX11-228ENST00000545115 TUBGCP6Q96RT7 1819 aa19.58■□□□□ 0.72
DDX11-228ENST00000545115 ANKRD26Q9UPS8 1709 aa19.56■□□□□ 0.72
DDX11-228ENST00000545115 PCGF6Q9BYE7 350 aa19.56■□□□□ 0.72
DDX11-228ENST00000545115 NCAPD2Q15021 1401 aa19.56■□□□□ 0.72
DDX11-228ENST00000545115 PPM1GO15355 546 aaPredicted RBP19.55■□□□□ 0.72
DDX11-228ENST00000545115 CYP27B1O15528 508 aa19.55■□□□□ 0.72
DDX11-228ENST00000545115 COL24A1Q17RW2 1714 aa19.55■□□□□ 0.72
DDX11-228ENST00000545115 PKD1L3Q7Z443 1732 aa19.54■□□□□ 0.72
DDX11-228ENST00000545115 PALLDQ8WX93 1383 aa19.54■□□□□ 0.72
DDX11-228ENST00000545115 WASHC2AQ641Q2 1341 aa19.53■□□□□ 0.72
DDX11-228ENST00000545115 HMGB2P26583 209 aaKnown RBP19.53■□□□□ 0.72
DDX11-228ENST00000545115 UTRNP46939 3433 aa19.53■□□□□ 0.72
DDX11-228ENST00000545115 MPRIPQ6WCQ1 1025 aa19.52■□□□□ 0.72
DDX11-228ENST00000545115 KLHL34Q8N239 644 aa19.52■□□□□ 0.72
DDX11-228ENST00000545115 POLR3GLQ9BT43 218 aa19.52■□□□□ 0.72
DDX11-228ENST00000545115 C5P01031 1676 aa19.51■□□□□ 0.71
DDX11-228ENST00000545115 TOGARAM1Q9Y4F4 1720 aa19.51■□□□□ 0.71
DDX11-228ENST00000545115 MSH5O43196 834 aa19.5■□□□□ 0.71
DDX11-228ENST00000545115 COL23A1Q86Y22 540 aaPredicted RBP19.5■□□□□ 0.71
DDX11-228ENST00000545115 SPG7Q9UQ90 795 aa19.5■□□□□ 0.71
DDX11-228ENST00000545115 GPR162Q16538 588 aa19.49■□□□□ 0.71
DDX11-228ENST00000545115 SMARCC1Q92922 1105 aaPredicted RBP19.49■□□□□ 0.71
DDX11-228ENST00000545115 EYA1Q99502 592 aa19.49■□□□□ 0.71
DDX11-228ENST00000545115 POLKQ9UBT6 870 aa19.49■□□□□ 0.71
DDX11-228ENST00000545115 MAP2P11137 1827 aaKnown RBP19.48■□□□□ 0.71
DDX11-228ENST00000545115 EIF4G2P78344 907 aaKnown RBP eCLIP19.48■□□□□ 0.71
DDX11-228ENST00000545115 NKX1-1Q15270 411 aaPredicted RBP19.48■□□□□ 0.71
DDX11-228ENST00000545115 ZNF784Q8NCA9 323 aaPredicted RBP19.48■□□□□ 0.71
DDX11-228ENST00000545115 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.48■□□□□ 0.71
DDX11-228ENST00000545115 CHD4Q14839 1912 aa19.47■□□□□ 0.71
DDX11-228ENST00000545115 ITGB4P16144 1822 aa19.46■□□□□ 0.71
DDX11-228ENST00000545115 FLAD1Q8NFF5 587 aa19.46■□□□□ 0.71
DDX11-228ENST00000545115 TAF1LQ8IZX4 1826 aa19.46■□□□□ 0.71
DDX11-228ENST00000545115 HSPA5P11021 654 aaKnown RBP19.45■□□□□ 0.7
DDX11-228ENST00000545115 TNNT2P45379 298 aaPredicted RBP19.45■□□□□ 0.7
DDX11-228ENST00000545115 NLGN2Q8NFZ4 835 aa19.45■□□□□ 0.7
DDX11-228ENST00000545115 PIGBQ92521 554 aa19.45■□□□□ 0.7
DDX11-228ENST00000545115 C4BP0C0L5 1744 aa19.45■□□□□ 0.7
DDX11-228ENST00000545115 PLEKHG2Q9H7P9 1386 aa19.44■□□□□ 0.7
DDX11-228ENST00000545115 EIF4A2Q14240 407 aaKnown RBP19.44■□□□□ 0.7
DDX11-228ENST00000545115 MSL1Q68DK7 614 aa19.44■□□□□ 0.7
DDX11-228ENST00000545115 IFNL2Q8IZJ0 200 aa19.43■□□□□ 0.7
DDX11-228ENST00000545115 PELP1Q8IZL8 1130 aaKnown RBP19.43■□□□□ 0.7
DDX11-228ENST00000545115 AK7Q96M32 723 aa19.43■□□□□ 0.7
DDX11-228ENST00000545115 PHKG2P15735 406 aa19.42■□□□□ 0.7
DDX11-228ENST00000545115 PANK3Q9H999 370 aa19.42■□□□□ 0.7
DDX11-228ENST00000545115 TMOD3Q9NYL9 352 aa19.42■□□□□ 0.7
DDX11-228ENST00000545115 LOC102724428A0A0B4J2F2 783 aa19.4■□□□□ 0.7
DDX11-228ENST00000545115 SIK1P57059 783 aa19.4■□□□□ 0.7
DDX11-228ENST00000545115 IGSF1Q8N6C5 1336 aa19.4■□□□□ 0.7
DDX11-228ENST00000545115 CCER1Q8TC90 406 aaPredicted RBP19.39■□□□□ 0.69
DDX11-228ENST00000545115 SSFA2P28290 1259 aa19.38■□□□□ 0.69
DDX11-228ENST00000545115 ASAP1Q9ULH1 1129 aa19.38■□□□□ 0.69
DDX11-228ENST00000545115 UBR3Q6ZT12 1888 aa19.37■□□□□ 0.69
DDX11-228ENST00000545115 PHF14O94880 888 aa19.37■□□□□ 0.69
DDX11-228ENST00000545115 AMIGO3Q86WK7 504 aa19.37■□□□□ 0.69
DDX11-228ENST00000545115 LINC00116Q8NCU8 138 aa19.37■□□□□ 0.69
DDX11-228ENST00000545115 CD2APQ9Y5K6 639 aa19.37■□□□□ 0.69
DDX11-228ENST00000545115 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.36■□□□□ 0.69
DDX11-228ENST00000545115 GRIN3BO60391 1043 aa19.36■□□□□ 0.69
DDX11-228ENST00000545115 YBX3P16989 372 aaKnown RBP eCLIP19.35■□□□□ 0.69
DDX11-228ENST00000545115 ATP6V1AP38606 617 aa19.35■□□□□ 0.69
DDX11-228ENST00000545115 MORC1Q86VD1 984 aa19.35■□□□□ 0.69
DDX11-228ENST00000545115 GOLGB1Q14789 3259 aaKnown RBP19.35■□□□□ 0.69
DDX11-228ENST00000545115 HSP90AB1P08238 724 aaKnown RBP19.34■□□□□ 0.69
DDX11-228ENST00000545115 ITPK1Q13572 414 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms