RNA–Protein interactions for RNA: ENST00000544342.1

AL590560.1-203, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene AL590560.1, Length 408 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL590560.1-203ENST00000544342 CARD11Q9BXL7 1154 aa11.37□□□□□ -0.59
AL590560.1-203ENST00000544342 COG3Q96JB2 828 aa11.36□□□□□ -0.59
AL590560.1-203ENST00000544342 A0A1W2PP64 1363 aa11.36□□□□□ -0.59
AL590560.1-203ENST00000544342 CGNL1Q0VF96 1302 aa11.35□□□□□ -0.59
AL590560.1-203ENST00000544342 CEP350Q5VT06 3117 aa11.35□□□□□ -0.59
AL590560.1-203ENST00000544342 MSH5O43196 834 aa11.35□□□□□ -0.59
AL590560.1-203ENST00000544342 AMPHP49418 695 aa11.35□□□□□ -0.59
AL590560.1-203ENST00000544342 LTV1Q96GA3 475 aaPredicted RBP11.35□□□□□ -0.59
AL590560.1-203ENST00000544342 SIN3AQ96ST3 1273 aa11.35□□□□□ -0.59
AL590560.1-203ENST00000544342 SLC12A5Q9H2X9 1139 aa11.35□□□□□ -0.59
AL590560.1-203ENST00000544342 CCNL1Q9UK58 526 aaPredicted RBP11.35□□□□□ -0.59
AL590560.1-203ENST00000544342 USP47Q96K76 1375 aa11.35□□□□□ -0.59
AL590560.1-203ENST00000544342 SMG6Q86US8 1419 aaKnown RBP11.35□□□□□ -0.59
AL590560.1-203ENST00000544342 RGPD2P0DJD1 1756 aa11.34□□□□□ -0.59
AL590560.1-203ENST00000544342 RTL1A6NKG5 1358 aa11.34□□□□□ -0.59
AL590560.1-203ENST00000544342 PRIM1P49642 420 aaKnown RBP11.34□□□□□ -0.59
AL590560.1-203ENST00000544342 FLAD1Q8NFF5 587 aa11.34□□□□□ -0.59
AL590560.1-203ENST00000544342 ZCRB1Q8TBF4 217 aaKnown RBP11.34□□□□□ -0.59
AL590560.1-203ENST00000544342 SHANK3Q9BYB0 1731 aa11.34□□□□□ -0.59
AL590560.1-203ENST00000544342 C5P01031 1676 aa11.33□□□□□ -0.6
AL590560.1-203ENST00000544342 HOXC9P31274 260 aa11.32□□□□□ -0.6
AL590560.1-203ENST00000544342 RAPGEF4Q8WZA2 1011 aa11.32□□□□□ -0.6
AL590560.1-203ENST00000544342 TAF1LQ8IZX4 1826 aa11.32□□□□□ -0.6
AL590560.1-203ENST00000544342 NLGN2Q8NFZ4 835 aa11.31□□□□□ -0.6
AL590560.1-203ENST00000544342 NSD3Q9BZ95 1437 aa11.31□□□□□ -0.6
AL590560.1-203ENST00000544342 MAP3K19Q56UN5 1328 aa11.31□□□□□ -0.6
AL590560.1-203ENST00000544342 NSD2O96028 1365 aa11.3□□□□□ -0.6
AL590560.1-203ENST00000544342 TONSLQ96HA7 1378 aa11.3□□□□□ -0.6
AL590560.1-203ENST00000544342 IFFO2Q5TF58 517 aa11.3□□□□□ -0.6
AL590560.1-203ENST00000544342 CD2APQ9Y5K6 639 aa11.3□□□□□ -0.6
AL590560.1-203ENST00000544342 MEGF6O75095 1541 aa11.3□□□□□ -0.6
AL590560.1-203ENST00000544342 TATP17735 454 aaPredicted RBP11.29□□□□□ -0.6
AL590560.1-203ENST00000544342 KCNQ4P56696 695 aa11.29□□□□□ -0.6
AL590560.1-203ENST00000544342 COL23A1Q86Y22 540 aaPredicted RBP11.29□□□□□ -0.6
AL590560.1-203ENST00000544342 GPBP1L1Q9HC44 474 aaPredicted RBP11.29□□□□□ -0.6
AL590560.1-203ENST00000544342 PCDH11XQ9BZA7 1347 aa11.29□□□□□ -0.6
AL590560.1-203ENST00000544342 PCDH11YQ9BZA8 1340 aa11.29□□□□□ -0.6
AL590560.1-203ENST00000544342 YBX3P16989 372 aaKnown RBP eCLIP11.28□□□□□ -0.6
AL590560.1-203ENST00000544342 SMARCC1Q92922 1105 aaPredicted RBP11.28□□□□□ -0.6
AL590560.1-203ENST00000544342 ITGB4P16144 1822 aa11.28□□□□□ -0.6
AL590560.1-203ENST00000544342 ATP10DQ9P241 1426 aa11.27□□□□□ -0.6
AL590560.1-203ENST00000544342 KIF20BQ96Q89 1820 aa11.27□□□□□ -0.61
AL590560.1-203ENST00000544342 KIF24Q5T7B8 1368 aa11.27□□□□□ -0.61
AL590560.1-203ENST00000544342 PALLDQ8WX93 1383 aa11.27□□□□□ -0.61
AL590560.1-203ENST00000544342 C4BP0C0L5 1744 aa11.26□□□□□ -0.61
AL590560.1-203ENST00000544342 MSL1Q68DK7 614 aa11.26□□□□□ -0.61
AL590560.1-203ENST00000544342 AK7Q96M32 723 aa11.26□□□□□ -0.61
AL590560.1-203ENST00000544342 UBR3Q6ZT12 1888 aa11.25□□□□□ -0.61
AL590560.1-203ENST00000544342 NBPF6Q5VWK0 638 aa11.25□□□□□ -0.61
AL590560.1-203ENST00000544342 NBPF4Q96M43 638 aa11.25□□□□□ -0.61
AL590560.1-203ENST00000544342 INSRP06213 1382 aa11.25□□□□□ -0.61
AL590560.1-203ENST00000544342 FLT4P35916 1363 aa11.25□□□□□ -0.61
AL590560.1-203ENST00000544342 RRS1Q15050 365 aaKnown RBP11.24□□□□□ -0.61
AL590560.1-203ENST00000544342 CDCA8Q53HL2 280 aa11.24□□□□□ -0.61
AL590560.1-203ENST00000544342 MPRIPQ6WCQ1 1025 aa11.24□□□□□ -0.61
AL590560.1-203ENST00000544342 PKD1L3Q7Z443 1732 aa11.23□□□□□ -0.61
AL590560.1-203ENST00000544342 ST20-MTHFSA0A0A6YYL1 179 aa11.23□□□□□ -0.61
AL590560.1-203ENST00000544342 HSPA6P17066 643 aa11.23□□□□□ -0.61
AL590560.1-203ENST00000544342 TMF1P82094 1093 aa11.23□□□□□ -0.61
AL590560.1-203ENST00000544342 USHBP1Q8N6Y0 703 aa11.23□□□□□ -0.61
AL590560.1-203ENST00000544342 TESK2Q96S53 571 aa11.23□□□□□ -0.61
AL590560.1-203ENST00000544342 ADCY9O60503 1353 aa11.23□□□□□ -0.61
AL590560.1-203ENST00000544342 FYB1O15117 783 aa11.22□□□□□ -0.61
AL590560.1-203ENST00000544342 SSFA2P28290 1259 aa11.22□□□□□ -0.61
AL590560.1-203ENST00000544342 IGSF1Q8N6C5 1336 aa11.22□□□□□ -0.61
AL590560.1-203ENST00000544342 GGNBP2Q9H3C7 697 aa11.22□□□□□ -0.61
AL590560.1-203ENST00000544342 TOGARAM1Q9Y4F4 1720 aa11.21□□□□□ -0.61
AL590560.1-203ENST00000544342 FBLN1P23142 703 aa11.21□□□□□ -0.61
AL590560.1-203ENST00000544342 SPG7Q9UQ90 795 aa11.21□□□□□ -0.61
AL590560.1-203ENST00000544342 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.2□□□□□ -0.62
AL590560.1-203ENST00000544342 HSP90AB2PQ58FF8 381 aa11.2□□□□□ -0.62
AL590560.1-203ENST00000544342 ZNF526Q8TF50 670 aaPredicted RBP11.2□□□□□ -0.62
AL590560.1-203ENST00000544342 MAP2P11137 1827 aaKnown RBP11.19□□□□□ -0.62
AL590560.1-203ENST00000544342 KIF13BQ9NQT8 1826 aa11.19□□□□□ -0.62
AL590560.1-203ENST00000544342 CYP27B1O15528 508 aa11.19□□□□□ -0.62
AL590560.1-203ENST00000544342 PHF14O94880 888 aa11.19□□□□□ -0.62
AL590560.1-203ENST00000544342 CICQ96RK0 1608 aaPredicted RBP11.18□□□□□ -0.62
AL590560.1-203ENST00000544342 LOC102724428A0A0B4J2F2 783 aa11.18□□□□□ -0.62
AL590560.1-203ENST00000544342 ZEB1P37275 1124 aaPredicted RBP11.18□□□□□ -0.62
AL590560.1-203ENST00000544342 SIK1P57059 783 aa11.18□□□□□ -0.62
AL590560.1-203ENST00000544342 NKX1-1Q15270 411 aaPredicted RBP11.18□□□□□ -0.62
AL590560.1-203ENST00000544342 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.18□□□□□ -0.62
AL590560.1-203ENST00000544342 TMOD3Q9NYL9 352 aa11.18□□□□□ -0.62
AL590560.1-203ENST00000544342 ANKRD26Q9UPS8 1709 aa11.18□□□□□ -0.62
AL590560.1-203ENST00000544342 APLP1P51693 650 aa11.17□□□□□ -0.62
AL590560.1-203ENST00000544342 PIGBQ92521 554 aa11.17□□□□□ -0.62
AL590560.1-203ENST00000544342 NCAPD2Q15021 1401 aa11.17□□□□□ -0.62
AL590560.1-203ENST00000544342 PLEKHG2Q9H7P9 1386 aa11.16□□□□□ -0.62
AL590560.1-203ENST00000544342 GNPATO15228 680 aa11.16□□□□□ -0.62
AL590560.1-203ENST00000544342 ZNF831Q5JPB2 1677 aa11.16□□□□□ -0.62
AL590560.1-203ENST00000544342 PPM1GO15355 546 aaPredicted RBP11.15□□□□□ -0.62
AL590560.1-203ENST00000544342 ATP6V1AP38606 617 aa11.15□□□□□ -0.62
AL590560.1-203ENST00000544342 TGFB2P61812 414 aa11.15□□□□□ -0.62
AL590560.1-203ENST00000544342 IFNL2Q8IZJ0 200 aa11.15□□□□□ -0.62
AL590560.1-203ENST00000544342 N4BP2Q86UW6 1770 aaPredicted RBP11.15□□□□□ -0.62
AL590560.1-203ENST00000544342 KIF3CO14782 793 aa11.14□□□□□ -0.63
AL590560.1-203ENST00000544342 TOMM70O94826 608 aa11.14□□□□□ -0.63
AL590560.1-203ENST00000544342 MMP10P09238 476 aa11.14□□□□□ -0.63
AL590560.1-203ENST00000544342 ADRA2BP18089 450 aa11.14□□□□□ -0.63
AL590560.1-203ENST00000544342 NLGN1Q8N2Q7 840 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms