RNA–Protein interactions for RNA: ENST00000544882.1

SCNN1A-222, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 585 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-222ENST00000544882 MEGF6O75095 1541 aa22.42■■□□□ 1.18
SCNN1A-222ENST00000544882 TXNRD1Q16881 649 aa22.42■■□□□ 1.18
SCNN1A-222ENST00000544882 ZCRB1Q8TBF4 217 aaKnown RBP22.42■■□□□ 1.18
SCNN1A-222ENST00000544882 SHANK3Q9BYB0 1731 aa22.41■■□□□ 1.18
SCNN1A-222ENST00000544882 PPM1GO15355 546 aaPredicted RBP22.41■■□□□ 1.18
SCNN1A-222ENST00000544882 TNNT2P45379 298 aaPredicted RBP22.41■■□□□ 1.18
SCNN1A-222ENST00000544882 ANO8Q9HCE9 1232 aaPredicted RBP22.41■■□□□ 1.18
SCNN1A-222ENST00000544882 BTAF1O14981 1849 aa22.41■■□□□ 1.18
SCNN1A-222ENST00000544882 RAPGEF4Q8WZA2 1011 aa22.4■■□□□ 1.18
SCNN1A-222ENST00000544882 POLKQ9UBT6 870 aa22.4■■□□□ 1.18
SCNN1A-222ENST00000544882 PER1O15534 1290 aaPredicted RBP22.39■■□□□ 1.17
SCNN1A-222ENST00000544882 AMER1Q5JTC6 1135 aaPredicted RBP22.39■■□□□ 1.17
SCNN1A-222ENST00000544882 NSD2O96028 1365 aa22.38■■□□□ 1.17
SCNN1A-222ENST00000544882 TATP17735 454 aaPredicted RBP22.37■■□□□ 1.17
SCNN1A-222ENST00000544882 KNSTRNQ9Y448 316 aa22.36■■□□□ 1.17
SCNN1A-222ENST00000544882 STK32BQ9NY57 414 aa22.35■■□□□ 1.17
SCNN1A-222ENST00000544882 PRIM1P49642 420 aaKnown RBP22.34■■□□□ 1.17
SCNN1A-222ENST00000544882 SYTL4Q96C24 671 aaPredicted RBP22.34■■□□□ 1.17
SCNN1A-222ENST00000544882 DOT1LQ8TEK3 1739 aa22.34■■□□□ 1.17
SCNN1A-222ENST00000544882 NCAPD2Q15021 1401 aa22.32■■□□□ 1.16
SCNN1A-222ENST00000544882 MORC1Q86VD1 984 aa22.32■■□□□ 1.16
SCNN1A-222ENST00000544882 SLC15A2Q16348 729 aa22.31■■□□□ 1.16
SCNN1A-222ENST00000544882 SPON1Q9HCB6 807 aa22.31■■□□□ 1.16
SCNN1A-222ENST00000544882 CASZ1Q86V15 1759 aa22.3■■□□□ 1.16
SCNN1A-222ENST00000544882 PCDH11XQ9BZA7 1347 aa22.3■■□□□ 1.16
SCNN1A-222ENST00000544882 PCDH11YQ9BZA8 1340 aa22.3■■□□□ 1.16
SCNN1A-222ENST00000544882 EYA1Q99502 592 aa22.29■■□□□ 1.16
SCNN1A-222ENST00000544882 PDGFDQ9GZP0 370 aaPredicted RBP22.29■■□□□ 1.16
SCNN1A-222ENST00000544882 EIF4A2Q14240 407 aaKnown RBP22.28■■□□□ 1.16
SCNN1A-222ENST00000544882 CC2D1BQ5T0F9 858 aaKnown RBP22.27■■□□□ 1.16
SCNN1A-222ENST00000544882 LRRC4BQ9NT99 713 aa22.27■■□□□ 1.16
SCNN1A-222ENST00000544882 PAPPAQ13219 1627 aa22.27■■□□□ 1.16
SCNN1A-222ENST00000544882 PKD1L3Q7Z443 1732 aa22.26■■□□□ 1.15
SCNN1A-222ENST00000544882 CYP27B1O15528 508 aa22.26■■□□□ 1.15
SCNN1A-222ENST00000544882 SLC27A3Q5K4L6 730 aa22.26■■□□□ 1.15
SCNN1A-222ENST00000544882 ZBTB7AO95365 584 aa22.25■■□□□ 1.15
SCNN1A-222ENST00000544882 PPP1R1BQ9UD71 204 aaPredicted RBP22.25■■□□□ 1.15
SCNN1A-222ENST00000544882 CNGB1Q14028 1251 aaPredicted RBP22.23■■□□□ 1.15
SCNN1A-222ENST00000544882 ZNF827Q17R98 1081 aa22.23■■□□□ 1.15
SCNN1A-222ENST00000544882 SPG7Q9UQ90 795 aa22.23■■□□□ 1.15
SCNN1A-222ENST00000544882 NPC1L1Q9UHC9 1359 aa22.23■■□□□ 1.15
SCNN1A-222ENST00000544882 LY75O60449 1722 aa22.23■■□□□ 1.15
SCNN1A-222ENST00000544882 KCNQ4P56696 695 aa22.22■■□□□ 1.15
SCNN1A-222ENST00000544882 ATF5Q9Y2D1 282 aaPredicted RBP22.21■■□□□ 1.15
SCNN1A-222ENST00000544882 TOGARAM1Q9Y4F4 1720 aa22.2■■□□□ 1.14
SCNN1A-222ENST00000544882 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.2■■□□□ 1.14
SCNN1A-222ENST00000544882 IGSF1Q8N6C5 1336 aa22.2■■□□□ 1.14
SCNN1A-222ENST00000544882 MPRIPQ6WCQ1 1025 aa22.19■■□□□ 1.14
SCNN1A-222ENST00000544882 AKT1S1Q96B36 256 aa22.19■■□□□ 1.14
SCNN1A-222ENST00000544882 CCNL1Q9UK58 526 aaPredicted RBP22.19■■□□□ 1.14
SCNN1A-222ENST00000544882 ITGB4P16144 1822 aa22.18■■□□□ 1.14
SCNN1A-222ENST00000544882 MTHFSP49914 203 aa22.18■■□□□ 1.14
SCNN1A-222ENST00000544882 NKX1-1Q15270 411 aaPredicted RBP22.18■■□□□ 1.14
SCNN1A-222ENST00000544882 PTGER2P43116 358 aa22.17■■□□□ 1.14
SCNN1A-222ENST00000544882 MTFR1LQ9H019 292 aa22.17■■□□□ 1.14
SCNN1A-222ENST00000544882 IL13P35225 146 aa22.16■■□□□ 1.14
SCNN1A-222ENST00000544882 AEBP1Q8IUX7 1158 aa22.16■■□□□ 1.14
SCNN1A-222ENST00000544882 IFNL2Q8IZJ0 200 aa22.15■■□□□ 1.14
SCNN1A-222ENST00000544882 QSER1Q2KHR3 1735 aa22.14■■□□□ 1.14
SCNN1A-222ENST00000544882 PHKG2P15735 406 aa22.14■■□□□ 1.13
SCNN1A-222ENST00000544882 TFCP2L1Q9NZI6 479 aa22.14■■□□□ 1.13
SCNN1A-222ENST00000544882 COL3A1P02461 1466 aaPredicted RBP22.14■■□□□ 1.13
SCNN1A-222ENST00000544882 PALLDQ8WX93 1383 aa22.13■■□□□ 1.13
SCNN1A-222ENST00000544882 TUBGCP6Q96RT7 1819 aa22.13■■□□□ 1.13
SCNN1A-222ENST00000544882 PIGBQ92521 554 aa22.13■■□□□ 1.13
SCNN1A-222ENST00000544882 PLEKHG2Q9H7P9 1386 aa22.12■■□□□ 1.13
SCNN1A-222ENST00000544882 PNPLA7Q6ZV29 1317 aa22.12■■□□□ 1.13
SCNN1A-222ENST00000544882 SMARCC1Q92922 1105 aaPredicted RBP22.12■■□□□ 1.13
SCNN1A-222ENST00000544882 SGIP1Q9BQI5 828 aa22.11■■□□□ 1.13
SCNN1A-222ENST00000544882 PLEKHO1Q53GL0 409 aaPredicted RBP22.1■■□□□ 1.13
SCNN1A-222ENST00000544882 TMOD3Q9NYL9 352 aa22.1■■□□□ 1.13
SCNN1A-222ENST00000544882 KDRP35968 1356 aa22.1■■□□□ 1.13
SCNN1A-222ENST00000544882 SLC16A10Q8TF71 515 aa22.09■■□□□ 1.13
SCNN1A-222ENST00000544882 C5P01031 1676 aa22.08■■□□□ 1.13
SCNN1A-222ENST00000544882 SULT6B1Q6IMI4 303 aa22.08■■□□□ 1.13
SCNN1A-222ENST00000544882 TAF1LQ8IZX4 1826 aa22.08■■□□□ 1.12
SCNN1A-222ENST00000544882 HMGB2P26583 209 aaKnown RBP22.07■■□□□ 1.12
SCNN1A-222ENST00000544882 ZNF530Q6P9A1 599 aaPredicted RBP22.07■■□□□ 1.12
SCNN1A-222ENST00000544882 HSP90AB1P08238 724 aaKnown RBP22.06■■□□□ 1.12
SCNN1A-222ENST00000544882 AMOTQ4VCS5 1084 aa22.06■■□□□ 1.12
SCNN1A-222ENST00000544882 ARXQ96QS3 562 aa22.06■■□□□ 1.12
SCNN1A-222ENST00000544882 FHDC1Q9C0D6 1143 aaPredicted RBP22.05■■□□□ 1.12
SCNN1A-222ENST00000544882 ASAP1Q9ULH1 1129 aa22.05■■□□□ 1.12
SCNN1A-222ENST00000544882 MSH5O43196 834 aa22.04■■□□□ 1.12
SCNN1A-222ENST00000544882 DIAPH1O60610 1272 aaKnown RBP22.04■■□□□ 1.12
SCNN1A-222ENST00000544882 PPP2R1AP30153 589 aa22.04■■□□□ 1.12
SCNN1A-222ENST00000544882 DCAF8L1A6NGE4 600 aa22.03■■□□□ 1.12
SCNN1A-222ENST00000544882 HMOX1P09601 288 aa22.03■■□□□ 1.12
SCNN1A-222ENST00000544882 COL23A1Q86Y22 540 aaPredicted RBP22.03■■□□□ 1.12
SCNN1A-222ENST00000544882 DCAF5Q96JK2 942 aa22.03■■□□□ 1.12
SCNN1A-222ENST00000544882 LOC102724428A0A0B4J2F2 783 aa22.02■■□□□ 1.12
SCNN1A-222ENST00000544882 ERVV-2B6SEH9 535 aa22.02■■□□□ 1.12
SCNN1A-222ENST00000544882 POLD1P28340 1107 aa22.02■■□□□ 1.12
SCNN1A-222ENST00000544882 SIK1P57059 783 aa22.02■■□□□ 1.12
SCNN1A-222ENST00000544882 C1orf141Q5JVX7 400 aa22.02■■□□□ 1.12
SCNN1A-222ENST00000544882 SYT17Q9BSW7 474 aa22.02■■□□□ 1.12
SCNN1A-222ENST00000544882 C4BP0C0L5 1744 aa22.01■■□□□ 1.11
SCNN1A-222ENST00000544882 COL24A1Q17RW2 1714 aa22.01■■□□□ 1.11
SCNN1A-222ENST00000544882 KDM6AO15550 1401 aaPredicted RBP22.01■■□□□ 1.11
SCNN1A-222ENST00000544882 DDX10Q13206 875 aaKnown RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms