RNA–Protein interactions for RNA: ENST00000545061.5

SCN8A-203, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 11,433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-203ENST00000545061 PAFAH1B1P43034 410 aa10.54□□□□□ -0.72
SCN8A-203ENST00000545061 SRPK2P78362 688 aaKnown RBP10.54□□□□□ -0.72
SCN8A-203ENST00000545061 SART3Q15020 963 aaKnown RBP10.54□□□□□ -0.72
SCN8A-203ENST00000545061 EHBP1Q8NDI1 1231 aa10.54□□□□□ -0.72
SCN8A-203ENST00000545061 GOPCQ9HD26 462 aa10.54□□□□□ -0.72
SCN8A-203ENST00000545061 BRPF3Q9ULD4 1205 aa10.54□□□□□ -0.72
SCN8A-203ENST00000545061 USP6NLQ92738 828 aa10.53□□□□□ -0.72
SCN8A-203ENST00000545061 SCLT1Q96NL6 688 aa10.53□□□□□ -0.72
SCN8A-203ENST00000545061 SFPQP23246 707 aaKnown RBP eCLIP10.53□□□□□ -0.72
SCN8A-203ENST00000545061 P3H3Q8IVL6 736 aa10.53□□□□□ -0.72
SCN8A-203ENST00000545061 UIMC1Q96RL1 719 aa10.53□□□□□ -0.72
SCN8A-203ENST00000545061 PPP1R14CQ8TAE6 165 aa10.53□□□□□ -0.72
SCN8A-203ENST00000545061 PPFIA3O75145 1194 aa10.53□□□□□ -0.72
SCN8A-203ENST00000545061 CCDC155Q8N6L0 562 aa10.53□□□□□ -0.72
SCN8A-203ENST00000545061 MXRA7P84157 204 aa10.53□□□□□ -0.72
SCN8A-203ENST00000545061 CCDC65Q8IXS2 484 aa10.53□□□□□ -0.72
SCN8A-203ENST00000545061 CALCOCO2Q13137 446 aa10.53□□□□□ -0.72
SCN8A-203ENST00000545061 CLIP2Q9UDT6 1046 aa10.53□□□□□ -0.72
SCN8A-203ENST00000545061 PABPN1LA6NDY0 278 aaKnown RBP10.53□□□□□ -0.72
SCN8A-203ENST00000545061 PDE1CQ14123 709 aaPredicted RBP10.53□□□□□ -0.72
SCN8A-203ENST00000545061 FAM177A1Q8N128 213 aaPredicted RBP10.53□□□□□ -0.72
SCN8A-203ENST00000545061 WDR78Q5VTH9 848 aa10.52□□□□□ -0.72
SCN8A-203ENST00000545061 CKAP4Q07065 602 aaKnown RBP10.52□□□□□ -0.72
SCN8A-203ENST00000545061 CEP57L1Q8IYX8 460 aa10.52□□□□□ -0.72
SCN8A-203ENST00000545061 POTEDQ86YR6 584 aa10.52□□□□□ -0.72
SCN8A-203ENST00000545061 ALS2CR12Q96Q35 445 aa10.52□□□□□ -0.73
SCN8A-203ENST00000545061 NCAPGQ9BPX3 1015 aa10.52□□□□□ -0.73
SCN8A-203ENST00000545061 ARFGAP3Q9NP61 516 aa10.52□□□□□ -0.73
SCN8A-203ENST00000545061 MICALL1Q8N3F8 863 aa10.52□□□□□ -0.73
SCN8A-203ENST00000545061 PPP1R1BQ9UD71 204 aaPredicted RBP10.52□□□□□ -0.73
SCN8A-203ENST00000545061 NUF2Q9BZD4 464 aa10.52□□□□□ -0.73
SCN8A-203ENST00000545061 C22orf23Q9BZE7 217 aa10.52□□□□□ -0.73
SCN8A-203ENST00000545061 MKL2Q9ULH7 1088 aa10.52□□□□□ -0.73
SCN8A-203ENST00000545061 DDX27Q96GQ7 796 aaKnown RBP10.51□□□□□ -0.73
SCN8A-203ENST00000545061 CCDC114Q96M63 670 aa10.51□□□□□ -0.73
SCN8A-203ENST00000545061 VCX3AQ9NNX9 186 aa10.51□□□□□ -0.73
SCN8A-203ENST00000545061 RAI14Q9P0K7 980 aa10.51□□□□□ -0.73
SCN8A-203ENST00000545061 DDX19BQ9UMR2 479 aa10.51□□□□□ -0.73
SCN8A-203ENST00000545061 KIF4BQ2VIQ3 1234 aa10.51□□□□□ -0.73
SCN8A-203ENST00000545061 THEGQ9P2T0 379 aa10.51□□□□□ -0.73
SCN8A-203ENST00000545061 ANKRD1Q15327 319 aa10.51□□□□□ -0.73
SCN8A-203ENST00000545061 BICDL2A1A5D9 508 aa10.51□□□□□ -0.73
SCN8A-203ENST00000545061 HDGFP51858 240 aaKnown RBP10.51□□□□□ -0.73
SCN8A-203ENST00000545061 IQCGQ9H095 443 aaKnown RBP10.5□□□□□ -0.73
SCN8A-203ENST00000545061 SPATS2LQ9NUQ6 558 aaKnown RBP10.5□□□□□ -0.73
SCN8A-203ENST00000545061 CCDC171Q6TFL3 1326 aa10.5□□□□□ -0.73
SCN8A-203ENST00000545061 A0A1W2PRG0 241 aa10.5□□□□□ -0.73
SCN8A-203ENST00000545061 MAP2K2P36507 400 aa10.5□□□□□ -0.73
SCN8A-203ENST00000545061 ATAD2Q6PL18 1390 aa10.5□□□□□ -0.73
SCN8A-203ENST00000545061 CLNS1AP54105 237 aaKnown RBP10.5□□□□□ -0.73
SCN8A-203ENST00000545061 GSDMDP57764 484 aa10.5□□□□□ -0.73
SCN8A-203ENST00000545061 NAA16Q6N069 864 aaPredicted RBP10.5□□□□□ -0.73
SCN8A-203ENST00000545061 TMEM132AQ24JP5 1023 aa10.5□□□□□ -0.73
SCN8A-203ENST00000545061 RAB3IPQ96QF0 476 aaPredicted RBP10.5□□□□□ -0.73
SCN8A-203ENST00000545061 ARID3CA6NKF2 412 aa10.5□□□□□ -0.73
SCN8A-203ENST00000545061 IRX4P78413 519 aa10.5□□□□□ -0.73
SCN8A-203ENST00000545061 RUFY3Q7L099 469 aa10.5□□□□□ -0.73
SCN8A-203ENST00000545061 SSX2IPQ9Y2D8 614 aa10.5□□□□□ -0.73
SCN8A-203ENST00000545061 KRT18P05783 430 aaKnown RBP10.5□□□□□ -0.73
SCN8A-203ENST00000545061 PCK1P35558 622 aa10.5□□□□□ -0.73
SCN8A-203ENST00000545061 NGEFQ8N5V2 710 aa10.5□□□□□ -0.73
SCN8A-203ENST00000545061 LUC7L3O95232 432 aaKnown RBP10.5□□□□□ -0.73
SCN8A-203ENST00000545061 PLVAPQ9BX97 442 aa10.5□□□□□ -0.73
SCN8A-203ENST00000545061 HIP1O00291 1037 aa10.49□□□□□ -0.73
SCN8A-203ENST00000545061 TUBBP07437 444 aa10.49□□□□□ -0.73
SCN8A-203ENST00000545061 SATB1Q01826 763 aa10.49□□□□□ -0.73
SCN8A-203ENST00000545061 ERCC6LQ2NKX8 1250 aa10.49□□□□□ -0.73
SCN8A-203ENST00000545061 ARMC9Q7Z3E5 817 aa10.49□□□□□ -0.73
SCN8A-203ENST00000545061 LRRC45Q96CN5 670 aa10.49□□□□□ -0.73
SCN8A-203ENST00000545061 PLEKHG5O94827 1062 aa10.49□□□□□ -0.73
SCN8A-203ENST00000545061 NLRP5P59047 1200 aa10.49□□□□□ -0.73
SCN8A-203ENST00000545061 SLMAPQ14BN4 828 aa10.49□□□□□ -0.73
SCN8A-203ENST00000545061 SLC4A8Q2Y0W8 1093 aa10.49□□□□□ -0.73
SCN8A-203ENST00000545061 NUTM1Q86Y26 1132 aa10.49□□□□□ -0.73
SCN8A-203ENST00000545061 CIB2O75838 187 aa10.49□□□□□ -0.73
SCN8A-203ENST00000545061 PSMC4P43686 418 aa10.49□□□□□ -0.73
SCN8A-203ENST00000545061 HDGFL2Q7Z4V5 671 aaPredicted RBP10.49□□□□□ -0.73
SCN8A-203ENST00000545061 CLIP1P30622 1438 aa10.49□□□□□ -0.73
SCN8A-203ENST00000545061 IL27Q8NEV9 243 aa10.49□□□□□ -0.73
SCN8A-203ENST00000545061 WDR33Q9C0J8 1336 aaKnown RBP10.49□□□□□ -0.73
SCN8A-203ENST00000545061 BUB1BO60566 1050 aaPredicted RBP10.49□□□□□ -0.73
SCN8A-203ENST00000545061 FGFR1OPO95684 399 aaKnown RBP10.49□□□□□ -0.73
SCN8A-203ENST00000545061 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.48□□□□□ -0.73
SCN8A-203ENST00000545061 HVCN1Q96D96 273 aa10.48□□□□□ -0.73
SCN8A-203ENST00000545061 TTC12Q9H892 705 aaPredicted RBP10.48□□□□□ -0.73
SCN8A-203ENST00000545061 TUBB4AP04350 444 aa10.48□□□□□ -0.73
SCN8A-203ENST00000545061 ALDH3A1P30838 453 aa10.48□□□□□ -0.73
SCN8A-203ENST00000545061 TRPC3Q13507 836 aa10.48□□□□□ -0.73
SCN8A-203ENST00000545061 SLC4A10Q6U841 1118 aa10.48□□□□□ -0.73
SCN8A-203ENST00000545061 SMC1BQ8NDV3 1235 aa10.48□□□□□ -0.73
SCN8A-203ENST00000545061 SEC62Q99442 399 aaKnown RBP10.48□□□□□ -0.73
SCN8A-203ENST00000545061 TRIM7Q9C029 511 aa10.48□□□□□ -0.73
SCN8A-203ENST00000545061 KANK1Q14678 1352 aa10.48□□□□□ -0.73
SCN8A-203ENST00000545061 PRC1O43663 620 aa10.48□□□□□ -0.73
SCN8A-203ENST00000545061 PLPPR3Q6T4P5 718 aa10.48□□□□□ -0.73
SCN8A-203ENST00000545061 LRRC23Q53EV4 343 aaPredicted RBP10.48□□□□□ -0.73
SCN8A-203ENST00000545061 CTNNBL1Q8WYA6 563 aaPredicted RBP10.48□□□□□ -0.73
SCN8A-203ENST00000545061 EPSTI1Q96J88 318 aa10.48□□□□□ -0.73
SCN8A-203ENST00000545061 CCDC40Q4G0X9 1142 aa10.48□□□□□ -0.73
SCN8A-203ENST00000545061 PFDN1O60925 122 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms