RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 ISY1Q9ULR0 285 aaKnown RBP16.03■□□□□ 0.16
PCMTD1-208ENST00000544451 LRRFIP2Q9Y608 721 aaKnown RBP16.03■□□□□ 0.16
PCMTD1-208ENST00000544451 CEP85Q6P2H3 762 aa16.03■□□□□ 0.16
PCMTD1-208ENST00000544451 PHF23Q9BUL5 403 aaPredicted RBP16.03■□□□□ 0.16
PCMTD1-208ENST00000544451 PPIP5K1Q6PFW1 1433 aa16.02■□□□□ 0.16
PCMTD1-208ENST00000544451 TRPM2O94759 1503 aa16.02■□□□□ 0.16
PCMTD1-208ENST00000544451 PKNOX2Q96KN3 472 aa16.02■□□□□ 0.16
PCMTD1-208ENST00000544451 TSPY26PQ9H489 355 aa16.02■□□□□ 0.16
PCMTD1-208ENST00000544451 DCTPP1Q9H773 170 aa16.02■□□□□ 0.16
PCMTD1-208ENST00000544451 C9orf78Q9NZ63 289 aaPredicted RBP16.02■□□□□ 0.16
PCMTD1-208ENST00000544451 MX1P20591 662 aa16.02■□□□□ 0.15
PCMTD1-208ENST00000544451 FERMT3Q86UX7 667 aa16.02■□□□□ 0.15
PCMTD1-208ENST00000544451 CWC22Q9HCG8 908 aaKnown RBP16.02■□□□□ 0.15
PCMTD1-208ENST00000544451 MADDQ8WXG6 1647 aa16.02■□□□□ 0.15
PCMTD1-208ENST00000544451 HDGFL1Q5TGJ6 251 aa16.01■□□□□ 0.15
PCMTD1-208ENST00000544451 ANKRD44Q8N8A2 993 aa16.01■□□□□ 0.15
PCMTD1-208ENST00000544451 SPG7Q9UQ90 795 aa16.01■□□□□ 0.15
PCMTD1-208ENST00000544451 ZMYND15Q9H091 742 aa16.01■□□□□ 0.15
PCMTD1-208ENST00000544451 SRGAP3O43295 1099 aa16.01■□□□□ 0.15
PCMTD1-208ENST00000544451 PRDM10Q9NQV6 1147 aa16.01■□□□□ 0.15
PCMTD1-208ENST00000544451 RRP9O43818 475 aaKnown RBP16■□□□□ 0.15
PCMTD1-208ENST00000544451 USP25Q9UHP3 1055 aa16■□□□□ 0.15
PCMTD1-208ENST00000544451 CHAF1AQ13111 956 aaPredicted RBP16■□□□□ 0.15
PCMTD1-208ENST00000544451 PHF14O94880 888 aa16■□□□□ 0.15
PCMTD1-208ENST00000544451 PDE1AP54750 535 aa16■□□□□ 0.15
PCMTD1-208ENST00000544451 EIF4A2Q14240 407 aaKnown RBP16■□□□□ 0.15
PCMTD1-208ENST00000544451 FAM177BA6PVY3 158 aa15.99■□□□□ 0.15
PCMTD1-208ENST00000544451 HSP90B1P14625 803 aaKnown RBP15.99■□□□□ 0.15
PCMTD1-208ENST00000544451 TEFQ10587 303 aa15.99■□□□□ 0.15
PCMTD1-208ENST00000544451 ARHGAP45Q92619 1136 aa15.99■□□□□ 0.15
PCMTD1-208ENST00000544451 UNC13BO14795 1591 aa15.99■□□□□ 0.15
PCMTD1-208ENST00000544451 A0A0G2JS52 829 aa15.99■□□□□ 0.15
PCMTD1-208ENST00000544451 CPA1P15085 419 aa15.99■□□□□ 0.15
PCMTD1-208ENST00000544451 STK3Q13188 491 aa15.99■□□□□ 0.15
PCMTD1-208ENST00000544451 SIL1Q9H173 461 aa15.99■□□□□ 0.15
PCMTD1-208ENST00000544451 ZNF330Q9Y3S2 320 aaPredicted RBP15.99■□□□□ 0.15
PCMTD1-208ENST00000544451 TPM2P07951 284 aa15.99■□□□□ 0.15
PCMTD1-208ENST00000544451 GNAI3P08754 354 aa15.99■□□□□ 0.15
PCMTD1-208ENST00000544451 MBD3O95983 291 aa15.98■□□□□ 0.15
PCMTD1-208ENST00000544451 IL13P35225 146 aa15.98■□□□□ 0.15
PCMTD1-208ENST00000544451 CCDC30Q5VVM6 783 aa15.98■□□□□ 0.15
PCMTD1-208ENST00000544451 CCDC39Q9UFE4 941 aa15.98■□□□□ 0.15
PCMTD1-208ENST00000544451 CEBPZQ03701 1054 aaKnown RBP15.98■□□□□ 0.15
PCMTD1-208ENST00000544451 ZNF592Q92610 1267 aa15.98■□□□□ 0.15
PCMTD1-208ENST00000544451 MSH6P52701 1360 aa15.98■□□□□ 0.15
PCMTD1-208ENST00000544451 ABCC1P33527 1531 aa15.97■□□□□ 0.15
PCMTD1-208ENST00000544451 IFIT2P09913 472 aaKnown RBP15.97■□□□□ 0.15
PCMTD1-208ENST00000544451 CCT4P50991 539 aaKnown RBP15.97■□□□□ 0.15
PCMTD1-208ENST00000544451 PPFIA3O75145 1194 aa15.97■□□□□ 0.15
PCMTD1-208ENST00000544451 TCEANC2Q96MN5 208 aa15.97■□□□□ 0.15
PCMTD1-208ENST00000544451 FLIIQ13045 1269 aa15.96■□□□□ 0.15
PCMTD1-208ENST00000544451 CCDC83Q8IWF9 413 aa15.96■□□□□ 0.15
PCMTD1-208ENST00000544451 CAMK4Q16566 473 aa15.96■□□□□ 0.15
PCMTD1-208ENST00000544451 ABTB2Q8N961 1025 aa15.96■□□□□ 0.15
PCMTD1-208ENST00000544451 KIF2CQ99661 725 aa15.96■□□□□ 0.15
PCMTD1-208ENST00000544451 LMBRD1Q9NUN5 540 aa15.95■□□□□ 0.14
PCMTD1-208ENST00000544451 TMEM63CQ9P1W3 806 aa15.95■□□□□ 0.14
PCMTD1-208ENST00000544451 HCLS1P14317 486 aaPredicted RBP15.95■□□□□ 0.14
PCMTD1-208ENST00000544451 ZRSR1Q15695 479 aaKnown RBP15.95■□□□□ 0.14
PCMTD1-208ENST00000544451 C17orf53Q8N3J3 647 aaPredicted RBP15.95■□□□□ 0.14
PCMTD1-208ENST00000544451 ZNF692Q9BU19 519 aaPredicted RBP15.95■□□□□ 0.14
PCMTD1-208ENST00000544451 SBNO2Q9Y2G9 1366 aa15.95■□□□□ 0.14
PCMTD1-208ENST00000544451 CASTP20810 708 aaKnown RBP15.95■□□□□ 0.14
PCMTD1-208ENST00000544451 PALD1Q9ULE6 856 aa15.94■□□□□ 0.14
PCMTD1-208ENST00000544451 NSFL1CQ9UNZ2 370 aaKnown RBP15.94■□□□□ 0.14
PCMTD1-208ENST00000544451 JAKMIP1Q96N16 626 aaKnown RBP15.94■□□□□ 0.14
PCMTD1-208ENST00000544451 MTHFSDQ2M296 383 aaKnown RBP15.93■□□□□ 0.14
PCMTD1-208ENST00000544451 TSC1Q92574 1164 aa15.93■□□□□ 0.14
PCMTD1-208ENST00000544451 TTC12Q9H892 705 aaPredicted RBP15.93■□□□□ 0.14
PCMTD1-208ENST00000544451 ACEP12821 1306 aa15.93■□□□□ 0.14
PCMTD1-208ENST00000544451 YTHDC2Q9H6S0 1430 aaKnown RBP15.93■□□□□ 0.14
PCMTD1-208ENST00000544451 PNMA6EA0A0J9YXQ4 647 aa15.93■□□□□ 0.14
PCMTD1-208ENST00000544451 EID1Q9Y6B2 187 aa15.93■□□□□ 0.14
PCMTD1-208ENST00000544451 BICD2Q8TD16 824 aa15.93■□□□□ 0.14
PCMTD1-208ENST00000544451 CNPY2Q9Y2B0 182 aa15.93■□□□□ 0.14
PCMTD1-208ENST00000544451 ZKSCAN1P17029 563 aaPredicted RBP15.92■□□□□ 0.14
PCMTD1-208ENST00000544451 CEBPAP49715 358 aaPredicted RBP15.92■□□□□ 0.14
PCMTD1-208ENST00000544451 ESYT1Q9BSJ8 1104 aa15.92■□□□□ 0.14
PCMTD1-208ENST00000544451 TAF7Q15545 349 aaPredicted RBP15.92■□□□□ 0.14
PCMTD1-208ENST00000544451 GPT2Q8TD30 523 aa15.92■□□□□ 0.14
PCMTD1-208ENST00000544451 GADD45BO75293 160 aaPredicted RBP15.92■□□□□ 0.14
PCMTD1-208ENST00000544451 CSPP1Q1MSJ5 1256 aa15.92■□□□□ 0.14
PCMTD1-208ENST00000544451 PRPF40BQ6NWY9 871 aaKnown RBP15.92■□□□□ 0.14
PCMTD1-208ENST00000544451 GIMAP6Q6P9H5 292 aa15.92■□□□□ 0.14
PCMTD1-208ENST00000544451 CNTROBQ8N137 903 aa15.92■□□□□ 0.14
PCMTD1-208ENST00000544451 GPATCH3Q96I76 525 aa15.92■□□□□ 0.14
PCMTD1-208ENST00000544451 SRCIN1Q9C0H9 1055 aa15.92■□□□□ 0.14
PCMTD1-208ENST00000544451 WDR33Q9C0J8 1336 aaKnown RBP15.91■□□□□ 0.14
PCMTD1-208ENST00000544451 USP48Q86UV5 1035 aa15.91■□□□□ 0.14
PCMTD1-208ENST00000544451 CLASRPQ8N2M8 674 aaKnown RBP15.91■□□□□ 0.14
PCMTD1-208ENST00000544451 LRSAM1Q6UWE0 723 aa15.91■□□□□ 0.14
PCMTD1-208ENST00000544451 NECAB1Q8N987 351 aa15.91■□□□□ 0.14
PCMTD1-208ENST00000544451 PLXNC1O60486 1568 aa15.91■□□□□ 0.14
PCMTD1-208ENST00000544451 ZFYVE16Q7Z3T8 1539 aa15.91■□□□□ 0.14
PCMTD1-208ENST00000544451 KDM4AO75164 1064 aa15.91■□□□□ 0.14
PCMTD1-208ENST00000544451 PPP1R42Q7Z4L9 355 aa15.91■□□□□ 0.14
PCMTD1-208ENST00000544451 ABCA6Q8N139 1617 aa15.91■□□□□ 0.14
PCMTD1-208ENST00000544451 ABCC4O15439 1325 aa15.9■□□□□ 0.14
PCMTD1-208ENST00000544451 MCM2P49736 904 aa15.9■□□□□ 0.14
PCMTD1-208ENST00000544451 H3BQV1 296 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms